RNA–Protein interactions for RNA: ENST00000625286.1

DDX41-218, Transcript of DEAD-box helicase 41, humanhuman

TSL 5 BASIC

Gene DDX41, Length 150 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-218ENST00000625286 RASGRF1Q13972 1273 aa13.78□□□□□ -0.2
DDX41-218ENST00000625286 SMC4Q9NTJ3 1288 aa13.78□□□□□ -0.2
DDX41-218ENST00000625286 FBXO3Q9UK99 471 aa13.78□□□□□ -0.2
DDX41-218ENST00000625286 AFG3L2Q9Y4W6 797 aa13.78□□□□□ -0.2
DDX41-218ENST00000625286 ZHX2Q9Y6X8 837 aa13.78□□□□□ -0.2
DDX41-218ENST00000625286 GAKO14976 1311 aa13.78□□□□□ -0.2
DDX41-218ENST00000625286 PTPRFP10586 1907 aa13.78□□□□□ -0.2
DDX41-218ENST00000625286 A0A0G2JLL6 359 aaPredicted RBP13.77□□□□□ -0.21
DDX41-218ENST00000625286 GRK4P32298 578 aa13.77□□□□□ -0.21
DDX41-218ENST00000625286 ZEB1P37275 1124 aaPredicted RBP13.77□□□□□ -0.21
DDX41-218ENST00000625286 IL15P40933 162 aaPredicted RBP13.77□□□□□ -0.21
DDX41-218ENST00000625286 PRRT2Q7Z6L0 340 aaPredicted RBP13.77□□□□□ -0.21
DDX41-218ENST00000625286 CCDC84Q86UT8 332 aaPredicted RBP13.77□□□□□ -0.21
DDX41-218ENST00000625286 MEIS3Q99687 375 aa13.77□□□□□ -0.21
DDX41-218ENST00000625286 COPRSQ9NQ92 184 aa13.77□□□□□ -0.21
DDX41-218ENST00000625286 DENND2AQ9ULE3 1009 aa13.77□□□□□ -0.21
DDX41-218ENST00000625286 DOCK2Q92608 1830 aa13.76□□□□□ -0.21
DDX41-218ENST00000625286 MYPNQ86TC9 1320 aa13.76□□□□□ -0.21
DDX41-218ENST00000625286 SEMA3EO15041 775 aa13.76□□□□□ -0.21
DDX41-218ENST00000625286 ENTPD3O75355 529 aa13.76□□□□□ -0.21
DDX41-218ENST00000625286 CCL5P13501 91 aa13.76□□□□□ -0.21
DDX41-218ENST00000625286 GJA8P48165 433 aa13.76□□□□□ -0.21
DDX41-218ENST00000625286 SCYL3Q8IZE3 742 aa13.76□□□□□ -0.21
DDX41-218ENST00000625286 RAET1EQ8TD07 263 aa13.76□□□□□ -0.21
DDX41-218ENST00000625286 FAM163AQ96GL9 167 aaPredicted RBP13.76□□□□□ -0.21
DDX41-218ENST00000625286 GNL3LQ9NVN8 582 aaKnown RBP13.76□□□□□ -0.21
DDX41-218ENST00000625286 LAMA3Q16787 3333 aa13.76□□□□□ -0.21
DDX41-218ENST00000625286 GJB1P08034 283 aa13.75□□□□□ -0.21
DDX41-218ENST00000625286 RHBDL3P58872 404 aa13.75□□□□□ -0.21
DDX41-218ENST00000625286 UNC93B1Q9H1C4 597 aa13.75□□□□□ -0.21
DDX41-218ENST00000625286 FAM196BA6NMK8 535 aa13.74□□□□□ -0.21
DDX41-218ENST00000625286 HOXD10P28358 340 aa13.74□□□□□ -0.21
DDX41-218ENST00000625286 BTDP43251 543 aa13.74□□□□□ -0.21
DDX41-218ENST00000625286 TFCP2Q12800 502 aa13.74□□□□□ -0.21
DDX41-218ENST00000625286 RRP1BQ14684 758 aaKnown RBP13.74□□□□□ -0.21
DDX41-218ENST00000625286 PI16Q6UXB8 463 aa13.74□□□□□ -0.21
DDX41-218ENST00000625286 CHRDL2Q6WN34 429 aa13.74□□□□□ -0.21
DDX41-218ENST00000625286 XAGE2Q96GT9 111 aa13.74□□□□□ -0.21
DDX41-218ENST00000625286 PARK7Q99497 189 aaKnown RBP13.74□□□□□ -0.21
DDX41-218ENST00000625286 RNF208Q9H0X6 261 aa13.74□□□□□ -0.21
DDX41-218ENST00000625286 PRO3102Q9H379 93 aa13.74□□□□□ -0.21
DDX41-218ENST00000625286 RBM27Q9P2N5 1060 aaKnown RBP13.74□□□□□ -0.21
DDX41-218ENST00000625286 ABCF2Q9UG63 623 aa13.74□□□□□ -0.21
DDX41-218ENST00000625286 GPR75-ASB3A0A0A6YYF3 556 aa13.73□□□□□ -0.21
DDX41-218ENST00000625286 A0A1B0GUL7 405 aa13.73□□□□□ -0.21
DDX41-218ENST00000625286 ELNP15502 786 aa13.73□□□□□ -0.21
DDX41-218ENST00000625286 FCGRTP55899 365 aa13.73□□□□□ -0.21
DDX41-218ENST00000625286 MECOMQ03112 1051 aa13.73□□□□□ -0.21
DDX41-218ENST00000625286 PICALMQ13492 652 aa13.73□□□□□ -0.21
DDX41-218ENST00000625286 TREML2Q5T2D2 321 aa13.73□□□□□ -0.21
DDX41-218ENST00000625286 GADL1Q6ZQY3 521 aa13.73□□□□□ -0.21
DDX41-218ENST00000625286 TBC1D9Q6ZT07 1266 aa13.73□□□□□ -0.21
DDX41-218ENST00000625286 DPF3Q92784 378 aa13.73□□□□□ -0.21
DDX41-218ENST00000625286 TNNQ9UQP3 1299 aa13.73□□□□□ -0.21
DDX41-218ENST00000625286 DOCK1Q14185 1865 aa13.72□□□□□ -0.21
DDX41-218ENST00000625286 PDS5AQ29RF7 1337 aaKnown RBP13.72□□□□□ -0.21
DDX41-218ENST00000625286 TRIM75PA6NK02 468 aa13.72□□□□□ -0.21
DDX41-218ENST00000625286 CTNND1O60716 968 aaKnown RBP13.72□□□□□ -0.21
DDX41-218ENST00000625286 FLT3LGP49771 235 aa13.72□□□□□ -0.21
DDX41-218ENST00000625286 RARSP54136 660 aaKnown RBP13.72□□□□□ -0.21
DDX41-218ENST00000625286 FASTKD5Q7L8L6 764 aaKnown RBP13.72□□□□□ -0.21
DDX41-218ENST00000625286 ZSCAN29Q8IWY8 852 aaPredicted RBP13.72□□□□□ -0.21
DDX41-218ENST00000625286 U2AF1L4Q8WU68 220 aaKnown RBP13.72□□□□□ -0.21
DDX41-218ENST00000625286 PICK1Q9NRD5 415 aa13.72□□□□□ -0.21
DDX41-218ENST00000625286 HMG20BQ9P0W2 317 aa13.72□□□□□ -0.21
DDX41-218ENST00000625286 SLC45A1Q9Y2W3 748 aa13.72□□□□□ -0.21
DDX41-218ENST00000625286 MROH7-TTC4A0A0A0MT08 1334 aa13.71□□□□□ -0.21
DDX41-218ENST00000625286 ADCY3O60266 1144 aa13.71□□□□□ -0.21
DDX41-218ENST00000625286 SGPL1O95470 568 aa13.71□□□□□ -0.21
DDX41-218ENST00000625286 DZIP1Q86YF9 867 aaKnown RBP13.71□□□□□ -0.21
DDX41-218ENST00000625286 API5Q9BZZ5 524 aaKnown RBP13.71□□□□□ -0.21
DDX41-218ENST00000625286 BIN2Q9UBW5 565 aaPredicted RBP13.71□□□□□ -0.21
DDX41-218ENST00000625286 COL6A3P12111 3177 aa13.71□□□□□ -0.22
DDX41-218ENST00000625286 SRGAP3O43295 1099 aa13.7□□□□□ -0.22
DDX41-218ENST00000625286 TBC1D12O60347 775 aa13.7□□□□□ -0.22
DDX41-218ENST00000625286 JAG1P78504 1218 aa13.7□□□□□ -0.22
DDX41-218ENST00000625286 MTX1Q13505 466 aa13.7□□□□□ -0.22
DDX41-218ENST00000625286 ZGPATQ8N5A5 531 aaKnown RBP13.7□□□□□ -0.22
DDX41-218ENST00000625286 ANKRD13CQ8N6S4 541 aa13.7□□□□□ -0.22
DDX41-218ENST00000625286 SLAIN1Q8ND83 568 aa13.7□□□□□ -0.22
DDX41-218ENST00000625286 NKX2-3Q8TAU0 364 aa13.7□□□□□ -0.22
DDX41-218ENST00000625286 NSUN4Q96CB9 384 aaKnown RBP13.7□□□□□ -0.22
DDX41-218ENST00000625286 ALPK3Q96L96 1907 aa13.69□□□□□ -0.22
DDX41-218ENST00000625286 NPM3O75607 178 aaKnown RBP13.69□□□□□ -0.22
DDX41-218ENST00000625286 INHAP05111 366 aa13.69□□□□□ -0.22
DDX41-218ENST00000625286 CT47B1P0C2W7 299 aaPredicted RBP13.69□□□□□ -0.22
DDX41-218ENST00000625286 IRF5Q13568 498 aa13.69□□□□□ -0.22
DDX41-218ENST00000625286 SPATA5Q8NB90 893 aa13.69□□□□□ -0.22
DDX41-218ENST00000625286 AGTPBP1Q9UPW5 1226 aa13.69□□□□□ -0.22
DDX41-218ENST00000625286 PNMA6EA0A0J9YXQ4 647 aa13.68□□□□□ -0.22
DDX41-218ENST00000625286 ZBTB7BO15156 539 aaPredicted RBP13.68□□□□□ -0.22
DDX41-218ENST00000625286 PEX10O60683 326 aa13.68□□□□□ -0.22
DDX41-218ENST00000625286 FARP2O94887 1054 aaPredicted RBP13.68□□□□□ -0.22
DDX41-218ENST00000625286 UBXN2AP68543 259 aa13.68□□□□□ -0.22
DDX41-218ENST00000625286 SPP2Q13103 211 aa13.68□□□□□ -0.22
DDX41-218ENST00000625286 SHROOM1Q2M3G4 852 aaPredicted RBP13.68□□□□□ -0.22
DDX41-218ENST00000625286 SPTY2D1Q68D10 685 aaPredicted RBP13.68□□□□□ -0.22
DDX41-218ENST00000625286 ERICH6Q7L0X2 663 aa13.68□□□□□ -0.22
DDX41-218ENST00000625286 PXYLP1Q8TE99 480 aa13.68□□□□□ -0.22
DDX41-218ENST00000625286 NEUROD6Q96NK8 337 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms