RNA–Protein interactions for RNA: ENST00000627441.2

SPTAN1-212, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-212ENST00000627441 PLBD2Q8NHP8 589 aa10.67□□□□□ -0.7
SPTAN1-212ENST00000627441 PKD1L2Q7Z442 2459 aa10.67□□□□□ -0.7
SPTAN1-212ENST00000627441 BRWD1Q9NSI6 2320 aa10.67□□□□□ -0.7
SPTAN1-212ENST00000627441 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.66□□□□□ -0.7
SPTAN1-212ENST00000627441 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.66□□□□□ -0.7
SPTAN1-212ENST00000627441 TLL1O43897 1013 aa10.66□□□□□ -0.7
SPTAN1-212ENST00000627441 PDE8AO60658 829 aa10.66□□□□□ -0.7
SPTAN1-212ENST00000627441 CNGB1Q14028 1251 aaPredicted RBP10.66□□□□□ -0.7
SPTAN1-212ENST00000627441 GRIK5Q16478 980 aa10.66□□□□□ -0.7
SPTAN1-212ENST00000627441 KRT24Q2M2I5 525 aa10.66□□□□□ -0.7
SPTAN1-212ENST00000627441 TRIM60Q495X7 471 aa10.66□□□□□ -0.7
SPTAN1-212ENST00000627441 GREM2Q9H772 168 aa10.66□□□□□ -0.7
SPTAN1-212ENST00000627441 CHPF2Q9P2E5 772 aa10.66□□□□□ -0.7
SPTAN1-212ENST00000627441 LEMD3Q9Y2U8 911 aa10.66□□□□□ -0.7
SPTAN1-212ENST00000627441 DMDP11532 3685 aa10.65□□□□□ -0.7
SPTAN1-212ENST00000627441 PEX10O60683 326 aa10.65□□□□□ -0.7
SPTAN1-212ENST00000627441 CCL14Q16627 93 aa10.65□□□□□ -0.7
SPTAN1-212ENST00000627441 GADL1Q6ZQY3 521 aa10.65□□□□□ -0.7
SPTAN1-212ENST00000627441 SMCR8Q8TEV9 937 aaPredicted RBP10.65□□□□□ -0.7
SPTAN1-212ENST00000627441 DOCK1Q14185 1865 aa10.65□□□□□ -0.7
SPTAN1-212ENST00000627441 TRIOO75962 3097 aa10.65□□□□□ -0.7
SPTAN1-212ENST00000627441 LOC285556D6RIA3 1793 aa10.65□□□□□ -0.71
SPTAN1-212ENST00000627441 ZFHX2Q9C0A1 2572 aaPredicted RBP10.64□□□□□ -0.71
SPTAN1-212ENST00000627441 DOCK2Q92608 1830 aa10.64□□□□□ -0.71
SPTAN1-212ENST00000627441 A0A0G2JLL6 359 aaPredicted RBP10.64□□□□□ -0.71
SPTAN1-212ENST00000627441 TNNI2P48788 182 aa10.64□□□□□ -0.71
SPTAN1-212ENST00000627441 FAM110CQ1W6H9 321 aa10.64□□□□□ -0.71
SPTAN1-212ENST00000627441 PRRT2Q7Z6L0 340 aaPredicted RBP10.64□□□□□ -0.71
SPTAN1-212ENST00000627441 CDC5LQ99459 802 aaKnown RBP10.64□□□□□ -0.71
SPTAN1-212ENST00000627441 ZNF341Q9BYN7 854 aa10.64□□□□□ -0.71
SPTAN1-212ENST00000627441 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.64□□□□□ -0.71
SPTAN1-212ENST00000627441 TTF2Q9UNY4 1162 aaKnown RBP10.64□□□□□ -0.71
SPTAN1-212ENST00000627441 ERC2O15083 957 aa10.63□□□□□ -0.71
SPTAN1-212ENST00000627441 IL1R1P14778 569 aa10.63□□□□□ -0.71
SPTAN1-212ENST00000627441 CRKP46108 304 aa10.63□□□□□ -0.71
SPTAN1-212ENST00000627441 FKBP1AP62942 108 aaKnown RBP10.63□□□□□ -0.71
SPTAN1-212ENST00000627441 TRIM28Q13263 835 aaKnown RBP10.63□□□□□ -0.71
SPTAN1-212ENST00000627441 TSPYL4Q9UJ04 414 aa10.63□□□□□ -0.71
SPTAN1-212ENST00000627441 SERPINA10Q9UK55 444 aa10.63□□□□□ -0.71
SPTAN1-212ENST00000627441 RGS20O76081 388 aa10.62□□□□□ -0.71
SPTAN1-212ENST00000627441 PCCAP05165 728 aaPredicted RBP10.62□□□□□ -0.71
SPTAN1-212ENST00000627441 CTSWP56202 376 aa10.62□□□□□ -0.71
SPTAN1-212ENST00000627441 SKIV2LQ15477 1246 aaKnown RBP10.62□□□□□ -0.71
SPTAN1-212ENST00000627441 AAK1Q2M2I8 961 aa10.62□□□□□ -0.71
SPTAN1-212ENST00000627441 NOL9Q5SY16 702 aaKnown RBP10.62□□□□□ -0.71
SPTAN1-212ENST00000627441 TREML2Q5T2D2 321 aa10.62□□□□□ -0.71
SPTAN1-212ENST00000627441 SLC39A5Q6ZMH5 540 aa10.62□□□□□ -0.71
SPTAN1-212ENST00000627441 CCDC84Q86UT8 332 aaPredicted RBP10.62□□□□□ -0.71
SPTAN1-212ENST00000627441 ZNF112Q9UJU3 913 aa10.62□□□□□ -0.71
SPTAN1-212ENST00000627441 RPAP1Q9BWH6 1393 aaPredicted RBP10.62□□□□□ -0.71
SPTAN1-212ENST00000627441 PLXNA3P51805 1871 aa10.61□□□□□ -0.71
SPTAN1-212ENST00000627441 TAF5LO75529 589 aa10.61□□□□□ -0.71
SPTAN1-212ENST00000627441 SLURP2P0DP57 97 aa10.61□□□□□ -0.71
SPTAN1-212ENST00000627441 NCBP3Q53F19 620 aaKnown RBP10.61□□□□□ -0.71
SPTAN1-212ENST00000627441 GJC2Q5T442 439 aaPredicted RBP10.61□□□□□ -0.71
SPTAN1-212ENST00000627441 CCDC129Q6ZRS4 1044 aa10.61□□□□□ -0.71
SPTAN1-212ENST00000627441 PRSS33Q8NF86 280 aa10.61□□□□□ -0.71
SPTAN1-212ENST00000627441 TTLL11Q8NHH1 800 aa10.61□□□□□ -0.71
SPTAN1-212ENST00000627441 TSPYL2Q9H2G4 693 aaPredicted RBP10.61□□□□□ -0.71
SPTAN1-212ENST00000627441 NKX2-4Q9H2Z4 354 aa10.61□□□□□ -0.71
SPTAN1-212ENST00000627441 CFAP47Q6ZTR5 3102 aa10.6□□□□□ -0.71
SPTAN1-212ENST00000627441 CXCL11O14625 94 aa10.6□□□□□ -0.71
SPTAN1-212ENST00000627441 ZKSCAN1P17029 563 aaPredicted RBP10.6□□□□□ -0.71
SPTAN1-212ENST00000627441 CHRNDQ07001 517 aa10.6□□□□□ -0.71
SPTAN1-212ENST00000627441 SNX17Q15036 470 aa10.6□□□□□ -0.71
SPTAN1-212ENST00000627441 MFSD14BQ5SR56 506 aa10.6□□□□□ -0.71
SPTAN1-212ENST00000627441 DCAF15Q66K64 600 aa10.6□□□□□ -0.71
SPTAN1-212ENST00000627441 KRT40Q6A162 431 aa10.6□□□□□ -0.71
SPTAN1-212ENST00000627441 MYD88Q99836 296 aa10.6□□□□□ -0.71
SPTAN1-212ENST00000627441 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.6□□□□□ -0.711e-6■■□□□ 12.3
SPTAN1-212ENST00000627441 YBX2Q9Y2T7 364 aaKnown RBP10.6□□□□□ -0.71
SPTAN1-212ENST00000627441 DNAH14Q0VDD8 3507 aa10.59□□□□□ -0.71
SPTAN1-212ENST00000627441 RFXAPO00287 272 aa10.59□□□□□ -0.71
SPTAN1-212ENST00000627441 KCNJ4P48050 445 aa10.59□□□□□ -0.71
SPTAN1-212ENST00000627441 FASTKD5Q7L8L6 764 aaKnown RBP10.59□□□□□ -0.71
SPTAN1-212ENST00000627441 SLC45A1Q9Y2W3 748 aa10.59□□□□□ -0.71
SPTAN1-212ENST00000627441 AFG3L2Q9Y4W6 797 aa10.59□□□□□ -0.71
SPTAN1-212ENST00000627441 ZHX2Q9Y6X8 837 aa10.59□□□□□ -0.71
SPTAN1-212ENST00000627441 ATAD5Q96QE3 1844 aa10.58□□□□□ -0.72
SPTAN1-212ENST00000627441 DNM1LO00429 736 aa10.58□□□□□ -0.72
SPTAN1-212ENST00000627441 GFRA3O60609 400 aa10.58□□□□□ -0.72
SPTAN1-212ENST00000627441 PTPRAP18433 802 aa10.58□□□□□ -0.72
SPTAN1-212ENST00000627441 FPGSQ05932 587 aa10.58□□□□□ -0.72
SPTAN1-212ENST00000627441 C16orf59Q7L2K0 433 aa10.58□□□□□ -0.72
SPTAN1-212ENST00000627441 KCNH6Q9H252 994 aa10.58□□□□□ -0.72
SPTAN1-212ENST00000627441 FLRT1Q9NZU1 646 aa10.58□□□□□ -0.72
SPTAN1-212ENST00000627441 COL4A4P53420 1690 aaPredicted RBP10.57□□□□□ -0.72
SPTAN1-212ENST00000627441 PTPRZ1P23471 2315 aaPredicted RBP10.57□□□□□ -0.72
SPTAN1-212ENST00000627441 TRIM75PA6NK02 468 aa10.57□□□□□ -0.72
SPTAN1-212ENST00000627441 PER1O15534 1290 aaPredicted RBP10.57□□□□□ -0.72
SPTAN1-212ENST00000627441 TLE2Q04725 743 aa10.57□□□□□ -0.72
SPTAN1-212ENST00000627441 HFE2Q6ZVN8 426 aa10.57□□□□□ -0.72
SPTAN1-212ENST00000627441 FAM83AQ86UY5 434 aa10.57□□□□□ -0.72
SPTAN1-212ENST00000627441 TRPV1Q8NER1 839 aa10.57□□□□□ -0.72
SPTAN1-212ENST00000627441 LPAR1Q92633 364 aa10.57□□□□□ -0.72
SPTAN1-212ENST00000627441 USP6NLQ92738 828 aa10.57□□□□□ -0.72
SPTAN1-212ENST00000627441 COL26A1Q96A83 441 aa10.57□□□□□ -0.72
SPTAN1-212ENST00000627441 FERMT2Q96AC1 680 aa10.57□□□□□ -0.72
SPTAN1-212ENST00000627441 NUDT12Q9BQG2 462 aa10.57□□□□□ -0.72
SPTAN1-212ENST00000627441 FAM86C1Q9NVL1 165 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms