RNA–Protein interactions for RNA: ENST00000626828.1

UBE3D-208, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5 BASIC

Gene UBE3D, Length 114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-208ENST00000626828 GPATCH3Q96I76 525 aa20.34■□□□□ 0.85
UBE3D-208ENST00000626828 HAUS7Q99871 368 aa20.34■□□□□ 0.85
UBE3D-208ENST00000626828 RWDD1Q9H446 243 aaPredicted RBP20.34■□□□□ 0.85
UBE3D-208ENST00000626828 DDX4Q9NQI0 724 aaKnown RBP20.34■□□□□ 0.85
UBE3D-208ENST00000626828 AATFQ9NY61 560 aaKnown RBP eCLIP20.34■□□□□ 0.85
UBE3D-208ENST00000626828 CSADQ9Y600 493 aa20.34■□□□□ 0.85
UBE3D-208ENST00000626828 ZBTB48P10074 688 aaPredicted RBP20.33■□□□□ 0.85
UBE3D-208ENST00000626828 TM4SF4P48230 202 aa20.33■□□□□ 0.85
UBE3D-208ENST00000626828 INHBEP58166 350 aa20.33■□□□□ 0.85
UBE3D-208ENST00000626828 SH3RF3Q8TEJ3 882 aaPredicted RBP20.33■□□□□ 0.85
UBE3D-208ENST00000626828 PAG1Q9NWQ8 432 aa20.33■□□□□ 0.85
UBE3D-208ENST00000626828 SLC9C2Q5TAH2 1124 aa20.32■□□□□ 0.84
UBE3D-208ENST00000626828 ADGRA1Q86SQ6 560 aa20.32■□□□□ 0.84
UBE3D-208ENST00000626828 WNK4Q96J92 1243 aa20.32■□□□□ 0.84
UBE3D-208ENST00000626828 ZNF112Q9UJU3 913 aa20.32■□□□□ 0.84
UBE3D-208ENST00000626828 THSD7BQ9C0I4 1608 aa20.31■□□□□ 0.84
UBE3D-208ENST00000626828 DDTLA6NHG4 134 aaPredicted RBP20.31■□□□□ 0.84
UBE3D-208ENST00000626828 MAP3K10Q02779 954 aa20.31■□□□□ 0.84
UBE3D-208ENST00000626828 MKRN3Q13064 507 aaKnown RBP20.31■□□□□ 0.84
UBE3D-208ENST00000626828 ANKRD45Q5TZF3 282 aa20.31■□□□□ 0.84
UBE3D-208ENST00000626828 SH3BP5LQ7L8J4 393 aa20.31■□□□□ 0.84
UBE3D-208ENST00000626828 WRNIP1Q96S55 665 aa20.31■□□□□ 0.84
UBE3D-208ENST00000626828 ELP3Q9H9T3 547 aa20.31■□□□□ 0.84
UBE3D-208ENST00000626828 PRDM10Q9NQV6 1147 aa20.31■□□□□ 0.84
UBE3D-208ENST00000626828 MANSC4A6NHS7 340 aaPredicted RBP20.3■□□□□ 0.84
UBE3D-208ENST00000626828 LBX1P52954 281 aa20.3■□□□□ 0.84
UBE3D-208ENST00000626828 SREBF2Q12772 1141 aa20.3■□□□□ 0.84
UBE3D-208ENST00000626828 VGLL4Q14135 290 aa20.3■□□□□ 0.84
UBE3D-208ENST00000626828 TGFBRAP1Q8WUH2 860 aa20.3■□□□□ 0.84
UBE3D-208ENST00000626828 OSBPL5Q9H0X9 879 aaPredicted RBP20.3■□□□□ 0.84
UBE3D-208ENST00000626828 RNF186Q9NXI6 227 aa20.3■□□□□ 0.84
UBE3D-208ENST00000626828 RFX7Q2KHR2 1363 aa20.3■□□□□ 0.84
UBE3D-208ENST00000626828 TBC1D12O60347 775 aa20.29■□□□□ 0.84
UBE3D-208ENST00000626828 HSPA8P11142 646 aaKnown RBP20.29■□□□□ 0.84
UBE3D-208ENST00000626828 PDE6AP16499 860 aa20.29■□□□□ 0.84
UBE3D-208ENST00000626828 DYNLL1P63167 89 aaKnown RBP20.29■□□□□ 0.84
UBE3D-208ENST00000626828 ZKSCAN4Q969J2 545 aaPredicted RBP20.29■□□□□ 0.84
UBE3D-208ENST00000626828 OPTNQ96CV9 577 aa20.29■□□□□ 0.84
UBE3D-208ENST00000626828 EDC3Q96F86 508 aaKnown RBP20.29■□□□□ 0.84
UBE3D-208ENST00000626828 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.29■□□□□ 0.84
UBE3D-208ENST00000626828 DHX36Q9H2U1 1008 aaKnown RBP20.29■□□□□ 0.84
UBE3D-208ENST00000626828 SAGE1Q9NXZ1 904 aa20.29■□□□□ 0.84
UBE3D-208ENST00000626828 TRPA1O75762 1119 aa20.28■□□□□ 0.84
UBE3D-208ENST00000626828 ERO1BQ86YB8 467 aa20.28■□□□□ 0.84
UBE3D-208ENST00000626828 MIGA1Q8NAN2 632 aa20.28■□□□□ 0.84
UBE3D-208ENST00000626828 TTC41PQ6P2S7 1318 aa20.27■□□□□ 0.84
UBE3D-208ENST00000626828 ATRNL1Q5VV63 1379 aa20.27■□□□□ 0.84
UBE3D-208ENST00000626828 ERC2O15083 957 aa20.27■□□□□ 0.84
UBE3D-208ENST00000626828 INPP5BP32019 993 aa20.27■□□□□ 0.84
UBE3D-208ENST00000626828 ZSCAN25Q6NSZ9 544 aa20.27■□□□□ 0.84
UBE3D-208ENST00000626828 MAPKAPK5Q8IW41 473 aa20.27■□□□□ 0.84
UBE3D-208ENST00000626828 PI4KBQ9UBF8 816 aa20.27■□□□□ 0.84
UBE3D-208ENST00000626828 ZNF532Q9HCE3 1301 aa20.27■□□□□ 0.83
UBE3D-208ENST00000626828 MAGEB6P1A0A0J9YX57 407 aa20.26■□□□□ 0.83
UBE3D-208ENST00000626828 SPDYE5A6NIY4 337 aa20.26■□□□□ 0.83
UBE3D-208ENST00000626828 PHF20L1A8MW92 1017 aa20.26■□□□□ 0.83
UBE3D-208ENST00000626828 GJA5P36382 358 aa20.26■□□□□ 0.83
UBE3D-208ENST00000626828 FOXP4Q8IVH2 680 aaPredicted RBP20.26■□□□□ 0.83
UBE3D-208ENST00000626828 SNCAIPQ9Y6H5 919 aa20.26■□□□□ 0.83
UBE3D-208ENST00000626828 DOCK2Q92608 1830 aa20.25■□□□□ 0.83
UBE3D-208ENST00000626828 TCRBV5S4A2TA0A5A2 114 aa20.25■□□□□ 0.83
UBE3D-208ENST00000626828 ALDH1A1P00352 501 aa20.25■□□□□ 0.83
UBE3D-208ENST00000626828 ADD2P35612 726 aa20.25■□□□□ 0.83
UBE3D-208ENST00000626828 USP5P45974 858 aa20.25■□□□□ 0.83
UBE3D-208ENST00000626828 PPATQ06203 517 aa20.25■□□□□ 0.83
UBE3D-208ENST00000626828 NOL9Q5SY16 702 aaKnown RBP20.25■□□□□ 0.83
UBE3D-208ENST00000626828 COL13A1Q5TAT6 717 aaPredicted RBP20.25■□□□□ 0.83
UBE3D-208ENST00000626828 OTUD7BQ6GQQ9 843 aa20.25■□□□□ 0.83
UBE3D-208ENST00000626828 SMC5Q8IY18 1101 aa20.25■□□□□ 0.83
UBE3D-208ENST00000626828 RIOK1Q9BRS2 568 aaKnown RBP20.25■□□□□ 0.83
UBE3D-208ENST00000626828 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.25■□□□□ 0.83
UBE3D-208ENST00000626828 TSKSQ9UJT2 592 aa20.25■□□□□ 0.83
UBE3D-208ENST00000626828 MAST2Q6P0Q8 1798 aa20.25■□□□□ 0.83
UBE3D-208ENST00000626828 COL2A1P02458 1487 aaPredicted RBP20.24■□□□□ 0.83
UBE3D-208ENST00000626828 TESPA1A2RU30 521 aaPredicted RBP20.24■□□□□ 0.83
UBE3D-208ENST00000626828 CTNND1O60716 968 aaKnown RBP20.24■□□□□ 0.83
UBE3D-208ENST00000626828 GLRX3O76003 335 aaKnown RBP20.24■□□□□ 0.83
UBE3D-208ENST00000626828 IGHDP01880 384 aa20.24■□□□□ 0.83
UBE3D-208ENST00000626828 GTF2A2P52657 109 aa20.24■□□□□ 0.83
UBE3D-208ENST00000626828 UBE3CQ15386 1083 aa20.24■□□□□ 0.83
UBE3D-208ENST00000626828 CNKSR2Q8WXI2 1034 aa20.24■□□□□ 0.83
UBE3D-208ENST00000626828 OTUD5Q96G74 571 aa20.24■□□□□ 0.83
UBE3D-208ENST00000626828 HERC5Q9UII4 1024 aaKnown RBP20.24■□□□□ 0.83
UBE3D-208ENST00000626828 FLT1P17948 1338 aa20.24■□□□□ 0.83
UBE3D-208ENST00000626828 MX1P20591 662 aa20.23■□□□□ 0.83
UBE3D-208ENST00000626828 IFNL1Q8IU54 200 aa20.23■□□□□ 0.83
UBE3D-208ENST00000626828 MS4A4AQ96JQ5 239 aa20.23■□□□□ 0.83
UBE3D-208ENST00000626828 CRNKL1Q9BZJ0 848 aaKnown RBP20.23■□□□□ 0.83
UBE3D-208ENST00000626828 PALD1Q9ULE6 856 aa20.23■□□□□ 0.83
UBE3D-208ENST00000626828 IRX6P78412 446 aaPredicted RBP20.22■□□□□ 0.83
UBE3D-208ENST00000626828 PPIL2Q13356 520 aa20.22■□□□□ 0.83
UBE3D-208ENST00000626828 LRRFIP1Q32MZ4 808 aaKnown RBP20.22■□□□□ 0.83
UBE3D-208ENST00000626828 TSHZ3Q63HK5 1081 aa20.22■□□□□ 0.83
UBE3D-208ENST00000626828 KBTBD3Q8NAB2 608 aa20.22■□□□□ 0.83
UBE3D-208ENST00000626828 OTUD7AQ8TE49 926 aaPredicted RBP20.22■□□□□ 0.83
UBE3D-208ENST00000626828 PICK1Q9NRD5 415 aa20.22■□□□□ 0.83
UBE3D-208ENST00000626828 OTOFQ9HC10 1997 aa20.22■□□□□ 0.83
UBE3D-208ENST00000626828 IRF6O14896 467 aa20.21■□□□□ 0.83
UBE3D-208ENST00000626828 HLA-DOAP06340 250 aa20.21■□□□□ 0.83
UBE3D-208ENST00000626828 SNAPC2Q13487 334 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 108.6 ms