RNA–Protein interactions for RNA: ENST00000627568.2

TCF4-259, Transcript of transcription factor 4, human

TSL 5

Gene TCF4, Length 806 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF4-259	ENST00000627568	FPGT-TNNI3K	V9GXZ4	949 aa		31.52	■■■□□ 2.64
TCF4-259	ENST00000627568	GPR75-ASB3	A0A0A6YYF3	556 aa		31.51	■■■□□ 2.63
TCF4-259	ENST00000627568	BTBD19	C9JJ37	291 aa		31.51	■■■□□ 2.63
TCF4-259	ENST00000627568	ZBTB7B	O15156	539 aa	Predicted RBP	31.51	■■■□□ 2.63
TCF4-259	ENST00000627568	ARHGEF6	Q15052	776 aa		31.51	■■■□□ 2.63
TCF4-259	ENST00000627568	CCDC158	Q5M9N0	1113 aa		31.51	■■■□□ 2.63
TCF4-259	ENST00000627568	TBC1D9	Q6ZT07	1266 aa		31.51	■■■□□ 2.63
TCF4-259	ENST00000627568	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	31.51	■■■□□ 2.63
TCF4-259	ENST00000627568	PDE4DIP	Q5VU43	2346 aa		31.5	■■■□□ 2.63
TCF4-259	ENST00000627568	NSUN4	Q96CB9	384 aa	Known RBP	31.5	■■■□□ 2.63
TCF4-259	ENST00000627568	LRP2BP	Q9P2M1	347 aa		31.5	■■■□□ 2.63
TCF4-259	ENST00000627568	ATRNL1	Q5VV63	1379 aa		31.5	■■■□□ 2.63
TCF4-259	ENST00000627568	DDX4	Q9NQI0	724 aa	Known RBP	31.49	■■■□□ 2.63
TCF4-259	ENST00000627568	MAP4K4	O95819	1239 aa	Predicted RBP	31.48	■■■□□ 2.63
TCF4-259	ENST00000627568	ZNF384	Q8TF68	577 aa		31.48	■■■□□ 2.63
TCF4-259	ENST00000627568	DBNDD2	Q9BQY9	259 aa		31.48	■■■□□ 2.63
TCF4-259	ENST00000627568	PICK1	Q9NRD5	415 aa		31.48	■■■□□ 2.63
TCF4-259	ENST00000627568	KCNH4	Q9UQ05	1017 aa		31.48	■■■□□ 2.63
TCF4-259	ENST00000627568	PTPN22	Q9Y2R2	807 aa		31.48	■■■□□ 2.63
TCF4-259	ENST00000627568	TLR2	O60603	784 aa		31.47	■■■□□ 2.63
TCF4-259	ENST00000627568	RHBDL3	P58872	404 aa		31.47	■■■□□ 2.63
TCF4-259	ENST00000627568	SH3BP5L	Q7L8J4	393 aa		31.47	■■■□□ 2.63
TCF4-259	ENST00000627568	NOL10	Q9BSC4	688 aa	Known RBP	31.47	■■■□□ 2.63
TCF4-259	ENST00000627568	NOP58	Q9Y2X3	529 aa	Known RBP	31.47	■■■□□ 2.63
TCF4-259	ENST00000627568	MAST2	Q6P0Q8	1798 aa		31.46	■■■□□ 2.63
TCF4-259	ENST00000627568	DDTL	A6NHG4	134 aa	Predicted RBP	31.46	■■■□□ 2.63
TCF4-259	ENST00000627568	SCYL3	Q8IZE3	742 aa		31.46	■■■□□ 2.63
TCF4-259	ENST00000627568	MS4A1	P11836	297 aa		31.45	■■■□□ 2.63
TCF4-259	ENST00000627568	ANKRD23	Q86SG2	305 aa		31.45	■■■□□ 2.63
TCF4-259	ENST00000627568	SNRK	Q9NRH2	765 aa		31.45	■■■□□ 2.63
TCF4-259	ENST00000627568	PHF20L1	A8MW92	1017 aa		31.44	■■■□□ 2.62
TCF4-259	ENST00000627568	NPM3	O75607	178 aa	Known RBP	31.44	■■■□□ 2.62
TCF4-259	ENST00000627568	KIF22	Q14807	665 aa		31.44	■■■□□ 2.62
TCF4-259	ENST00000627568	PANK1	Q8TE04	598 aa		31.44	■■■□□ 2.62
TCF4-259	ENST00000627568	DOCK1	Q14185	1865 aa		31.44	■■■□□ 2.62
TCF4-259	ENST00000627568	CEP85	Q6P2H3	762 aa		31.43	■■■□□ 2.62
TCF4-259	ENST00000627568	CXCL11	O14625	94 aa		31.42	■■■□□ 2.62
TCF4-259	ENST00000627568	MAP3K10	Q02779	954 aa		31.42	■■■□□ 2.62
TCF4-259	ENST00000627568	ZNF512B	Q96KM6	892 aa	Predicted RBP	31.42	■■■□□ 2.62
TCF4-259	ENST00000627568	COL2A1	P02458	1487 aa	Predicted RBP	31.41	■■■□□ 2.62
TCF4-259	ENST00000627568	PDHX	O00330	501 aa		31.41	■■■□□ 2.62
TCF4-259	ENST00000627568	NAA16	Q6N069	864 aa	Predicted RBP	31.41	■■■□□ 2.62
TCF4-259	ENST00000627568	TEX11	Q8IYF3	940 aa		31.41	■■■□□ 2.62
TCF4-259	ENST00000627568	ZHX2	Q9Y6X8	837 aa		31.41	■■■□□ 2.62
TCF4-259	ENST00000627568	CTNND1	O60716	968 aa	Known RBP	31.4	■■■□□ 2.62
TCF4-259	ENST00000627568	BAG3	O95817	575 aa		31.4	■■■□□ 2.62
TCF4-259	ENST00000627568	PTPRA	P18433	802 aa		31.4	■■■□□ 2.62
TCF4-259	ENST00000627568	CAP1	Q01518	475 aa		31.4	■■■□□ 2.62
TCF4-259	ENST00000627568	ERC1	Q8IUD2	1116 aa		31.4	■■■□□ 2.62
TCF4-259	ENST00000627568	DBNL	Q9UJU6	430 aa	Known RBP	31.4	■■■□□ 2.62
TCF4-259	ENST00000627568	HTT	P42858	3142 aa		31.4	■■■□□ 2.62
TCF4-259	ENST00000627568	LACTB	P83111	547 aa	Predicted RBP	31.39	■■■□□ 2.62
TCF4-259	ENST00000627568	OSBPL5	Q9H0X9	879 aa	Predicted RBP	31.39	■■■□□ 2.62
TCF4-259	ENST00000627568	KIAA0100	Q14667	2235 aa	Known RBP	31.39	■■■□□ 2.61
TCF4-259	ENST00000627568	TBC1D12	O60347	775 aa		31.38	■■■□□ 2.61
TCF4-259	ENST00000627568	PLCG2	P16885	1265 aa		31.38	■■■□□ 2.61
TCF4-259	ENST00000627568	PARK7	Q99497	189 aa	Known RBP	31.38	■■■□□ 2.61
TCF4-259	ENST00000627568	CCDC8	Q9H0W5	538 aa	Predicted RBP	31.38	■■■□□ 2.61
TCF4-259	ENST00000627568	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	31.38	■■■□□ 2.61
TCF4-259	ENST00000627568	IGSF3	O75054	1194 aa		31.37	■■■□□ 2.61
TCF4-259	ENST00000627568	CYP2E1	P05181	493 aa	Predicted RBP	31.37	■■■□□ 2.61
TCF4-259	ENST00000627568	FASTKD5	Q7L8L6	764 aa	Known RBP	31.37	■■■□□ 2.61
TCF4-259	ENST00000627568	TLR7	Q9NYK1	1049 aa	Known RBP	31.37	■■■□□ 2.61
TCF4-259	ENST00000627568	MYO5A	Q9Y4I1	1855 aa	Known RBP	31.36	■■■□□ 2.61
TCF4-259	ENST00000627568	ZAP70	P43403	619 aa		31.36	■■■□□ 2.61
TCF4-259	ENST00000627568	MOGS	Q13724	837 aa		31.36	■■■□□ 2.61
TCF4-259	ENST00000627568	HSP90AB4P	Q58FF6	505 aa		31.36	■■■□□ 2.61
TCF4-259	ENST00000627568	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	31.36	■■■□□ 2.61
TCF4-259	ENST00000627568	ARMC5	Q96C12	935 aa		31.36	■■■□□ 2.61
TCF4-259	ENST00000627568	EAF2	Q96CJ1	260 aa	Predicted RBP	31.36	■■■□□ 2.61
TCF4-259	ENST00000627568	AATF	Q9NY61	560 aa	Known RBP eCLIP	31.36	■■■□□ 2.61
TCF4-259	ENST00000627568	CPA4	Q9UI42	421 aa		31.36	■■■□□ 2.61
TCF4-259	ENST00000627568	EXOC6B	Q9Y2D4	811 aa		31.36	■■■□□ 2.61
TCF4-259	ENST00000627568	PTPRF	P10586	1907 aa		31.36	■■■□□ 2.61
TCF4-259	ENST00000627568		A0A0G2JLL6	359 aa	Predicted RBP	31.35	■■■□□ 2.61
TCF4-259	ENST00000627568	GNRH1	P01148	92 aa		31.35	■■■□□ 2.61
TCF4-259	ENST00000627568	SLURP2	P0DP57	97 aa		31.35	■■■□□ 2.61
TCF4-259	ENST00000627568	C17orf99	Q6UX52	265 aa		31.35	■■■□□ 2.61
TCF4-259	ENST00000627568	PRRT2	Q7Z6L0	340 aa	Predicted RBP	31.35	■■■□□ 2.61
TCF4-259	ENST00000627568	AFG3L2	Q9Y4W6	797 aa		31.35	■■■□□ 2.61
TCF4-259	ENST00000627568	PTCH2	Q9Y6C5	1203 aa		31.35	■■■□□ 2.61
TCF4-259	ENST00000627568	ZSWIM8	A7E2V4	1837 aa		31.35	■■■□□ 2.61
TCF4-259	ENST00000627568	PHIP	Q8WWQ0	1821 aa		31.34	■■■□□ 2.61
TCF4-259	ENST00000627568	SLC9C1	Q4G0N8	1177 aa		31.34	■■■□□ 2.61
TCF4-259	ENST00000627568	ARHGAP39	Q9C0H5	1083 aa		31.34	■■■□□ 2.61
TCF4-259	ENST00000627568	DDX19B	Q9UMR2	479 aa		31.34	■■■□□ 2.61
TCF4-259	ENST00000627568	TNRC18	O15417	2968 aa	Predicted RBP	31.33	■■■□□ 2.61
TCF4-259	ENST00000627568	FAM196B	A6NMK8	535 aa		31.33	■■■□□ 2.61
TCF4-259	ENST00000627568	GADL1	Q6ZQY3	521 aa		31.33	■■■□□ 2.61
TCF4-259	ENST00000627568	NBPF11	Q86T75	865 aa		31.33	■■■□□ 2.61
TCF4-259	ENST00000627568	RBBP6	Q7Z6E9	1792 aa	Known RBP	31.33	■■■□□ 2.61
TCF4-259	ENST00000627568	ADGRA2	Q96PE1	1338 aa		31.32	■■■□□ 2.6
TCF4-259	ENST00000627568	TRIM75P	A6NK02	468 aa		31.32	■■■□□ 2.6
TCF4-259	ENST00000627568	GPAT2	Q6NUI2	795 aa		31.32	■■■□□ 2.6
TCF4-259	ENST00000627568	AACS	Q86V21	672 aa		31.32	■■■□□ 2.6
TCF4-259	ENST00000627568	DHX36	Q9H2U1	1008 aa	Known RBP	31.32	■■■□□ 2.6
TCF4-259	ENST00000627568	CDK5RAP2	Q96SN8	1893 aa		31.31	■■■□□ 2.6
TCF4-259	ENST00000627568	ATAD5	Q96QE3	1844 aa		31.31	■■■□□ 2.6
TCF4-259	ENST00000627568	PPP4C	P60510	307 aa		31.31	■■■□□ 2.6
TCF4-259	ENST00000627568	PIH1D3	Q9NQM4	214 aa	Known RBP	31.31	■■■□□ 2.6

Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms