RNA–Protein interactions for RNA: ENST00000631006.2

SRGAP1-207, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SRGAP1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-207ENST00000631006 GNPTABQ3T906 1256 aa7.17□□□□□ -1.26
SRGAP1-207ENST00000631006 DCUN1D2Q6PH85 259 aa7.17□□□□□ -1.26
SRGAP1-207ENST00000631006 MRRFQ96E11 262 aaKnown RBP7.17□□□□□ -1.26
SRGAP1-207ENST00000631006 CCDC94Q9BW85 323 aaPredicted RBP7.17□□□□□ -1.26
SRGAP1-207ENST00000631006 SYNJ1O43426 1573 aa7.17□□□□□ -1.26
SRGAP1-207ENST00000631006 CTAGE9A4FU28 777 aa7.17□□□□□ -1.26
SRGAP1-207ENST00000631006 TRAF5O00463 557 aa7.17□□□□□ -1.26
SRGAP1-207ENST00000631006 CAPN9O14815 690 aa7.17□□□□□ -1.26
SRGAP1-207ENST00000631006 PFDN6O15212 129 aa7.17□□□□□ -1.26
SRGAP1-207ENST00000631006 MYCP01106 439 aaPredicted RBP7.17□□□□□ -1.26
SRGAP1-207ENST00000631006 ATP5DP30049 168 aa7.17□□□□□ -1.26
SRGAP1-207ENST00000631006 ATRIPQ8WXE1 791 aa7.17□□□□□ -1.26
SRGAP1-207ENST00000631006 CAPZA3Q96KX2 299 aa7.17□□□□□ -1.26
SRGAP1-207ENST00000631006 USTQ9Y2C2 406 aa7.17□□□□□ -1.26
SRGAP1-207ENST00000631006 ABCC5O15440 1437 aa7.17□□□□□ -1.26
SRGAP1-207ENST00000631006 HMGB1P1B2RPK0 211 aaPredicted RBP7.17□□□□□ -1.26
SRGAP1-207ENST00000631006 OSBPP22059 807 aa7.17□□□□□ -1.26
SRGAP1-207ENST00000631006 ATP6V1E1P36543 226 aa7.17□□□□□ -1.26
SRGAP1-207ENST00000631006 SLC1A4P43007 532 aa7.17□□□□□ -1.26
SRGAP1-207ENST00000631006 WDR66Q8TBY9 1149 aa7.17□□□□□ -1.26
SRGAP1-207ENST00000631006 C19orf44Q9H6X5 657 aa7.17□□□□□ -1.26
SRGAP1-207ENST00000631006 NESP48681 1621 aa7.17□□□□□ -1.26
SRGAP1-207ENST00000631006 SORBS3O60504 671 aa7.17□□□□□ -1.26
SRGAP1-207ENST00000631006 IDI1Q13907 227 aa7.17□□□□□ -1.26
SRGAP1-207ENST00000631006 NECAB1Q8N987 351 aa7.17□□□□□ -1.26
SRGAP1-207ENST00000631006 GANCQ8TET4 914 aa7.17□□□□□ -1.26
SRGAP1-207ENST00000631006 MRPS27Q92552 414 aaKnown RBP7.17□□□□□ -1.26
SRGAP1-207ENST00000631006 AP5M1Q9H0R1 490 aa7.17□□□□□ -1.26
SRGAP1-207ENST00000631006 ITM2BQ9Y287 266 aa7.17□□□□□ -1.26
SRGAP1-207ENST00000631006 NSD2O96028 1365 aa7.17□□□□□ -1.26
SRGAP1-207ENST00000631006 NOS1P29475 1434 aa7.16□□□□□ -1.26
SRGAP1-207ENST00000631006 ZNF165P49910 485 aa7.16□□□□□ -1.26
SRGAP1-207ENST00000631006 DPP9Q86TI2 863 aa7.16□□□□□ -1.26
SRGAP1-207ENST00000631006 RYBPQ8N488 228 aaPredicted RBP7.16□□□□□ -1.26
SRGAP1-207ENST00000631006 RPS6KC1Q96S38 1066 aa7.16□□□□□ -1.26
SRGAP1-207ENST00000631006 SEPT6Q14141 434 aa7.16□□□□□ -1.26
SRGAP1-207ENST00000631006 SKIV2LQ15477 1246 aaKnown RBP7.16□□□□□ -1.26
SRGAP1-207ENST00000631006 FLAD1Q8NFF5 587 aa7.16□□□□□ -1.26
SRGAP1-207ENST00000631006 DEPTORQ8TB45 409 aa7.16□□□□□ -1.26
SRGAP1-207ENST00000631006 GCNAQ96QF7 691 aa7.16□□□□□ -1.26
SRGAP1-207ENST00000631006 NKTRP30414 1462 aaKnown RBP7.16□□□□□ -1.26
SRGAP1-207ENST00000631006 CCDC171Q6TFL3 1326 aa7.16□□□□□ -1.26
SRGAP1-207ENST00000631006 GOLGA8CPA6NN73 597 aa7.16□□□□□ -1.26
SRGAP1-207ENST00000631006 MBD4O95243 580 aa7.16□□□□□ -1.26
SRGAP1-207ENST00000631006 HS1BP3Q53T59 392 aa7.16□□□□□ -1.26
SRGAP1-207ENST00000631006 FYB2Q5VWT5 728 aa7.16□□□□□ -1.26
SRGAP1-207ENST00000631006 IFT81Q8WYA0 676 aa7.16□□□□□ -1.26
SRGAP1-207ENST00000631006 DCAF5Q96JK2 942 aa7.16□□□□□ -1.26
SRGAP1-207ENST00000631006 TRIM56Q9BRZ2 755 aaKnown RBP7.16□□□□□ -1.26
SRGAP1-207ENST00000631006 RTL1A6NKG5 1358 aa7.16□□□□□ -1.26
SRGAP1-207ENST00000631006 PPIP5K1Q6PFW1 1433 aa7.16□□□□□ -1.26
SRGAP1-207ENST00000631006 RARSP54136 660 aaKnown RBP7.16□□□□□ -1.26
SRGAP1-207ENST00000631006 PDE4DQ08499 809 aa7.16□□□□□ -1.26
SRGAP1-207ENST00000631006 PPFIA1Q13136 1202 aa7.16□□□□□ -1.26
SRGAP1-207ENST00000631006 VWA3BQ502W6 1294 aa7.16□□□□□ -1.26
SRGAP1-207ENST00000631006 GDPD2Q9HCC8 539 aa7.16□□□□□ -1.26
SRGAP1-207ENST00000631006 ZNF277Q9NRM2 450 aaPredicted RBP7.16□□□□□ -1.26
SRGAP1-207ENST00000631006 NCOA1Q15788 1441 aa7.16□□□□□ -1.26
SRGAP1-207ENST00000631006 SPDYE2BA6NHP3 402 aa7.16□□□□□ -1.26
SRGAP1-207ENST00000631006 CFBP00751 764 aa7.16□□□□□ -1.26
SRGAP1-207ENST00000631006 SPDYE6P0CI01 402 aa7.16□□□□□ -1.26
SRGAP1-207ENST00000631006 PDE6AP16499 860 aa7.16□□□□□ -1.26
SRGAP1-207ENST00000631006 MAN1A1P33908 653 aa7.16□□□□□ -1.26
SRGAP1-207ENST00000631006 TNNC1P63316 161 aa7.16□□□□□ -1.26
SRGAP1-207ENST00000631006 ZBTB8OSQ8IWT0 167 aa7.16□□□□□ -1.26
SRGAP1-207ENST00000631006 MYCT1Q8N699 235 aa7.16□□□□□ -1.26
SRGAP1-207ENST00000631006 UBL4BQ8N7F7 174 aa7.16□□□□□ -1.26
SRGAP1-207ENST00000631006 UBLCP1Q8WVY7 318 aaPredicted RBP7.16□□□□□ -1.26
SRGAP1-207ENST00000631006 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.16□□□□□ -1.26
SRGAP1-207ENST00000631006 NKIRAS1Q9NYS0 192 aa7.16□□□□□ -1.26
SRGAP1-207ENST00000631006 RBM8AQ9Y5S9 174 aaKnown RBP7.16□□□□□ -1.26
SRGAP1-207ENST00000631006 PLCD1P51178 756 aa7.16□□□□□ -1.26
SRGAP1-207ENST00000631006 C1orf228Q6PIY5 440 aa7.16□□□□□ -1.26
SRGAP1-207ENST00000631006 TRIM50Q86XT4 487 aa7.16□□□□□ -1.26
SRGAP1-207ENST00000631006 ADPGKQ9BRR6 497 aa7.16□□□□□ -1.26
SRGAP1-207ENST00000631006 MAGI1Q96QZ7 1491 aaPredicted RBP7.16□□□□□ -1.26
SRGAP1-207ENST00000631006 C11orf95C9JLR9 678 aaPredicted RBP7.16□□□□□ -1.26
SRGAP1-207ENST00000631006 ADCY7P51828 1080 aa7.16□□□□□ -1.26
SRGAP1-207ENST00000631006 UBE2HP62256 183 aa7.16□□□□□ -1.26
SRGAP1-207ENST00000631006 MICAL1Q8TDZ2 1067 aa7.16□□□□□ -1.26
SRGAP1-207ENST00000631006 ZBED2Q9BTP6 218 aa7.16□□□□□ -1.26
SRGAP1-207ENST00000631006 TLDC2A0PJX2 215 aa7.15□□□□□ -1.26
SRGAP1-207ENST00000631006 CAVIN2O95810 425 aa7.15□□□□□ -1.26
SRGAP1-207ENST00000631006 ASIC2Q16515 512 aa7.15□□□□□ -1.26
SRGAP1-207ENST00000631006 SEPT14Q6ZU15 432 aa7.15□□□□□ -1.26
SRGAP1-207ENST00000631006 C2CD5Q86YS7 1000 aa7.15□□□□□ -1.26
SRGAP1-207ENST00000631006 CCDC26Q8TAB7 109 aa7.15□□□□□ -1.26
SRGAP1-207ENST00000631006 ZRANB1Q9UGI0 708 aa7.15□□□□□ -1.26
SRGAP1-207ENST00000631006 KCNG1Q9UIX4 513 aa7.15□□□□□ -1.26
SRGAP1-207ENST00000631006 EIF4G3O43432 1585 aaKnown RBP7.15□□□□□ -1.26
SRGAP1-207ENST00000631006 TFCP2Q12800 502 aa7.15□□□□□ -1.26
SRGAP1-207ENST00000631006 NMIQ13287 307 aaPredicted RBP7.15□□□□□ -1.26
SRGAP1-207ENST00000631006 KRT81Q14533 505 aa7.15□□□□□ -1.26
SRGAP1-207ENST00000631006 ZNF174Q15697 407 aa7.15□□□□□ -1.26
SRGAP1-207ENST00000631006 IPO4Q8TEX9 1081 aaKnown RBP7.15□□□□□ -1.26
SRGAP1-207ENST00000631006 KIF21AQ7Z4S6 1674 aa7.15□□□□□ -1.26
SRGAP1-207ENST00000631006 ADCY5O95622 1261 aa7.15□□□□□ -1.26
SRGAP1-207ENST00000631006 S100BP04271 92 aaPredicted RBP7.15□□□□□ -1.26
SRGAP1-207ENST00000631006 PSMD6Q15008 389 aa7.15□□□□□ -1.26
SRGAP1-207ENST00000631006 CNNM4Q6P4Q7 775 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms