RNA–Protein interactions for RNA: ENST00000624720.1

USB1-216, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

Gene USB1, Length 2,895 nt, Biotype TEC, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-216ENST00000624720 TATP17735 454 aaPredicted RBP10.49□□□□□ -0.73
USB1-216ENST00000624720 ADCY1Q08828 1119 aa10.49□□□□□ -0.73
USB1-216ENST00000624720 RAB3GAP1Q15042 981 aa10.49□□□□□ -0.73
USB1-216ENST00000624720 KBTBD12Q3ZCT8 623 aa10.49□□□□□ -0.73
USB1-216ENST00000624720 MICALCLQ6ZW33 695 aa10.49□□□□□ -0.73
USB1-216ENST00000624720 C11orf96Q7Z7L8 435 aa10.49□□□□□ -0.73
USB1-216ENST00000624720 ATP11CQ8NB49 1132 aa10.49□□□□□ -0.73
USB1-216ENST00000624720 SLC43A3Q8NBI5 491 aa10.49□□□□□ -0.73
USB1-216ENST00000624720 KIAA1524Q8TCG1 905 aa10.49□□□□□ -0.73
USB1-216ENST00000624720 CCDC102AQ96A19 550 aa10.49□□□□□ -0.73
USB1-216ENST00000624720 CCDC114Q96M63 670 aa10.49□□□□□ -0.73
USB1-216ENST00000624720 JADE2Q9NQC1 790 aa10.49□□□□□ -0.73
USB1-216ENST00000624720 HOMER3Q9NSC5 361 aa10.49□□□□□ -0.73
USB1-216ENST00000624720 ERLIN2O94905 339 aa10.49□□□□□ -0.73
USB1-216ENST00000624720 PROSER3Q2NL68 480 aa10.49□□□□□ -0.73
USB1-216ENST00000624720 PXDNQ92626 1479 aa10.48□□□□□ -0.73
USB1-216ENST00000624720 TRIM64CA6NLI5 447 aa10.48□□□□□ -0.73
USB1-216ENST00000624720 CLNS1AP54105 237 aaKnown RBP10.48□□□□□ -0.73
USB1-216ENST00000624720 ALDH1L2Q3SY69 923 aa10.48□□□□□ -0.73
USB1-216ENST00000624720 EPAS1Q99814 870 aa10.48□□□□□ -0.73
USB1-216ENST00000624720 TRIM4Q9C037 500 aa10.48□□□□□ -0.73
USB1-216ENST00000624720 CRB1P82279 1406 aa10.48□□□□□ -0.73
USB1-216ENST00000624720 KDRP35968 1356 aa10.48□□□□□ -0.73
USB1-216ENST00000624720 EIF3FO00303 357 aaPredicted RBP10.48□□□□□ -0.73
USB1-216ENST00000624720 RNMTO43148 476 aaKnown RBP10.48□□□□□ -0.73
USB1-216ENST00000624720 ERLIN1O75477 346 aa10.48□□□□□ -0.73
USB1-216ENST00000624720 PNMA6AP0CW24 399 aaPredicted RBP10.48□□□□□ -0.73
USB1-216ENST00000624720 DZIP1Q86YF9 867 aaKnown RBP10.48□□□□□ -0.73
USB1-216ENST00000624720 HDAC7Q8WUI4 952 aa10.48□□□□□ -0.73
USB1-216ENST00000624720 NACC2Q96BF6 587 aa10.48□□□□□ -0.73
USB1-216ENST00000624720 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.48□□□□□ -0.73
USB1-216ENST00000624720 TRMT1Q9NXH9 659 aaKnown RBP10.48□□□□□ -0.73
USB1-216ENST00000624720 ENO4A6NNW6 628 aa10.48□□□□□ -0.73
USB1-216ENST00000624720 OPA1O60313 960 aa10.48□□□□□ -0.73
USB1-216ENST00000624720 FLIIQ13045 1269 aa10.48□□□□□ -0.73
USB1-216ENST00000624720 TBC1D10BQ4KMP7 808 aaPredicted RBP10.48□□□□□ -0.73
USB1-216ENST00000624720 OLFML1Q6UWY5 402 aa10.48□□□□□ -0.73
USB1-216ENST00000624720 TMC6Q7Z403 805 aa10.48□□□□□ -0.73
USB1-216ENST00000624720 ENOX1Q8TC92 643 aaKnown RBP10.48□□□□□ -0.73
USB1-216ENST00000624720 ZBTB40Q9NUA8 1239 aa10.48□□□□□ -0.73
USB1-216ENST00000624720 EXOC6BQ9Y2D4 811 aa10.48□□□□□ -0.73
USB1-216ENST00000624720 ZBTB7BO15156 539 aaPredicted RBP10.47□□□□□ -0.73
USB1-216ENST00000624720 CYP27B1O15528 508 aa10.47□□□□□ -0.73
USB1-216ENST00000624720 DDIT3P35638 169 aa10.47□□□□□ -0.73
USB1-216ENST00000624720 POSTNQ15063 836 aa10.47□□□□□ -0.73
USB1-216ENST00000624720 TSHZ3Q63HK5 1081 aa10.47□□□□□ -0.73
USB1-216ENST00000624720 PACS1Q6VY07 963 aa10.47□□□□□ -0.73
USB1-216ENST00000624720 KAT2BQ92831 832 aa10.47□□□□□ -0.73
USB1-216ENST00000624720 DDX11Q96FC9 970 aa10.47□□□□□ -0.73
USB1-216ENST00000624720 FAM107BQ9H098 131 aa10.47□□□□□ -0.73
USB1-216ENST00000624720 GINM1Q9NU53 330 aa10.47□□□□□ -0.73
USB1-216ENST00000624720 WWC3Q9ULE0 1092 aa10.47□□□□□ -0.73
USB1-216ENST00000624720 GOLGB1Q14789 3259 aaKnown RBP10.47□□□□□ -0.73
USB1-216ENST00000624720 SKAP2O75563 359 aaPredicted RBP10.47□□□□□ -0.73
USB1-216ENST00000624720 IL4RP24394 825 aa10.47□□□□□ -0.73
USB1-216ENST00000624720 SCNN1BP51168 640 aa10.47□□□□□ -0.73
USB1-216ENST00000624720 ZNF132P52740 706 aa10.47□□□□□ -0.73
USB1-216ENST00000624720 PPP4CP60510 307 aa10.47□□□□□ -0.73
USB1-216ENST00000624720 TMEM62Q0P6H9 643 aa10.47□□□□□ -0.73
USB1-216ENST00000624720 KRT72Q14CN4 511 aa10.47□□□□□ -0.73
USB1-216ENST00000624720 AKAP4Q5JQC9 854 aa10.47□□□□□ -0.73
USB1-216ENST00000624720 C16orf71Q8IYS4 520 aaPredicted RBP10.47□□□□□ -0.73
USB1-216ENST00000624720 SNX21Q969T3 373 aa10.47□□□□□ -0.73
USB1-216ENST00000624720 SENP2Q9HC62 589 aa10.47□□□□□ -0.73
USB1-216ENST00000624720 TFIP11Q9UBB9 837 aaKnown RBP10.47□□□□□ -0.73
USB1-216ENST00000624720 GABBR1Q9UBS5 961 aa10.47□□□□□ -0.73
USB1-216ENST00000624720 MKRN1Q9UHC7 482 aaKnown RBP10.47□□□□□ -0.73
USB1-216ENST00000624720 FOSL1P15407 271 aa10.46□□□□□ -0.73
USB1-216ENST00000624720 LRSAM1Q6UWE0 723 aa10.46□□□□□ -0.73
USB1-216ENST00000624720 ARHGAP22Q7Z5H3 698 aa10.46□□□□□ -0.73
USB1-216ENST00000624720 HOOK3Q86VS8 718 aa10.46□□□□□ -0.73
USB1-216ENST00000624720 USP33Q8TEY7 942 aa10.46□□□□□ -0.73
USB1-216ENST00000624720 NUP133Q8WUM0 1156 aa10.46□□□□□ -0.73
USB1-216ENST00000624720 ANKRD65E5RJM6 399 aa10.46□□□□□ -0.74
USB1-216ENST00000624720 POU5F1Q01860 360 aaKnown RBP10.46□□□□□ -0.74
USB1-216ENST00000624720 KIAA0753Q2KHM9 967 aa10.46□□□□□ -0.74
USB1-216ENST00000624720 RNF20Q5VTR2 975 aa10.46□□□□□ -0.74
USB1-216ENST00000624720 CDCA2Q69YH5 1023 aaPredicted RBP10.46□□□□□ -0.74
USB1-216ENST00000624720 SIRT2Q8IXJ6 389 aa10.46□□□□□ -0.74
USB1-216ENST00000624720 API5Q9BZZ5 524 aaKnown RBP10.46□□□□□ -0.74
USB1-216ENST00000624720 EXOC1Q9NV70 894 aa10.46□□□□□ -0.74
USB1-216ENST00000624720 MAP3K20Q9NYL2 800 aaKnown RBP10.46□□□□□ -0.74
USB1-216ENST00000624720 MYO6Q9UM54 1294 aa10.46□□□□□ -0.74
USB1-216ENST00000624720 SPDYE3A6NKU9 549 aa10.45□□□□□ -0.74
USB1-216ENST00000624720 LRRC23Q53EV4 343 aaPredicted RBP10.45□□□□□ -0.74
USB1-216ENST00000624720 REXO1L1PQ8IX06 675 aa10.45□□□□□ -0.74
USB1-216ENST00000624720 SPDL1Q96EA4 605 aa10.45□□□□□ -0.74
USB1-216ENST00000624720 RSRC1Q96IZ7 334 aaKnown RBP10.45□□□□□ -0.74
USB1-216ENST00000624720 KLF15Q9UIH9 416 aa10.45□□□□□ -0.74
USB1-216ENST00000624720 TNS3Q68CZ2 1445 aa10.45□□□□□ -0.74
USB1-216ENST00000624720 PI4KAP2A4QPH2 592 aa10.45□□□□□ -0.74
USB1-216ENST00000624720 ERC2O15083 957 aa10.45□□□□□ -0.74
USB1-216ENST00000624720 RPS6KA5O75582 802 aa10.45□□□□□ -0.74
USB1-216ENST00000624720 EIF4A1P60842 406 aaKnown RBP10.45□□□□□ -0.74
USB1-216ENST00000624720 DDR1Q08345 913 aa10.45□□□□□ -0.74
USB1-216ENST00000624720 IQCA1Q86XH1 822 aa10.45□□□□□ -0.74
USB1-216ENST00000624720 PI4KAP1Q8N8J0 262 aa10.45□□□□□ -0.74
USB1-216ENST00000624720 SLC39A3Q9BRY0 314 aa10.45□□□□□ -0.74
USB1-216ENST00000624720 INCENPQ9NQS7 918 aa10.45□□□□□ -0.74
USB1-216ENST00000624720 TMEM63CQ9P1W3 806 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms