RNA–Protein interactions for RNA: ENST00000623535.1

CDKL5-205, Transcript of cyclin dependent kinase like 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKL5, Length 12,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-205ENST00000623535 NR2E3Q9Y5X4 410 aa7.03□□□□□ -1.28
CDKL5-205ENST00000623535 MCM9Q9NXL9 1143 aa7.03□□□□□ -1.28
CDKL5-205ENST00000623535 BICDL2A1A5D9 508 aa7.02□□□□□ -1.28
CDKL5-205ENST00000623535 MYCLP12524 364 aaPredicted RBP7.02□□□□□ -1.28
CDKL5-205ENST00000623535 IWS1Q96ST2 819 aa7.02□□□□□ -1.28
CDKL5-205ENST00000623535 NPM3O75607 178 aaKnown RBP7.02□□□□□ -1.29
CDKL5-205ENST00000623535 MICALL1Q8N3F8 863 aa7.02□□□□□ -1.29
CDKL5-205ENST00000623535 KBTBD13C9JR72 458 aa7.02□□□□□ -1.29
CDKL5-205ENST00000623535 ARHGEF10O15013 1369 aa7.02□□□□□ -1.29
CDKL5-205ENST00000623535 EPB41P11171 864 aaKnown RBP7.02□□□□□ -1.29
CDKL5-205ENST00000623535 PGBD3Q8N328 593 aa7.02□□□□□ -1.29
CDKL5-205ENST00000623535 TMEM247A6NEH6 219 aa7.02□□□□□ -1.29
CDKL5-205ENST00000623535 CCDC169A6NNP5 214 aa7.02□□□□□ -1.29
CDKL5-205ENST00000623535 SARNPP82979 210 aaKnown RBP7.02□□□□□ -1.29
CDKL5-205ENST00000623535 TSTA3Q13630 321 aaPredicted RBP7.02□□□□□ -1.29
CDKL5-205ENST00000623535 TCP11L2Q8N4U5 519 aa7.02□□□□□ -1.29
CDKL5-205ENST00000623535 GPR161Q8N6U8 529 aaKnown RBP7.02□□□□□ -1.29
CDKL5-205ENST00000623535 PLB1Q6P1J6 1458 aa7.02□□□□□ -1.29
CDKL5-205ENST00000623535 ARHGEF16Q5VV41 709 aa7.02□□□□□ -1.29
CDKL5-205ENST00000623535 DPF3Q92784 378 aa7.02□□□□□ -1.29
CDKL5-205ENST00000623535 MGEA5O60502 916 aa7.02□□□□□ -1.29
CDKL5-205ENST00000623535 ATP2C2O75185 946 aa7.02□□□□□ -1.29
CDKL5-205ENST00000623535 SKA1Q96BD8 255 aa7.02□□□□□ -1.29
CDKL5-205ENST00000623535 PPP1R9AQ9ULJ8 1098 aa7.02□□□□□ -1.29
CDKL5-205ENST00000623535 KRT5P13647 590 aa7.02□□□□□ -1.29
CDKL5-205ENST00000623535 METAP2P50579 478 aaKnown RBP eCLIP7.02□□□□□ -1.29
CDKL5-205ENST00000623535 RPRD1BQ9NQG5 326 aaKnown RBP7.02□□□□□ -1.29
CDKL5-205ENST00000623535 BAG5Q9UL15 447 aa7.02□□□□□ -1.29
CDKL5-205ENST00000623535 TTLL3Q9Y4R7 772 aa7.02□□□□□ -1.29
CDKL5-205ENST00000623535 ZNF212Q9UDV6 495 aa7.02□□□□□ -1.29
CDKL5-205ENST00000623535 SLC4A4Q9Y6R1 1079 aa7.02□□□□□ -1.29
CDKL5-205ENST00000623535 C16orf45Q96MC5 204 aaPredicted RBP7.02□□□□□ -1.29
CDKL5-205ENST00000623535 MYCP01106 439 aaPredicted RBP7.01□□□□□ -1.29
CDKL5-205ENST00000623535 UIMC1Q96RL1 719 aa7.01□□□□□ -1.29
CDKL5-205ENST00000623535 STN1Q9H668 368 aaKnown RBP7.01□□□□□ -1.29
CDKL5-205ENST00000623535 BTG4Q9NY30 223 aa7.01□□□□□ -1.29
CDKL5-205ENST00000623535 DDX5P17844 614 aaKnown RBP7.01□□□□□ -1.29
CDKL5-205ENST00000623535 LGSNQ5TDP6 509 aa7.01□□□□□ -1.29
CDKL5-205ENST00000623535 PPP4R4Q6NUP7 873 aa7.01□□□□□ -1.29
CDKL5-205ENST00000623535 CSRNP1Q96S65 589 aa7.01□□□□□ -1.29
CDKL5-205ENST00000623535 SH2B1Q9NRF2 756 aaPredicted RBP7.01□□□□□ -1.29
CDKL5-205ENST00000623535 RSRC2Q7L4I2 434 aaKnown RBP7.01□□□□□ -1.29
CDKL5-205ENST00000623535 TTC25Q96NG3 672 aa7.01□□□□□ -1.29
CDKL5-205ENST00000623535 CCDC141Q6ZP82 1450 aa7.01□□□□□ -1.29
CDKL5-205ENST00000623535 DUSP27Q5VZP5 1158 aa7.01□□□□□ -1.29
CDKL5-205ENST00000623535 ARMCX5Q6P1M9 558 aa7.01□□□□□ -1.29
CDKL5-205ENST00000623535 ATP2A3Q93084 1043 aa7.01□□□□□ -1.29
CDKL5-205ENST00000623535 TRIM47Q96LD4 638 aa7.01□□□□□ -1.29
CDKL5-205ENST00000623535 CTAGE1Q96RT6 745 aa7.01□□□□□ -1.29
CDKL5-205ENST00000623535 MTUS1Q9ULD2 1270 aa7.01□□□□□ -1.29
CDKL5-205ENST00000623535 GADD45BO75293 160 aaPredicted RBP7.01□□□□□ -1.29
CDKL5-205ENST00000623535 ABCD1P33897 745 aa7.01□□□□□ -1.29
CDKL5-205ENST00000623535 GJC1P36383 396 aa7.01□□□□□ -1.29
CDKL5-205ENST00000623535 NPY2RP49146 381 aa7.01□□□□□ -1.29
CDKL5-205ENST00000623535 C2CD5Q86YS7 1000 aa7.01□□□□□ -1.29
CDKL5-205ENST00000623535 TEX11Q8IYF3 940 aa7.01□□□□□ -1.29
CDKL5-205ENST00000623535 KRT3P12035 628 aa7.01□□□□□ -1.29
CDKL5-205ENST00000623535 NBPF20Q3BBV1 942 aa7.01□□□□□ -1.29
CDKL5-205ENST00000623535 PSMD2Q13200 908 aa7.01□□□□□ -1.29
CDKL5-205ENST00000623535 PHKG1Q16816 387 aa7.01□□□□□ -1.29
CDKL5-205ENST00000623535 NSMFQ6X4W1 530 aa7.01□□□□□ -1.29
CDKL5-205ENST00000623535 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.01□□□□□ -1.29
CDKL5-205ENST00000623535 OLFML3Q9NRN5 406 aa7.01□□□□□ -1.29
CDKL5-205ENST00000623535 HECW1Q76N89 1606 aa7.01□□□□□ -1.29
CDKL5-205ENST00000623535 ATAD2BQ9ULI0 1458 aa7.01□□□□□ -1.29
CDKL5-205ENST00000623535 MCM5P33992 734 aa7.01□□□□□ -1.29
CDKL5-205ENST00000623535 TMTC4Q5T4D3 741 aa7.01□□□□□ -1.29
CDKL5-205ENST00000623535 TRIM50Q86XT4 487 aa7.01□□□□□ -1.29
CDKL5-205ENST00000623535 TMTC1Q8IUR5 882 aa7.01□□□□□ -1.29
CDKL5-205ENST00000623535 CCDC102AQ96A19 550 aa7.01□□□□□ -1.29
CDKL5-205ENST00000623535 SPON1Q9HCB6 807 aa7.01□□□□□ -1.29
CDKL5-205ENST00000623535 SERPINA10Q9UK55 444 aa7.01□□□□□ -1.29
CDKL5-205ENST00000623535 PSMA7O14818 248 aa7.01□□□□□ -1.29
CDKL5-205ENST00000623535 SREBF2Q12772 1141 aa7.01□□□□□ -1.29
CDKL5-205ENST00000623535 DEPTORQ8TB45 409 aa7.01□□□□□ -1.29
CDKL5-205ENST00000623535 ADGRL1O94910 1474 aa7.01□□□□□ -1.29
CDKL5-205ENST00000623535 POTEB2H3BUK9 544 aa7.01□□□□□ -1.29
CDKL5-205ENST00000623535 PSMA3P25788 255 aa7.01□□□□□ -1.29
CDKL5-205ENST00000623535 HAUS6Q7Z4H7 955 aa7.01□□□□□ -1.29
CDKL5-205ENST00000623535 ARHGEF35A5YM69 484 aa7□□□□□ -1.29
CDKL5-205ENST00000623535 PPFIA2O75334 1257 aa7□□□□□ -1.29
CDKL5-205ENST00000623535 PPP1R2P41236 205 aa7□□□□□ -1.29
CDKL5-205ENST00000623535 KRT19P08727 400 aa7□□□□□ -1.29
CDKL5-205ENST00000623535 AMPD2Q01433 879 aa7□□□□□ -1.29
CDKL5-205ENST00000623535 CCDC170Q8IYT3 715 aa7□□□□□ -1.29
CDKL5-205ENST00000623535 NOP14P78316 857 aaKnown RBP7□□□□□ -1.29
CDKL5-205ENST00000623535 DRP2Q13474 957 aa7□□□□□ -1.29
CDKL5-205ENST00000623535 FAM98CQ17RN3 349 aaKnown RBP7□□□□□ -1.29
CDKL5-205ENST00000623535 CHST3Q7LGC8 479 aa7□□□□□ -1.29
CDKL5-205ENST00000623535 HVCN1Q96D96 273 aa7□□□□□ -1.29
CDKL5-205ENST00000623535 TOP2AP11388 1531 aaKnown RBP7□□□□□ -1.29
CDKL5-205ENST00000623535 TBC1D12O60347 775 aa7□□□□□ -1.29
CDKL5-205ENST00000623535 ZNF467Q7Z7K2 595 aaPredicted RBP7□□□□□ -1.29
CDKL5-205ENST00000623535 TBC1D19Q8N5T2 526 aa7□□□□□ -1.29
CDKL5-205ENST00000623535 NFATC2IPQ8NCF5 419 aa7□□□□□ -1.29
CDKL5-205ENST00000623535 NEMP1O14524 444 aa7□□□□□ -1.29
CDKL5-205ENST00000623535 MNAT1P51948 309 aa7□□□□□ -1.29
CDKL5-205ENST00000623535 CSPG5O95196 566 aa7□□□□□ -1.29
CDKL5-205ENST00000623535 RRS1Q15050 365 aaKnown RBP7□□□□□ -1.29
CDKL5-205ENST00000623535 PPIP5K1Q6PFW1 1433 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms