RNA–Protein interactions for RNA: ENST00000622645.4

TP53-227, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,653 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-227ENST00000622645 CEP57L1Q8IYX8 460 aa13.88□□□□□ -0.19
TP53-227ENST00000622645 CDC5LQ99459 802 aaKnown RBP13.88□□□□□ -0.19
TP53-227ENST00000622645 KRT23Q9C075 422 aa13.88□□□□□ -0.19
TP53-227ENST00000622645 ZNF652Q9Y2D9 606 aa13.88□□□□□ -0.19
TP53-227ENST00000622645 MROH7-TTC4A0A0A0MT08 1334 aa13.88□□□□□ -0.19
TP53-227ENST00000622645 PNPLA7Q6ZV29 1317 aa13.88□□□□□ -0.19
TP53-227ENST00000622645 RTL9Q8NET4 1388 aa13.88□□□□□ -0.19
TP53-227ENST00000622645 BIN1O00499 593 aa13.87□□□□□ -0.19
TP53-227ENST00000622645 GNAT2P19087 354 aa13.87□□□□□ -0.19
TP53-227ENST00000622645 GUCY1A2P33402 732 aa13.87□□□□□ -0.19
TP53-227ENST00000622645 SARM1Q6SZW1 724 aa13.87□□□□□ -0.19
TP53-227ENST00000622645 CMTR1Q8N1G2 835 aaKnown RBP13.87□□□□□ -0.19
TP53-227ENST00000622645 CACTINQ8WUQ7 758 aaKnown RBP13.87□□□□□ -0.19
TP53-227ENST00000622645 STAG1Q8WVM7 1258 aa13.87□□□□□ -0.19
TP53-227ENST00000622645 ARAP2Q8WZ64 1704 aa13.87□□□□□ -0.19
TP53-227ENST00000622645 CMA1P23946 247 aa13.87□□□□□ -0.19
TP53-227ENST00000622645 TRIM29Q14134 588 aa13.87□□□□□ -0.19
TP53-227ENST00000622645 LINC00116Q8NCU8 138 aa13.87□□□□□ -0.19
TP53-227ENST00000622645 RAI14Q9P0K7 980 aa13.87□□□□□ -0.19
TP53-227ENST00000622645 MINDY4BA8MYZ0 360 aa13.87□□□□□ -0.19
TP53-227ENST00000622645 SSRP1Q08945 709 aaKnown RBP13.87□□□□□ -0.19
TP53-227ENST00000622645 PTPAQ15257 358 aa13.87□□□□□ -0.19
TP53-227ENST00000622645 ANKRD18AQ8IVF6 992 aa13.87□□□□□ -0.19
TP53-227ENST00000622645 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.87□□□□□ -0.19
TP53-227ENST00000622645 SLC3A2P08195 630 aaKnown RBP13.86□□□□□ -0.19
TP53-227ENST00000622645 U2AF2P26368 475 aaKnown RBP eCLIP13.86□□□□□ -0.19
TP53-227ENST00000622645 ARID5BQ14865 1188 aa13.86□□□□□ -0.19
TP53-227ENST00000622645 WTAPQ15007 396 aa13.86□□□□□ -0.19
TP53-227ENST00000622645 MYRIPQ8NFW9 859 aa13.86□□□□□ -0.19
TP53-227ENST00000622645 SMARCC1Q92922 1105 aaPredicted RBP13.86□□□□□ -0.19
TP53-227ENST00000622645 CLIC6Q96NY7 704 aa13.86□□□□□ -0.19
TP53-227ENST00000622645 MAP3K14Q99558 947 aa13.86□□□□□ -0.19
TP53-227ENST00000622645 NAT10Q9H0A0 1025 aaKnown RBP13.86□□□□□ -0.19
TP53-227ENST00000622645 DYNC1I1O14576 645 aa13.86□□□□□ -0.19
TP53-227ENST00000622645 PPARAQ07869 468 aa13.86□□□□□ -0.19
TP53-227ENST00000622645 ZRSR1Q15695 479 aaKnown RBP13.86□□□□□ -0.19
TP53-227ENST00000622645 FAM98CQ17RN3 349 aaKnown RBP13.86□□□□□ -0.19
TP53-227ENST00000622645 ISM2Q6H9L7 571 aa13.86□□□□□ -0.19
TP53-227ENST00000622645 SHC4Q6S5L8 630 aa13.86□□□□□ -0.19
TP53-227ENST00000622645 CLEC4GQ6UXB4 293 aa13.86□□□□□ -0.19
TP53-227ENST00000622645 BARGINQ6ZT62 677 aa13.86□□□□□ -0.19
TP53-227ENST00000622645 PTF1AQ7RTS3 328 aa13.86□□□□□ -0.19
TP53-227ENST00000622645 BCL9LQ86UU0 1499 aa13.86□□□□□ -0.19
TP53-227ENST00000622645 TSC1Q92574 1164 aa13.86□□□□□ -0.19
TP53-227ENST00000622645 MRFAP1L1Q96HT8 127 aa13.86□□□□□ -0.19
TP53-227ENST00000622645 PRIMPOLQ96LW4 560 aa13.86□□□□□ -0.19
TP53-227ENST00000622645 ZNF804BA4D1E1 1349 aa13.85□□□□□ -0.19
TP53-227ENST00000622645 BTBD18B2RXH4 712 aa13.85□□□□□ -0.19
TP53-227ENST00000622645 FMNL1O95466 1100 aaPredicted RBP13.85□□□□□ -0.19
TP53-227ENST00000622645 IFNAR1P17181 557 aa13.85□□□□□ -0.19
TP53-227ENST00000622645 CDC25BP30305 580 aa13.85□□□□□ -0.19
TP53-227ENST00000622645 RGS22Q8NE09 1264 aa13.85□□□□□ -0.19
TP53-227ENST00000622645 CELF1Q92879 486 aaKnown RBP13.85□□□□□ -0.19
TP53-227ENST00000622645 KCNJ14Q9UNX9 436 aa13.85□□□□□ -0.19
TP53-227ENST00000622645 DOCK2Q92608 1830 aa13.85□□□□□ -0.19
TP53-227ENST00000622645 PHLPP1O60346 1717 aa13.85□□□□□ -0.19
TP53-227ENST00000622645 GTF2E1P29083 439 aaPredicted RBP13.85□□□□□ -0.19
TP53-227ENST00000622645 SART3Q15020 963 aaKnown RBP13.85□□□□□ -0.19
TP53-227ENST00000622645 RTN1Q16799 776 aa13.85□□□□□ -0.19
TP53-227ENST00000622645 FILIP1Q7Z7B0 1213 aa13.85□□□□□ -0.19
TP53-227ENST00000622645 NUP133Q8WUM0 1156 aa13.85□□□□□ -0.19
TP53-227ENST00000622645 MINPP1Q9UNW1 487 aa13.85□□□□□ -0.19
TP53-227ENST00000622645 MAGEB6P1A0A0J9YX57 407 aa13.84□□□□□ -0.19
TP53-227ENST00000622645 ERICH2A1L162 156 aa13.84□□□□□ -0.19
TP53-227ENST00000622645 SYKP43405 635 aa13.84□□□□□ -0.19
TP53-227ENST00000622645 SF3B3Q15393 1217 aaKnown RBP13.84□□□□□ -0.19
TP53-227ENST00000622645 PDCL3Q9H2J4 239 aa13.84□□□□□ -0.19
TP53-227ENST00000622645 NRAPQ86VF7 1730 aa13.84□□□□□ -0.19
TP53-227ENST00000622645 PPP6R2O75170 966 aa13.84□□□□□ -0.19
TP53-227ENST00000622645 PIP4K2BP78356 416 aa13.84□□□□□ -0.19
TP53-227ENST00000622645 GLIPR1L2Q4G1C9 344 aa13.84□□□□□ -0.19
TP53-227ENST00000622645 TBC1D9BQ66K14 1250 aa13.84□□□□□ -0.19
TP53-227ENST00000622645 GNL3LQ9NVN8 582 aaKnown RBP13.84□□□□□ -0.19
TP53-227ENST00000622645 BSDC1Q9NW68 430 aaPredicted RBP13.84□□□□□ -0.19
TP53-227ENST00000622645 COL1A1P02452 1464 aaPredicted RBP13.84□□□□□ -0.19
TP53-227ENST00000622645 STK36Q9NRP7 1315 aa13.83□□□□□ -0.2
TP53-227ENST00000622645 CYP2D7A0A087X1C5 515 aa13.83□□□□□ -0.2
TP53-227ENST00000622645 DYNLL1P63167 89 aaKnown RBP13.83□□□□□ -0.2
TP53-227ENST00000622645 UBE4AQ14139 1066 aa13.83□□□□□ -0.2
TP53-227ENST00000622645 LRRC8AQ8IWT6 810 aa13.83□□□□□ -0.2
TP53-227ENST00000622645 CCDC24Q8N4L8 307 aa13.83□□□□□ -0.2
TP53-227ENST00000622645 FAM84BQ96KN1 310 aaPredicted RBP13.83□□□□□ -0.2
TP53-227ENST00000622645 RIOK1Q9BRS2 568 aaKnown RBP13.83□□□□□ -0.2
TP53-227ENST00000622645 UBAC1Q9BSL1 405 aa13.83□□□□□ -0.2
TP53-227ENST00000622645 RNF41Q9H4P4 317 aaPredicted RBP13.83□□□□□ -0.2
TP53-227ENST00000622645 HPSEQ9Y251 543 aa13.83□□□□□ -0.2
TP53-227ENST00000622645 MMP1P03956 469 aa13.83□□□□□ -0.2
TP53-227ENST00000622645 KLRK1P26718 216 aa13.83□□□□□ -0.2
TP53-227ENST00000622645 CAVIN4Q5BKX8 364 aa13.83□□□□□ -0.2
TP53-227ENST00000622645 NBPF11Q86T75 865 aa13.83□□□□□ -0.2
TP53-227ENST00000622645 NOSTRINQ8IVI9 506 aa13.83□□□□□ -0.2
TP53-227ENST00000622645 DIS3L2Q8IYB7 885 aaKnown RBP13.83□□□□□ -0.2
TP53-227ENST00000622645 TRIM22Q8IYM9 498 aa13.83□□□□□ -0.2
TP53-227ENST00000622645 ZNF654Q8IZM8 581 aa13.83□□□□□ -0.2
TP53-227ENST00000622645 JMYQ8N9B5 988 aa13.83□□□□□ -0.2
TP53-227ENST00000622645 FANCBQ8NB91 859 aa13.83□□□□□ -0.2
TP53-227ENST00000622645 ZNF384Q8TF68 577 aa13.83□□□□□ -0.2
TP53-227ENST00000622645 TAF1P21675 1872 aa13.82□□□□□ -0.2
TP53-227ENST00000622645 RREB1Q92766 1687 aa13.82□□□□□ -0.2
TP53-227ENST00000622645 NLRP12P59046 1061 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms