RNA–Protein interactions for RNA: ENST00000622166.1

IGHV3-54-201, Transcript of immunoglobulin heavy variable 3-54 (pseudogene), humanhuman

BASIC

Gene IGHV3-54, Length 353 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-54-201ENST00000622166 SENP2Q9HC62 589 aa11.12□□□□□ -0.63
IGHV3-54-201ENST00000622166 BTG4Q9NY30 223 aa11.12□□□□□ -0.63
IGHV3-54-201ENST00000622166 TACC3Q9Y6A5 838 aa11.12□□□□□ -0.63
IGHV3-54-201ENST00000622166 MORC2Q9Y6X9 1032 aaPredicted RBP11.12□□□□□ -0.63
IGHV3-54-201ENST00000622166 COL16A1Q07092 1604 aaPredicted RBP11.12□□□□□ -0.63
IGHV3-54-201ENST00000622166 ZNF335Q9H4Z2 1342 aaPredicted RBP11.11□□□□□ -0.63
IGHV3-54-201ENST00000622166 EXOC5O00471 708 aa11.11□□□□□ -0.63
IGHV3-54-201ENST00000622166 IFIT3O14879 490 aaKnown RBP11.11□□□□□ -0.63
IGHV3-54-201ENST00000622166 MBD4O95243 580 aa11.11□□□□□ -0.63
IGHV3-54-201ENST00000622166 TUBB4AP04350 444 aa11.11□□□□□ -0.63
IGHV3-54-201ENST00000622166 PARP10Q53GL7 1025 aa11.11□□□□□ -0.63
IGHV3-54-201ENST00000622166 NFXL1Q6ZNB6 911 aa11.11□□□□□ -0.63
IGHV3-54-201ENST00000622166 PDCL2Q8N4E4 241 aa11.11□□□□□ -0.63
IGHV3-54-201ENST00000622166 CCDC112Q8NEF3 446 aa11.11□□□□□ -0.63
IGHV3-54-201ENST00000622166 ERCC4Q92889 916 aaPredicted RBP11.11□□□□□ -0.63
IGHV3-54-201ENST00000622166 XPO4Q9C0E2 1151 aaKnown RBP11.11□□□□□ -0.63
IGHV3-54-201ENST00000622166 NAPBQ9H115 298 aa11.11□□□□□ -0.63
IGHV3-54-201ENST00000622166 IFNKQ9P0W0 207 aa11.11□□□□□ -0.63
IGHV3-54-201ENST00000622166 ZSWIM5Q9P217 1185 aa11.11□□□□□ -0.63
IGHV3-54-201ENST00000622166 A0A1B0GUL6 1792 aa11.11□□□□□ -0.63
IGHV3-54-201ENST00000622166 PSDA5PKW4 1024 aaPredicted RBP11.1□□□□□ -0.63
IGHV3-54-201ENST00000622166 CBFA2T2O43439 604 aa11.1□□□□□ -0.63
IGHV3-54-201ENST00000622166 MARCKSP29966 332 aaPredicted RBP11.1□□□□□ -0.63
IGHV3-54-201ENST00000622166 CTDSPL2Q05D32 466 aa11.1□□□□□ -0.63
IGHV3-54-201ENST00000622166 NCBP1Q09161 790 aaKnown RBP11.1□□□□□ -0.63
IGHV3-54-201ENST00000622166 RASGRF1Q13972 1273 aa11.1□□□□□ -0.63
IGHV3-54-201ENST00000622166 PTPN14Q15678 1187 aa11.1□□□□□ -0.63
IGHV3-54-201ENST00000622166 SUSD4Q5VX71 490 aa11.1□□□□□ -0.63
IGHV3-54-201ENST00000622166 INTS5Q6P9B9 1019 aaKnown RBP11.1□□□□□ -0.63
IGHV3-54-201ENST00000622166 KRBA2Q6ZNG9 492 aa11.1□□□□□ -0.63
IGHV3-54-201ENST00000622166 FILIP1Q7Z7B0 1213 aa11.1□□□□□ -0.63
IGHV3-54-201ENST00000622166 TMTC2Q8N394 836 aa11.1□□□□□ -0.63
IGHV3-54-201ENST00000622166 MAGEB6Q8N7X4 407 aa11.1□□□□□ -0.63
IGHV3-54-201ENST00000622166 HELBQ8NG08 1087 aaPredicted RBP11.1□□□□□ -0.63
IGHV3-54-201ENST00000622166 PHKBQ93100 1093 aa11.1□□□□□ -0.63
IGHV3-54-201ENST00000622166 NOL10Q9BSC4 688 aaKnown RBP11.1□□□□□ -0.63
IGHV3-54-201ENST00000622166 UTP14AQ9BVJ6 771 aaKnown RBP11.1□□□□□ -0.63
IGHV3-54-201ENST00000622166 ARMT1Q9H993 441 aa11.1□□□□□ -0.63
IGHV3-54-201ENST00000622166 CCDC87Q9NVE4 849 aa11.1□□□□□ -0.63
IGHV3-54-201ENST00000622166 SLC12A7Q9Y666 1083 aa11.1□□□□□ -0.63
IGHV3-54-201ENST00000622166 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.09□□□□□ -0.63
IGHV3-54-201ENST00000622166 USP27XA6NNY8 438 aa11.09□□□□□ -0.63
IGHV3-54-201ENST00000622166 FAM177BA6PVY3 158 aa11.09□□□□□ -0.63
IGHV3-54-201ENST00000622166 MMP1P03956 469 aa11.09□□□□□ -0.63
IGHV3-54-201ENST00000622166 FANCCQ00597 558 aa11.09□□□□□ -0.63
IGHV3-54-201ENST00000622166 GNL2Q13823 731 aaKnown RBP11.09□□□□□ -0.63
IGHV3-54-201ENST00000622166 ARMCX5Q6P1M9 558 aa11.09□□□□□ -0.63
IGHV3-54-201ENST00000622166 MFSD6Q6ZSS7 791 aa11.09□□□□□ -0.63
IGHV3-54-201ENST00000622166 TMC6Q7Z403 805 aa11.09□□□□□ -0.63
IGHV3-54-201ENST00000622166 MICU3Q86XE3 530 aa11.09□□□□□ -0.63
IGHV3-54-201ENST00000622166 NOSTRINQ8IVI9 506 aa11.09□□□□□ -0.63
IGHV3-54-201ENST00000622166 CDCA7Q9BWT1 371 aaPredicted RBP11.09□□□□□ -0.63
IGHV3-54-201ENST00000622166 SLC26A6Q9BXS9 759 aa11.09□□□□□ -0.63
IGHV3-54-201ENST00000622166 NACAP1Q9BZK3 213 aa11.09□□□□□ -0.63
IGHV3-54-201ENST00000622166 HSD3B7Q9H2F3 369 aa11.09□□□□□ -0.63
IGHV3-54-201ENST00000622166 FOXP1Q9H334 677 aaPredicted RBP11.09□□□□□ -0.63
IGHV3-54-201ENST00000622166 ANAPC4Q9UJX5 808 aa11.09□□□□□ -0.63
IGHV3-54-201ENST00000622166 DLEC1Q9Y238 1755 aa11.08□□□□□ -0.64
IGHV3-54-201ENST00000622166 BCL9LQ86UU0 1499 aa11.08□□□□□ -0.64
IGHV3-54-201ENST00000622166 BIN1O00499 593 aa11.08□□□□□ -0.64
IGHV3-54-201ENST00000622166 CAMTA2O94983 1202 aa11.08□□□□□ -0.64
IGHV3-54-201ENST00000622166 SMC2O95347 1197 aa11.08□□□□□ -0.64
IGHV3-54-201ENST00000622166 RXRAP19793 462 aa11.08□□□□□ -0.64
IGHV3-54-201ENST00000622166 PTPREP23469 700 aa11.08□□□□□ -0.64
IGHV3-54-201ENST00000622166 MDM2Q00987 491 aaPredicted RBP11.08□□□□□ -0.64
IGHV3-54-201ENST00000622166 MYL5Q02045 173 aa11.08□□□□□ -0.64
IGHV3-54-201ENST00000622166 PPP2R5BQ15173 497 aa11.08□□□□□ -0.64
IGHV3-54-201ENST00000622166 SAFBQ15424 915 aaKnown RBP eCLIP11.08□□□□□ -0.64
IGHV3-54-201ENST00000622166 RTN1Q16799 776 aa11.08□□□□□ -0.64
IGHV3-54-201ENST00000622166 CCDC152Q4G0S7 254 aa11.08□□□□□ -0.64
IGHV3-54-201ENST00000622166 PPP4R3BQ5MIZ7 849 aa11.08□□□□□ -0.64
IGHV3-54-201ENST00000622166 METTL16Q86W50 562 aaKnown RBP11.08□□□□□ -0.64
IGHV3-54-201ENST00000622166 KRI1Q8N9T8 703 aaKnown RBP11.08□□□□□ -0.64
IGHV3-54-201ENST00000622166 ZNF579Q8NAF0 562 aaKnown RBP11.08□□□□□ -0.64
IGHV3-54-201ENST00000622166 FBXW7Q969H0 707 aa11.08□□□□□ -0.64
IGHV3-54-201ENST00000622166 MPHOSPH8Q99549 860 aa11.08□□□□□ -0.64
IGHV3-54-201ENST00000622166 RNF41Q9H4P4 317 aaPredicted RBP11.08□□□□□ -0.64
IGHV3-54-201ENST00000622166 INCENPQ9NQS7 918 aa11.08□□□□□ -0.64
IGHV3-54-201ENST00000622166 CGNQ9P2M7 1197 aaKnown RBP11.08□□□□□ -0.64
IGHV3-54-201ENST00000622166 MYH6P13533 1939 aa11.07□□□□□ -0.64
IGHV3-54-201ENST00000622166 AHDC1Q5TGY3 1603 aaPredicted RBP11.07□□□□□ -0.64
IGHV3-54-201ENST00000622166 CCDC196A0A1B0GTZ2 297 aa11.07□□□□□ -0.64
IGHV3-54-201ENST00000622166 PRKAB2O43741 272 aa11.07□□□□□ -0.64
IGHV3-54-201ENST00000622166 NRDCO43847 1150 aa11.07□□□□□ -0.64
IGHV3-54-201ENST00000622166 DEXIO95424 95 aa11.07□□□□□ -0.64
IGHV3-54-201ENST00000622166 NTSR2O95665 410 aa11.07□□□□□ -0.64
IGHV3-54-201ENST00000622166 SFPQP23246 707 aaKnown RBP eCLIP11.07□□□□□ -0.64
IGHV3-54-201ENST00000622166 IGHMBP2P38935 993 aaKnown RBP11.07□□□□□ -0.64
IGHV3-54-201ENST00000622166 TOB1P50616 345 aaPredicted RBP11.07□□□□□ -0.64
IGHV3-54-201ENST00000622166 WTAPQ15007 396 aa11.07□□□□□ -0.64
IGHV3-54-201ENST00000622166 SART3Q15020 963 aaKnown RBP11.07□□□□□ -0.64
IGHV3-54-201ENST00000622166 RILPL1Q5EBL4 403 aa11.07□□□□□ -0.64
IGHV3-54-201ENST00000622166 E4F1Q66K89 784 aaPredicted RBP11.07□□□□□ -0.64
IGHV3-54-201ENST00000622166 OLFM4Q6UX06 510 aa11.07□□□□□ -0.64
IGHV3-54-201ENST00000622166 TRIM22Q8IYM9 498 aa11.07□□□□□ -0.64
IGHV3-54-201ENST00000622166 STK11IPQ8N1F8 1099 aa11.07□□□□□ -0.64
IGHV3-54-201ENST00000622166 LCORLQ8N3X6 602 aa11.07□□□□□ -0.64
IGHV3-54-201ENST00000622166 CRACR2BQ8N4Y2 399 aaPredicted RBP11.07□□□□□ -0.64
IGHV3-54-201ENST00000622166 KIF18AQ8NI77 898 aa11.07□□□□□ -0.64
IGHV3-54-201ENST00000622166 ERO1AQ96HE7 468 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms