RNA–Protein interactions for RNA: ENST00000630907.2

UBE3A-222, Transcript of ubiquitin protein ligase E3A, human

TSL 5

Gene UBE3A, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE3A-222	ENST00000630907	TEPSIN	Q96N21	525 aa		31.27	■■■□□ 2.6
UBE3A-222	ENST00000630907	OSBPL5	Q9H0X9	879 aa	Predicted RBP	31.27	■■■□□ 2.6
UBE3A-222	ENST00000630907	AK9	Q5TCS8	1911 aa		31.27	■■■□□ 2.6
UBE3A-222	ENST00000630907	FLT1	P17948	1338 aa		31.26	■■■□□ 2.6
UBE3A-222	ENST00000630907	SUPT20HL1	Q3ZLR7	823 aa		31.26	■■■□□ 2.59
UBE3A-222	ENST00000630907	MCMDC2	Q4G0Z9	681 aa		31.26	■■■□□ 2.59
UBE3A-222	ENST00000630907	NBPF12	Q5TAG4	269 aa	Predicted RBP	31.26	■■■□□ 2.59
UBE3A-222	ENST00000630907	ZNF408	Q9H9D4	720 aa		31.26	■■■□□ 2.59
UBE3A-222	ENST00000630907	SLC4A4	Q9Y6R1	1079 aa		31.26	■■■□□ 2.59
UBE3A-222	ENST00000630907		A0A0D9SFI3	127 aa		31.25	■■■□□ 2.59
UBE3A-222	ENST00000630907	PRKAB2	O43741	272 aa		31.25	■■■□□ 2.59
UBE3A-222	ENST00000630907	NF2	P35240	595 aa		31.25	■■■□□ 2.59
UBE3A-222	ENST00000630907	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	31.25	■■■□□ 2.59
UBE3A-222	ENST00000630907	RPAP1	Q9BWH6	1393 aa	Predicted RBP	31.25	■■■□□ 2.59
UBE3A-222	ENST00000630907	CELF2	O95319	508 aa	Known RBP	31.24	■■■□□ 2.59
UBE3A-222	ENST00000630907	C1QTNF8	P60827	252 aa		31.24	■■■□□ 2.59
UBE3A-222	ENST00000630907	CDAN1	Q8IWY9	1227 aa		31.24	■■■□□ 2.59
UBE3A-222	ENST00000630907	SDR42E1	Q8WUS8	393 aa		31.24	■■■□□ 2.59
UBE3A-222	ENST00000630907	GNAT2	P19087	354 aa		31.23	■■■□□ 2.59
UBE3A-222	ENST00000630907	CWC27	Q6UX04	472 aa	Known RBP	31.23	■■■□□ 2.59
UBE3A-222	ENST00000630907	CCDC129	Q6ZRS4	1044 aa		31.23	■■■□□ 2.59
UBE3A-222	ENST00000630907	SH3BP5L	Q7L8J4	393 aa		31.23	■■■□□ 2.59
UBE3A-222	ENST00000630907	CHML	P26374	656 aa		31.22	■■■□□ 2.59
UBE3A-222	ENST00000630907	ATP8A2	Q9NTI2	1148 aa		31.22	■■■□□ 2.59
UBE3A-222	ENST00000630907	DDTL	A6NHG4	134 aa	Predicted RBP	31.21	■■■□□ 2.59
UBE3A-222	ENST00000630907	CST9	Q5W186	159 aa		31.21	■■■□□ 2.59
UBE3A-222	ENST00000630907	HOOK2	Q96ED9	719 aa		31.21	■■■□□ 2.59
UBE3A-222	ENST00000630907	DCP1A	Q9NPI6	582 aa	Predicted RBP	31.21	■■■□□ 2.59
UBE3A-222	ENST00000630907	MKRN1	Q9UHC7	482 aa	Known RBP	31.21	■■■□□ 2.59
UBE3A-222	ENST00000630907	SAP30BP	Q9UHR5	308 aa	Known RBP	31.21	■■■□□ 2.59
UBE3A-222	ENST00000630907	DDRGK1	Q96HY6	314 aa		31.2	■■■□□ 2.59
UBE3A-222	ENST00000630907	DHX36	Q9H2U1	1008 aa	Known RBP	31.2	■■■□□ 2.59
UBE3A-222	ENST00000630907	COL2A1	P02458	1487 aa	Predicted RBP	31.2	■■■□□ 2.58
UBE3A-222	ENST00000630907	ATRNL1	Q5VV63	1379 aa		31.19	■■■□□ 2.58
UBE3A-222	ENST00000630907	APLP1	P51693	650 aa		31.19	■■■□□ 2.58
UBE3A-222	ENST00000630907	CSRNP1	Q96S65	589 aa		31.19	■■■□□ 2.58
UBE3A-222	ENST00000630907	PALD1	Q9ULE6	856 aa		31.19	■■■□□ 2.58
UBE3A-222	ENST00000630907	CDK5RAP2	Q96SN8	1893 aa		31.18	■■■□□ 2.58
UBE3A-222	ENST00000630907	GSG1L2	A8MUP6	293 aa		31.18	■■■□□ 2.58
UBE3A-222	ENST00000630907	PATL2	C9JE40	543 aa	Known RBP	31.18	■■■□□ 2.58
UBE3A-222	ENST00000630907	MFAP1	P55081	439 aa	Known RBP	31.18	■■■□□ 2.58
UBE3A-222	ENST00000630907	RUFY2	Q8WXA3	655 aa		31.18	■■■□□ 2.58
UBE3A-222	ENST00000630907	GBA2	Q9HCG7	927 aa	Predicted RBP	31.18	■■■□□ 2.58
UBE3A-222	ENST00000630907	MCM9	Q9NXL9	1143 aa		31.18	■■■□□ 2.58
UBE3A-222	ENST00000630907	CCDC171	Q6TFL3	1326 aa		31.18	■■■□□ 2.58
UBE3A-222	ENST00000630907	FOCAD	Q5VW36	1801 aa		31.17	■■■□□ 2.58
UBE3A-222	ENST00000630907	TMEM88B	A6NKF7	163 aa		31.17	■■■□□ 2.58
UBE3A-222	ENST00000630907	APP	P05067	770 aa		31.17	■■■□□ 2.58
UBE3A-222	ENST00000630907	GIMAP6	Q6P9H5	292 aa		31.17	■■■□□ 2.58
UBE3A-222	ENST00000630907	ZNF589	Q86UQ0	364 aa	Predicted RBP	31.17	■■■□□ 2.58
UBE3A-222	ENST00000630907	C2orf69	Q8N8R5	385 aa		31.17	■■■□□ 2.58
UBE3A-222	ENST00000630907	SSC5D	A1L4H1	1573 aa		31.17	■■■□□ 2.58
UBE3A-222	ENST00000630907	PPP1R12B	O60237	982 aa	Predicted RBP	31.16	■■■□□ 2.58
UBE3A-222	ENST00000630907	PRKG1	Q13976	671 aa		31.16	■■■□□ 2.58
UBE3A-222	ENST00000630907	TTLL12	Q14166	644 aa	Predicted RBP	31.16	■■■□□ 2.58
UBE3A-222	ENST00000630907	TRPM7	Q96QT4	1865 aa		31.16	■■■□□ 2.58
UBE3A-222	ENST00000630907	POLR3D	P05423	398 aa	Predicted RBP	31.15	■■■□□ 2.58
UBE3A-222	ENST00000630907	HLA-DOA	P06340	250 aa		31.15	■■■□□ 2.58
UBE3A-222	ENST00000630907	FKBP1B	P68106	108 aa		31.15	■■■□□ 2.58
UBE3A-222	ENST00000630907	DCAF15	Q66K64	600 aa		31.15	■■■□□ 2.58
UBE3A-222	ENST00000630907	TTC6	Q86TZ1	520 aa		31.15	■■■□□ 2.58
UBE3A-222	ENST00000630907	NACAP1	Q9BZK3	213 aa		31.15	■■■□□ 2.58
UBE3A-222	ENST00000630907	PI4KB	Q9UBF8	816 aa		31.15	■■■□□ 2.58
UBE3A-222	ENST00000630907	RAD50	Q92878	1312 aa		31.15	■■■□□ 2.58
UBE3A-222	ENST00000630907	CDC45	O75419	566 aa		31.14	■■■□□ 2.58
UBE3A-222	ENST00000630907	MIGA2	Q7L4E1	593 aa		31.14	■■■□□ 2.58
UBE3A-222	ENST00000630907	ARMC9	Q7Z3E5	817 aa		31.14	■■■□□ 2.58
UBE3A-222	ENST00000630907	IFNL3	Q8IZI9	196 aa		31.14	■■■□□ 2.58
UBE3A-222	ENST00000630907	SLC4A8	Q2Y0W8	1093 aa		31.13	■■■□□ 2.57
UBE3A-222	ENST00000630907	VPS53	Q5VIR6	699 aa		31.13	■■■□□ 2.57
UBE3A-222	ENST00000630907	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	31.13	■■■□□ 2.57
UBE3A-222	ENST00000630907	ANGEL1	Q9UNK9	670 aa	Known RBP	31.13	■■■□□ 2.57
UBE3A-222	ENST00000630907	FZD1	Q9UP38	647 aa		31.13	■■■□□ 2.57
UBE3A-222	ENST00000630907	USP2	O75604	605 aa	Predicted RBP	31.12	■■■□□ 2.57
UBE3A-222	ENST00000630907	TDO2	P48775	406 aa		31.12	■■■□□ 2.57
UBE3A-222	ENST00000630907	CASC1	Q6TDU7	716 aa		31.12	■■■□□ 2.57
UBE3A-222	ENST00000630907	MOB2	Q70IA6	237 aa		31.12	■■■□□ 2.57
UBE3A-222	ENST00000630907	FOXP4	Q8IVH2	680 aa	Predicted RBP	31.12	■■■□□ 2.57
UBE3A-222	ENST00000630907	AMOTL1	Q8IY63	956 aa		31.12	■■■□□ 2.57
UBE3A-222	ENST00000630907	USP17L12	C9JPN9	530 aa		31.11	■■■□□ 2.57
UBE3A-222	ENST00000630907	USP17L21	D6R901	530 aa		31.11	■■■□□ 2.57
UBE3A-222	ENST00000630907	HSPD1	P10809	573 aa	Known RBP	31.11	■■■□□ 2.57
UBE3A-222	ENST00000630907	NAV1	Q8NEY1	1877 aa		31.11	■■■□□ 2.57
UBE3A-222	ENST00000630907	ZNF341	Q9BYN7	854 aa		31.11	■■■□□ 2.57
UBE3A-222	ENST00000630907	IL25	Q9H293	177 aa		31.11	■■■□□ 2.57
UBE3A-222	ENST00000630907	CREBZF	Q9NS37	354 aa		31.11	■■■□□ 2.57
UBE3A-222	ENST00000630907	SGSM2	O43147	1006 aa		31.1	■■■□□ 2.57
UBE3A-222	ENST00000630907	TBC1D12	O60347	775 aa		31.1	■■■□□ 2.57
UBE3A-222	ENST00000630907	CYP2D6	P10635	497 aa		31.1	■■■□□ 2.57
UBE3A-222	ENST00000630907	HSPA6	P17066	643 aa		31.1	■■■□□ 2.57
UBE3A-222	ENST00000630907	IREB2	P48200	963 aa	Known RBP	31.1	■■■□□ 2.57
UBE3A-222	ENST00000630907	MAP3K10	Q02779	954 aa		31.1	■■■□□ 2.57
UBE3A-222	ENST00000630907	MAP3K11	Q16584	847 aa		31.1	■■■□□ 2.57
UBE3A-222	ENST00000630907	CTR9	Q6PD62	1173 aa		31.1	■■■□□ 2.57
UBE3A-222	ENST00000630907	NAPB	Q9H115	298 aa		31.1	■■■□□ 2.57
UBE3A-222	ENST00000630907	ARPP21	Q9UBL0	812 aa	Predicted RBP	31.1	■■■□□ 2.57
UBE3A-222	ENST00000630907	ABT1	Q9ULW3	272 aa	Known RBP	31.1	■■■□□ 2.57
UBE3A-222	ENST00000630907	MYH1	P12882	1939 aa		31.1	■■■□□ 2.57
UBE3A-222	ENST00000630907	UBE2Q2L	H0YL09	131 aa		31.09	■■■□□ 2.57
UBE3A-222	ENST00000630907	FOXP2	O15409	715 aa		31.09	■■■□□ 2.57

Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms