RNA–Protein interactions for RNA: ENST00000624341.3

ERCC6-213, Transcript of ERCC excision repair 6, chromatin remodeling factor, humanhuman

TSL 1 (best)

Gene ERCC6, Length 5,761 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6-213ENST00000624341 IFT172Q9UG01 1749 aa6.35□□□□□ -1.39
ERCC6-213ENST00000624341 CHL1O00533 1208 aa6.35□□□□□ -1.39
ERCC6-213ENST00000624341 ARHGAP6O43182 974 aa6.35□□□□□ -1.39
ERCC6-213ENST00000624341 LDHCP07864 332 aa6.35□□□□□ -1.39
ERCC6-213ENST00000624341 GRIPAP1Q4V328 841 aa6.35□□□□□ -1.39
ERCC6-213ENST00000624341 PYCARDQ9ULZ3 195 aa6.35□□□□□ -1.39
ERCC6-213ENST00000624341 CTNND2Q9UQB3 1225 aa6.35□□□□□ -1.39
ERCC6-213ENST00000624341 SAMM50Q9Y512 469 aa6.35□□□□□ -1.39
ERCC6-213ENST00000624341 BLMP54132 1417 aaPredicted RBP6.35□□□□□ -1.39
ERCC6-213ENST00000624341 TTC21AQ8NDW8 1320 aa6.35□□□□□ -1.39
ERCC6-213ENST00000624341 KIF1BO60333 1816 aa6.35□□□□□ -1.39
ERCC6-213ENST00000624341 NR1I2O75469 434 aa6.35□□□□□ -1.39
ERCC6-213ENST00000624341 NAA16Q6N069 864 aaPredicted RBP6.35□□□□□ -1.39
ERCC6-213ENST00000624341 MAGEB6Q8N7X4 407 aa6.35□□□□□ -1.39
ERCC6-213ENST00000624341 TBC1D5Q92609 795 aa6.35□□□□□ -1.39
ERCC6-213ENST00000624341 TEX13AQ9BXU3 409 aaPredicted RBP6.35□□□□□ -1.39
ERCC6-213ENST00000624341 IMPACTQ9P2X3 320 aa6.35□□□□□ -1.39
ERCC6-213ENST00000624341 TMEM110-MUSTN1A8MSY1 372 aa6.34□□□□□ -1.39
ERCC6-213ENST00000624341 DTHD1Q6ZMT9 781 aa6.34□□□□□ -1.39
ERCC6-213ENST00000624341 CCDC25Q86WR0 208 aa6.34□□□□□ -1.39
ERCC6-213ENST00000624341 TRMT44Q8IYL2 757 aaKnown RBP6.34□□□□□ -1.39
ERCC6-213ENST00000624341 PUS7Q96PZ0 661 aaKnown RBP6.34□□□□□ -1.39
ERCC6-213ENST00000624341 PSMB7Q99436 277 aa6.34□□□□□ -1.39
ERCC6-213ENST00000624341 ANTXR1Q9H6X2 564 aa6.34□□□□□ -1.39
ERCC6-213ENST00000624341 IL13P35225 146 aa6.34□□□□□ -1.39
ERCC6-213ENST00000624341 NLRP12P59046 1061 aa6.34□□□□□ -1.39
ERCC6-213ENST00000624341 STXBP4Q6ZWJ1 553 aa6.34□□□□□ -1.39
ERCC6-213ENST00000624341 LLPHQ9BRT6 129 aaKnown RBP6.34□□□□□ -1.39
ERCC6-213ENST00000624341 MAP3K19Q56UN5 1328 aa6.34□□□□□ -1.39
ERCC6-213ENST00000624341 BICDL2A1A5D9 508 aa6.34□□□□□ -1.39
ERCC6-213ENST00000624341 GOLGA6CA6NDK9 693 aa6.34□□□□□ -1.39
ERCC6-213ENST00000624341 CCDC172P0C7W6 258 aa6.34□□□□□ -1.39
ERCC6-213ENST00000624341 GOLGA6DP0CG33 693 aa6.34□□□□□ -1.39
ERCC6-213ENST00000624341 KRT9P35527 623 aa6.34□□□□□ -1.39
ERCC6-213ENST00000624341 RILPL1Q5EBL4 403 aa6.34□□□□□ -1.39
ERCC6-213ENST00000624341 C6orf163Q5TEZ5 329 aa6.34□□□□□ -1.39
ERCC6-213ENST00000624341 UBLCP1Q8WVY7 318 aaPredicted RBP6.34□□□□□ -1.39
ERCC6-213ENST00000624341 EDC3Q96F86 508 aaKnown RBP6.34□□□□□ -1.39
ERCC6-213ENST00000624341 GOLGA6AQ9NYA3 693 aa6.34□□□□□ -1.39
ERCC6-213ENST00000624341 TTF2Q9UNY4 1162 aaKnown RBP6.34□□□□□ -1.39
ERCC6-213ENST00000624341 IKBKGQ9Y6K9 419 aa6.34□□□□□ -1.39
ERCC6-213ENST00000624341 CALML3P27482 149 aa6.34□□□□□ -1.4
ERCC6-213ENST00000624341 GNAQP50148 359 aa6.34□□□□□ -1.4
ERCC6-213ENST00000624341 ADKP55263 362 aaKnown RBP6.34□□□□□ -1.4
ERCC6-213ENST00000624341 TNNI3KQ59H18 835 aa6.34□□□□□ -1.4
ERCC6-213ENST00000624341 DIS3L2Q8IYB7 885 aaKnown RBP6.34□□□□□ -1.4
ERCC6-213ENST00000624341 TMEM87AQ8NBN3 555 aa6.34□□□□□ -1.4
ERCC6-213ENST00000624341 STAMQ92783 540 aa6.34□□□□□ -1.4
ERCC6-213ENST00000624341 MYL10Q9BUA6 226 aa6.34□□□□□ -1.4
ERCC6-213ENST00000624341 PLVAPQ9BX97 442 aa6.34□□□□□ -1.4
ERCC6-213ENST00000624341 HELLSQ9NRZ9 838 aa6.34□□□□□ -1.4
ERCC6-213ENST00000624341 RASAL2Q9UJF2 1139 aa6.34□□□□□ -1.4
ERCC6-213ENST00000624341 MTMR6Q9Y217 621 aa6.34□□□□□ -1.4
ERCC6-213ENST00000624341 FPGT-TNNI3KV9GXZ4 949 aa6.34□□□□□ -1.4
ERCC6-213ENST00000624341 NPC1L1Q9UHC9 1359 aa6.34□□□□□ -1.4
ERCC6-213ENST00000624341 USP19O94966 1318 aa6.34□□□□□ -1.4
ERCC6-213ENST00000624341 CLTCL1P53675 1640 aa6.33□□□□□ -1.4
ERCC6-213ENST00000624341 KIAA1210Q9ULL0 1709 aa6.33□□□□□ -1.4
ERCC6-213ENST00000624341 INPP5BP32019 993 aa6.33□□□□□ -1.4
ERCC6-213ENST00000624341 GJC1P36383 396 aa6.33□□□□□ -1.4
ERCC6-213ENST00000624341 TNNC1P63316 161 aa6.33□□□□□ -1.4
ERCC6-213ENST00000624341 NAA25Q14CX7 972 aa6.33□□□□□ -1.4
ERCC6-213ENST00000624341 ZSCAN26Q16670 478 aa6.33□□□□□ -1.4
ERCC6-213ENST00000624341 UTP14CQ5TAP6 766 aaKnown RBP6.33□□□□□ -1.4
ERCC6-213ENST00000624341 KRT79Q5XKE5 535 aa6.33□□□□□ -1.4
ERCC6-213ENST00000624341 TTC6Q86TZ1 520 aa6.33□□□□□ -1.4
ERCC6-213ENST00000624341 PPP1R14CQ8TAE6 165 aa6.33□□□□□ -1.4
ERCC6-213ENST00000624341 PHKBQ93100 1093 aa6.33□□□□□ -1.4
ERCC6-213ENST00000624341 CEP63Q96MT8 703 aa6.33□□□□□ -1.4
ERCC6-213ENST00000624341 SLF1Q9BQI6 1058 aa6.33□□□□□ -1.4
ERCC6-213ENST00000624341 NRBP1Q9UHY1 535 aa6.33□□□□□ -1.4
ERCC6-213ENST00000624341 FLT4P35916 1363 aa6.33□□□□□ -1.4
ERCC6-213ENST00000624341 MAP3K5Q99683 1374 aa6.33□□□□□ -1.4
ERCC6-213ENST00000624341 PTH1RQ03431 593 aa6.33□□□□□ -1.4
ERCC6-213ENST00000624341 SF3A3Q12874 501 aaKnown RBP eCLIP6.33□□□□□ -1.4
ERCC6-213ENST00000624341 CCDC152Q4G0S7 254 aa6.33□□□□□ -1.4
ERCC6-213ENST00000624341 PAXIP1Q6ZW49 1069 aaPredicted RBP6.33□□□□□ -1.4
ERCC6-213ENST00000624341 LMBR1Q8WVP7 490 aa6.33□□□□□ -1.4
ERCC6-213ENST00000624341 CCDC77Q9BR77 488 aa6.33□□□□□ -1.4
ERCC6-213ENST00000624341 NOC4LQ9BVI4 516 aaKnown RBP6.33□□□□□ -1.4
ERCC6-213ENST00000624341 KCNK9Q9NPC2 374 aa6.33□□□□□ -1.4
ERCC6-213ENST00000624341 MYO5BQ9ULV0 1848 aa6.33□□□□□ -1.4
ERCC6-213ENST00000624341 LAMC1P11047 1609 aa6.33□□□□□ -1.4
ERCC6-213ENST00000624341 DCCP43146 1447 aa6.33□□□□□ -1.4
ERCC6-213ENST00000624341 EXOC5O00471 708 aa6.33□□□□□ -1.4
ERCC6-213ENST00000624341 ERCC3P19447 782 aa6.33□□□□□ -1.4
ERCC6-213ENST00000624341 ZBTB16Q05516 673 aa6.33□□□□□ -1.4
ERCC6-213ENST00000624341 C8orf74Q6P047 294 aa6.33□□□□□ -1.4
ERCC6-213ENST00000624341 CCDC174Q6PII3 467 aa6.33□□□□□ -1.4
ERCC6-213ENST00000624341 CYP26C1Q6V0L0 522 aa6.33□□□□□ -1.4
ERCC6-213ENST00000624341 MLKLQ8NB16 471 aa6.33□□□□□ -1.4
ERCC6-213ENST00000624341 DESI2Q9BSY9 194 aa6.33□□□□□ -1.4
ERCC6-213ENST00000624341 DDX21Q9NR30 783 aaKnown RBP eCLIP6.33□□□□□ -1.4
ERCC6-213ENST00000624341 TAB2Q9NYJ8 693 aa6.33□□□□□ -1.4
ERCC6-213ENST00000624341 MRVI1Q9Y6F6 885 aa6.33□□□□□ -1.4
ERCC6-213ENST00000624341 JCADQ9P266 1359 aa6.33□□□□□ -1.4
ERCC6-213ENST00000624341 MAGEB6P1A0A0J9YX57 407 aa6.33□□□□□ -1.4
ERCC6-213ENST00000624341 MBD4O95243 580 aa6.33□□□□□ -1.4
ERCC6-213ENST00000624341 TNNI2P48788 182 aa6.33□□□□□ -1.4
ERCC6-213ENST00000624341 MXRA7P84157 204 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms