RNA–Protein interactions for RNA: ENST00000635193.1

COL11A1-211, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL11A1, Length 5,289 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-211ENST00000635193 CCDC63Q8NA47 563 aa13.06□□□□□ -0.32
COL11A1-211ENST00000635193 EYA1Q99502 592 aa13.06□□□□□ -0.32
COL11A1-211ENST00000635193 PPFIA4O75335 1185 aa13.06□□□□□ -0.32
COL11A1-211ENST00000635193 PPP1R2P41236 205 aa13.06□□□□□ -0.32
COL11A1-211ENST00000635193 SND1Q7KZF4 910 aaKnown RBP eCLIP13.06□□□□□ -0.32
COL11A1-211ENST00000635193 CEP120Q8N960 986 aa13.06□□□□□ -0.32
COL11A1-211ENST00000635193 MIGA1Q8NAN2 632 aa13.06□□□□□ -0.32
COL11A1-211ENST00000635193 JAK2O60674 1132 aa13.06□□□□□ -0.32
COL11A1-211ENST00000635193 VSIG1Q86XK7 387 aa13.06□□□□□ -0.32
COL11A1-211ENST00000635193 SPATS2Q86XZ4 545 aaKnown RBP13.06□□□□□ -0.32
COL11A1-211ENST00000635193 SECISBP2LQ93073 1101 aaKnown RBP13.06□□□□□ -0.32
COL11A1-211ENST00000635193 ZKSCAN3Q9BRR0 538 aa13.06□□□□□ -0.32
COL11A1-211ENST00000635193 RRP15Q9Y3B9 282 aaKnown RBP13.06□□□□□ -0.32
COL11A1-211ENST00000635193 DEXIO95424 95 aa13.06□□□□□ -0.32
COL11A1-211ENST00000635193 ZNF853P0CG23 659 aa13.06□□□□□ -0.32
COL11A1-211ENST00000635193 LRMPQ12912 555 aa13.06□□□□□ -0.32
COL11A1-211ENST00000635193 PPP1R7Q15435 360 aa13.06□□□□□ -0.32
COL11A1-211ENST00000635193 TNNI3KQ59H18 835 aa13.06□□□□□ -0.32
COL11A1-211ENST00000635193 RAB3IL1Q8TBN0 382 aa13.06□□□□□ -0.32
COL11A1-211ENST00000635193 TMEM87BQ96K49 555 aa13.06□□□□□ -0.32
COL11A1-211ENST00000635193 FERMT1Q9BQL6 677 aa13.06□□□□□ -0.32
COL11A1-211ENST00000635193 FPGT-TNNI3KV9GXZ4 949 aa13.06□□□□□ -0.32
COL11A1-211ENST00000635193 GJC1P36383 396 aa13.05□□□□□ -0.32
COL11A1-211ENST00000635193 GNGT1P63211 74 aa13.05□□□□□ -0.32
COL11A1-211ENST00000635193 TM6SF1Q9BZW5 370 aa13.05□□□□□ -0.32
COL11A1-211ENST00000635193 DENND4BO75064 1496 aaPredicted RBP13.05□□□□□ -0.32
COL11A1-211ENST00000635193 SLC8A1P32418 973 aa13.05□□□□□ -0.32
COL11A1-211ENST00000635193 RRP36Q96EU6 259 aaKnown RBP13.05□□□□□ -0.32
COL11A1-211ENST00000635193 B4E1Z4 1266 aa13.05□□□□□ -0.32
COL11A1-211ENST00000635193 EXOC5O00471 708 aa13.05□□□□□ -0.32
COL11A1-211ENST00000635193 PEX19P40855 299 aa13.05□□□□□ -0.32
COL11A1-211ENST00000635193 PAK1Q13153 545 aa13.05□□□□□ -0.32
COL11A1-211ENST00000635193 ME3Q16798 604 aa13.05□□□□□ -0.32
COL11A1-211ENST00000635193 CCDC97Q96F63 343 aaPredicted RBP13.05□□□□□ -0.32
COL11A1-211ENST00000635193 EFCAB8A8MWE9 144 aa13.05□□□□□ -0.32
COL11A1-211ENST00000635193 RNF10Q8N5U6 811 aaKnown RBP13.05□□□□□ -0.32
COL11A1-211ENST00000635193 SPATS2LQ9NUQ6 558 aaKnown RBP13.05□□□□□ -0.32
COL11A1-211ENST00000635193 MTUS1Q9ULD2 1270 aa13.05□□□□□ -0.32
COL11A1-211ENST00000635193 EEF2P13639 858 aaKnown RBP13.04□□□□□ -0.32
COL11A1-211ENST00000635193 GNA11P29992 359 aa13.04□□□□□ -0.32
COL11A1-211ENST00000635193 PLCD1P51178 756 aa13.04□□□□□ -0.32
COL11A1-211ENST00000635193 PAK2Q13177 524 aa13.04□□□□□ -0.32
COL11A1-211ENST00000635193 LONRF3Q496Y0 759 aa13.04□□□□□ -0.32
COL11A1-211ENST00000635193 FYB2Q5VWT5 728 aa13.04□□□□□ -0.32
COL11A1-211ENST00000635193 EFCC1Q9HA90 598 aa13.04□□□□□ -0.32
COL11A1-211ENST00000635193 RIPOR2Q9Y4F9 1068 aa13.04□□□□□ -0.32
COL11A1-211ENST00000635193 CHL1O00533 1208 aa13.04□□□□□ -0.32
COL11A1-211ENST00000635193 KRT9P35527 623 aa13.04□□□□□ -0.32
COL11A1-211ENST00000635193 RAPGEF1Q13905 1077 aa13.04□□□□□ -0.32
COL11A1-211ENST00000635193 ARHGEF2Q92974 986 aaKnown RBP13.04□□□□□ -0.32
COL11A1-211ENST00000635193 ANGEL1Q9UNK9 670 aaKnown RBP13.04□□□□□ -0.32
COL11A1-211ENST00000635193 ATP6V0A2Q9Y487 856 aa13.04□□□□□ -0.32
COL11A1-211ENST00000635193 KIF24Q5T7B8 1368 aa13.04□□□□□ -0.32
COL11A1-211ENST00000635193 ATP10BO94823 1461 aa13.04□□□□□ -0.32
COL11A1-211ENST00000635193 PLCH2O75038 1416 aa13.04□□□□□ -0.32
COL11A1-211ENST00000635193 SSH2Q76I76 1423 aa13.04□□□□□ -0.32
COL11A1-211ENST00000635193 IL13P35225 146 aa13.04□□□□□ -0.32
COL11A1-211ENST00000635193 TNNI2P48788 182 aa13.04□□□□□ -0.32
COL11A1-211ENST00000635193 PDE4DQ08499 809 aa13.04□□□□□ -0.32
COL11A1-211ENST00000635193 POSTNQ15063 836 aa13.04□□□□□ -0.32
COL11A1-211ENST00000635193 MAP7D1Q3KQU3 841 aa13.04□□□□□ -0.32
COL11A1-211ENST00000635193 SV2BQ7L1I2 683 aa13.04□□□□□ -0.32
COL11A1-211ENST00000635193 RPUSD2Q8IZ73 545 aaKnown RBP13.04□□□□□ -0.32
COL11A1-211ENST00000635193 MCUR1Q96AQ8 359 aa13.04□□□□□ -0.32
COL11A1-211ENST00000635193 TACO1Q9BSH4 297 aaKnown RBP13.04□□□□□ -0.32
COL11A1-211ENST00000635193 MAPK8IP1Q9UQF2 711 aa13.04□□□□□ -0.32
COL11A1-211ENST00000635193 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.04□□□□□ -0.32
COL11A1-211ENST00000635193 A2MP01023 1474 aa13.04□□□□□ -0.32
COL11A1-211ENST00000635193 RBBP5Q15291 538 aaKnown RBP13.04□□□□□ -0.32
COL11A1-211ENST00000635193 CHRNA2Q15822 529 aa13.04□□□□□ -0.32
COL11A1-211ENST00000635193 DIS3L2Q8IYB7 885 aaKnown RBP13.04□□□□□ -0.32
COL11A1-211ENST00000635193 NUP58Q9BVL2 599 aa13.04□□□□□ -0.32
COL11A1-211ENST00000635193 RFC1P35251 1148 aaPredicted RBP13.04□□□□□ -0.32
COL11A1-211ENST00000635193 GBP5Q96PP8 586 aa13.04□□□□□ -0.32
COL11A1-211ENST00000635193 DBNDD2Q9BQY9 259 aa13.04□□□□□ -0.32
COL11A1-211ENST00000635193 SYNCQ9H7C4 482 aa13.04□□□□□ -0.32
COL11A1-211ENST00000635193 VEZTQ9HBM0 779 aa13.04□□□□□ -0.32
COL11A1-211ENST00000635193 PPP1R1BQ9UD71 204 aaPredicted RBP13.04□□□□□ -0.32
COL11A1-211ENST00000635193 TRAF5O00463 557 aa13.03□□□□□ -0.32
COL11A1-211ENST00000635193 CASQ2O14958 399 aaPredicted RBP13.03□□□□□ -0.32
COL11A1-211ENST00000635193 NR1I2O75469 434 aa13.03□□□□□ -0.32
COL11A1-211ENST00000635193 PSMC4P43686 418 aa13.03□□□□□ -0.32
COL11A1-211ENST00000635193 PLCB3Q01970 1234 aa13.03□□□□□ -0.32
COL11A1-211ENST00000635193 LRRC8AQ8IWT6 810 aa13.03□□□□□ -0.32
COL11A1-211ENST00000635193 CSGALNACT2Q8N6G5 542 aa13.03□□□□□ -0.32
COL11A1-211ENST00000635193 BCAS4Q8TDM0 211 aa13.03□□□□□ -0.32
COL11A1-211ENST00000635193 NOX5Q96PH1 765 aa13.03□□□□□ -0.32
COL11A1-211ENST00000635193 RNASE9P60153 205 aaKnown RBP13.03□□□□□ -0.32
COL11A1-211ENST00000635193 SEL1L2Q5TEA6 688 aa13.03□□□□□ -0.32
COL11A1-211ENST00000635193 HS2ST1Q7LGA3 356 aa13.03□□□□□ -0.32
COL11A1-211ENST00000635193 CROCCP2Q86T23 111 aa13.03□□□□□ -0.32
COL11A1-211ENST00000635193 NFATC2IPQ8NCF5 419 aa13.03□□□□□ -0.32
COL11A1-211ENST00000635193 LRRC59Q96AG4 307 aaKnown RBP13.03□□□□□ -0.32
COL11A1-211ENST00000635193 SLF1Q9BQI6 1058 aa13.03□□□□□ -0.32
COL11A1-211ENST00000635193 FAM13AO94988 1023 aa13.03□□□□□ -0.32
COL11A1-211ENST00000635193 MBD4O95243 580 aa13.03□□□□□ -0.32
COL11A1-211ENST00000635193 TIMM10P62072 90 aa13.03□□□□□ -0.32
COL11A1-211ENST00000635193 TAB2Q9NYJ8 693 aa13.03□□□□□ -0.32
COL11A1-211ENST00000635193 HGSO14964 777 aaPredicted RBP13.03□□□□□ -0.32
COL11A1-211ENST00000635193 TPD52P55327 224 aaPredicted RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms