RNA–Protein interactions for RNA: ENST00000625275.2

R3HCC1-210, Transcript of R3H domain and coiled-coil containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene R3HCC1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-210ENST00000625275 FAM198AQ9UFP1 575 aa24.39■■□□□ 1.5
R3HCC1-210ENST00000625275 RFX7Q2KHR2 1363 aa24.39■■□□□ 1.5
R3HCC1-210ENST00000625275 SPTY2D1Q68D10 685 aaPredicted RBP24.38■■□□□ 1.49
R3HCC1-210ENST00000625275 B4GALNT3Q6L9W6 998 aa24.38■■□□□ 1.49
R3HCC1-210ENST00000625275 MIGA2Q7L4E1 593 aa24.38■■□□□ 1.49
R3HCC1-210ENST00000625275 RBBP6Q7Z6E9 1792 aaKnown RBP24.38■■□□□ 1.49
R3HCC1-210ENST00000625275 SLF2Q8IX21 1173 aa24.38■■□□□ 1.49
R3HCC1-210ENST00000625275 ERO1AQ96HE7 468 aa24.38■■□□□ 1.49
R3HCC1-210ENST00000625275 LRRCC1Q9C099 1032 aa24.38■■□□□ 1.49
R3HCC1-210ENST00000625275 IL1RAPL2Q9NP60 686 aa24.38■■□□□ 1.49
R3HCC1-210ENST00000625275 PPIL2Q13356 520 aa24.37■■□□□ 1.49
R3HCC1-210ENST00000625275 GORABQ5T7V8 394 aa24.37■■□□□ 1.49
R3HCC1-210ENST00000625275 ZSWIM8A7E2V4 1837 aa24.37■■□□□ 1.49
R3HCC1-210ENST00000625275 PHIPQ8WWQ0 1821 aa24.37■■□□□ 1.49
R3HCC1-210ENST00000625275 ATAD5Q96QE3 1844 aa24.37■■□□□ 1.49
R3HCC1-210ENST00000625275 KIAA0100Q14667 2235 aaKnown RBP24.37■■□□□ 1.49
R3HCC1-210ENST00000625275 FOCADQ5VW36 1801 aa24.36■■□□□ 1.49
R3HCC1-210ENST00000625275 INPP5BP32019 993 aa24.36■■□□□ 1.49
R3HCC1-210ENST00000625275 TAF1CQ15572 869 aaPredicted RBP24.36■■□□□ 1.49
R3HCC1-210ENST00000625275 IDI2Q9BXS1 227 aa24.36■■□□□ 1.49
R3HCC1-210ENST00000625275 HMG20BQ9P0W2 317 aa24.36■■□□□ 1.49
R3HCC1-210ENST00000625275 TRIM17Q9Y577 477 aa24.36■■□□□ 1.49
R3HCC1-210ENST00000625275 MROH7-TTC4A0A0A0MT08 1334 aa24.35■■□□□ 1.49
R3HCC1-210ENST00000625275 TNRC18O15417 2968 aaPredicted RBP24.35■■□□□ 1.49
R3HCC1-210ENST00000625275 SMARCA5O60264 1052 aaPredicted RBP24.35■■□□□ 1.49
R3HCC1-210ENST00000625275 CETPP11597 493 aa24.35■■□□□ 1.49
R3HCC1-210ENST00000625275 ARID4AP29374 1257 aaPredicted RBP24.35■■□□□ 1.49
R3HCC1-210ENST00000625275 RGS3P49796 1198 aa24.35■■□□□ 1.49
R3HCC1-210ENST00000625275 TNNI3KQ59H18 835 aa24.35■■□□□ 1.49
R3HCC1-210ENST00000625275 ERICH6Q7L0X2 663 aa24.35■■□□□ 1.49
R3HCC1-210ENST00000625275 OTOP1Q7RTM1 612 aa24.35■■□□□ 1.49
R3HCC1-210ENST00000625275 FAM163AQ96GL9 167 aaPredicted RBP24.35■■□□□ 1.49
R3HCC1-210ENST00000625275 GPR108Q9NPR9 543 aa24.35■■□□□ 1.49
R3HCC1-210ENST00000625275 ZNF112Q9UJU3 913 aa24.35■■□□□ 1.49
R3HCC1-210ENST00000625275 FPGT-TNNI3KV9GXZ4 949 aa24.35■■□□□ 1.49
R3HCC1-210ENST00000625275 IRF6O14896 467 aa24.34■■□□□ 1.49
R3HCC1-210ENST00000625275 ENTPD3O75355 529 aa24.34■■□□□ 1.49
R3HCC1-210ENST00000625275 SNAPC2Q13487 334 aa24.34■■□□□ 1.49
R3HCC1-210ENST00000625275 FAM43AQ8N2R8 423 aa24.34■■□□□ 1.49
R3HCC1-210ENST00000625275 SPATA5Q8NB90 893 aa24.34■■□□□ 1.49
R3HCC1-210ENST00000625275 CD99L2Q8TCZ2 262 aa24.34■■□□□ 1.49
R3HCC1-210ENST00000625275 ATRNL1Q5VV63 1379 aa24.33■■□□□ 1.49
R3HCC1-210ENST00000625275 BTDP43251 543 aa24.33■■□□□ 1.49
R3HCC1-210ENST00000625275 SP3Q02447 781 aa24.33■■□□□ 1.49
R3HCC1-210ENST00000625275 MECOMQ03112 1051 aa24.33■■□□□ 1.49
R3HCC1-210ENST00000625275 PPATQ06203 517 aa24.33■■□□□ 1.49
R3HCC1-210ENST00000625275 ANKRD45Q5TZF3 282 aa24.33■■□□□ 1.49
R3HCC1-210ENST00000625275 PI16Q6UXB8 463 aa24.33■■□□□ 1.49
R3HCC1-210ENST00000625275 ZFPM1Q8IX07 1006 aa24.33■■□□□ 1.49
R3HCC1-210ENST00000625275 EAF2Q96CJ1 260 aaPredicted RBP24.33■■□□□ 1.49
R3HCC1-210ENST00000625275 ZFYVE28Q9HCC9 887 aa24.33■■□□□ 1.49
R3HCC1-210ENST00000625275 CENPQQ7L2Z9 268 aaPredicted RBP24.32■■□□□ 1.48
R3HCC1-210ENST00000625275 CLASRPQ8N2M8 674 aaKnown RBP24.32■■□□□ 1.48
R3HCC1-210ENST00000625275 BCL11AQ9H165 835 aa24.32■■□□□ 1.48
R3HCC1-210ENST00000625275 ZCCHC17Q9NP64 241 aaKnown RBP24.32■■□□□ 1.48
R3HCC1-210ENST00000625275 UQCRFS1P1P0C7P4 283 aa24.32■■□□□ 1.48
R3HCC1-210ENST00000625275 NOL9Q5SY16 702 aaKnown RBP24.32■■□□□ 1.48
R3HCC1-210ENST00000625275 ZNF384Q8TF68 577 aa24.32■■□□□ 1.48
R3HCC1-210ENST00000625275 GTF3C3Q9Y5Q9 886 aa24.32■■□□□ 1.48
R3HCC1-210ENST00000625275 MGAMO43451 1857 aa24.31■■□□□ 1.48
R3HCC1-210ENST00000625275 HTTP42858 3142 aa24.31■■□□□ 1.48
R3HCC1-210ENST00000625275 WDHD1O75717 1129 aaPredicted RBP24.31■■□□□ 1.48
R3HCC1-210ENST00000625275 MCAMP43121 646 aa24.31■■□□□ 1.48
R3HCC1-210ENST00000625275 AACSQ86V21 672 aa24.31■■□□□ 1.48
R3HCC1-210ENST00000625275 GPR75-ASB3A0A0A6YYF3 556 aa24.3■■□□□ 1.48
R3HCC1-210ENST00000625275 BTBD19C9JJ37 291 aa24.3■■□□□ 1.48
R3HCC1-210ENST00000625275 GSTO1P78417 241 aa24.3■■□□□ 1.48
R3HCC1-210ENST00000625275 NUCB1Q02818 461 aa24.3■■□□□ 1.48
R3HCC1-210ENST00000625275 ZSCAN29Q8IWY8 852 aaPredicted RBP24.3■■□□□ 1.48
R3HCC1-210ENST00000625275 EFCC1Q9HA90 598 aa24.3■■□□□ 1.48
R3HCC1-210ENST00000625275 TBC1D9Q6ZT07 1266 aa24.29■■□□□ 1.48
R3HCC1-210ENST00000625275 SH3BP5LQ7L8J4 393 aa24.29■■□□□ 1.48
R3HCC1-210ENST00000625275 NSUN4Q96CB9 384 aaKnown RBP24.29■■□□□ 1.48
R3HCC1-210ENST00000625275 CCDC8Q9H0W5 538 aaPredicted RBP24.29■■□□□ 1.48
R3HCC1-210ENST00000625275 DDX4Q9NQI0 724 aaKnown RBP24.29■■□□□ 1.48
R3HCC1-210ENST00000625275 TLR7Q9NYK1 1049 aaKnown RBP24.29■■□□□ 1.48
R3HCC1-210ENST00000625275 DBNLQ9UJU6 430 aaKnown RBP24.29■■□□□ 1.48
R3HCC1-210ENST00000625275 KCNH4Q9UQ05 1017 aa24.29■■□□□ 1.48
R3HCC1-210ENST00000625275 SIPA1L1O43166 1804 aa24.28■■□□□ 1.48
R3HCC1-210ENST00000625275 LDHCP07864 332 aa24.28■■□□□ 1.48
R3HCC1-210ENST00000625275 RHBDL3P58872 404 aa24.28■■□□□ 1.48
R3HCC1-210ENST00000625275 PICALMQ13492 652 aa24.28■■□□□ 1.48
R3HCC1-210ENST00000625275 DBNDD2Q9BQY9 259 aa24.28■■□□□ 1.48
R3HCC1-210ENST00000625275 LNPKQ9C0E8 428 aa24.28■■□□□ 1.48
R3HCC1-210ENST00000625275 RAI14Q9P0K7 980 aa24.28■■□□□ 1.48
R3HCC1-210ENST00000625275 PTPN22Q9Y2R2 807 aa24.28■■□□□ 1.48
R3HCC1-210ENST00000625275 CAP1Q01518 475 aa24.27■■□□□ 1.48
R3HCC1-210ENST00000625275 CHD1LQ86WJ1 897 aa24.27■■□□□ 1.48
R3HCC1-210ENST00000625275 ZBTB47Q9UFB7 747 aaPredicted RBP24.27■■□□□ 1.48
R3HCC1-210ENST00000625275 COL2A1P02458 1487 aaPredicted RBP24.27■■□□□ 1.48
R3HCC1-210ENST00000625275 DDTLA6NHG4 134 aaPredicted RBP24.26■■□□□ 1.47
R3HCC1-210ENST00000625275 PHF20L1A8MW92 1017 aa24.26■■□□□ 1.47
R3HCC1-210ENST00000625275 TLR2O60603 784 aa24.26■■□□□ 1.47
R3HCC1-210ENST00000625275 TTC39AQ5SRH9 613 aa24.26■■□□□ 1.47
R3HCC1-210ENST00000625275 NPM3O75607 178 aaKnown RBP24.26■■□□□ 1.47
R3HCC1-210ENST00000625275 MAP4K4O95819 1239 aaPredicted RBP24.26■■□□□ 1.47
R3HCC1-210ENST00000625275 IFIT2P09913 472 aaKnown RBP24.26■■□□□ 1.47
R3HCC1-210ENST00000625275 CCDC158Q5M9N0 1113 aa24.26■■□□□ 1.47
R3HCC1-210ENST00000625275 LRP2BPQ9P2M1 347 aa24.26■■□□□ 1.47
R3HCC1-210ENST00000625275 MYH1P12882 1939 aa24.25■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 205.3 ms