RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 PIDD1Q9HB75 910 aa8.07□□□□□ -1.12
BRCA1-229ENST00000621897 GRIK1P39086 918 aa8.06□□□□□ -1.12
BRCA1-229ENST00000621897 LLGL2Q6P1M3 1020 aa8.06□□□□□ -1.12
BRCA1-229ENST00000621897 INTS5Q6P9B9 1019 aaKnown RBP8.06□□□□□ -1.12
BRCA1-229ENST00000621897 ZNF765Q7L2R6 523 aa8.06□□□□□ -1.12
BRCA1-229ENST00000621897 GIMAP7Q8NHV1 300 aa8.06□□□□□ -1.12
BRCA1-229ENST00000621897 FAM161BQ96MY7 647 aa8.06□□□□□ -1.12
BRCA1-229ENST00000621897 LEMD3Q9Y2U8 911 aa8.06□□□□□ -1.12
BRCA1-229ENST00000621897 CSADQ9Y600 493 aa8.06□□□□□ -1.12
BRCA1-229ENST00000621897 TRIM37O94972 964 aa8.05□□□□□ -1.12
BRCA1-229ENST00000621897 CDK5R2Q13319 367 aa8.05□□□□□ -1.12
BRCA1-229ENST00000621897 CCDC27Q2M243 656 aa8.05□□□□□ -1.12
BRCA1-229ENST00000621897 SMYD4Q8IYR2 804 aaPredicted RBP8.05□□□□□ -1.12
BRCA1-229ENST00000621897 SAMM50Q9Y512 469 aa8.05□□□□□ -1.12
BRCA1-229ENST00000621897 DCDC2CA8MYV0 355 aa8.04□□□□□ -1.12
BRCA1-229ENST00000621897 RNGTTO60942 597 aaKnown RBP8.04□□□□□ -1.12
BRCA1-229ENST00000621897 ERVK-24P63145 666 aa8.04□□□□□ -1.12
BRCA1-229ENST00000621897 HNRNPUQ00839 825 aaKnown RBP eCLIP8.04□□□□□ -1.12
BRCA1-229ENST00000621897 PTPN11Q06124 597 aaPredicted RBP8.04□□□□□ -1.12
BRCA1-229ENST00000621897 MSMPQ1L6U9 139 aa8.04□□□□□ -1.12
BRCA1-229ENST00000621897 PPM1JQ5JR12 505 aa8.04□□□□□ -1.12
BRCA1-229ENST00000621897 MEI1Q5TIA1 1274 aa8.04□□□□□ -1.12
BRCA1-229ENST00000621897 SV2BQ7L1I2 683 aa8.04□□□□□ -1.12
BRCA1-229ENST00000621897 DTX1Q86Y01 620 aa8.04□□□□□ -1.12
BRCA1-229ENST00000621897 ISL2Q96A47 359 aa8.04□□□□□ -1.12
BRCA1-229ENST00000621897 METTL22Q9BUU2 404 aaPredicted RBP8.04□□□□□ -1.12
BRCA1-229ENST00000621897 CTSHP09668 335 aa8.03□□□□□ -1.12
BRCA1-229ENST00000621897 FOSL1P15407 271 aa8.03□□□□□ -1.12
BRCA1-229ENST00000621897 NTF4P34130 210 aa8.03□□□□□ -1.12
BRCA1-229ENST00000621897 DAB2P98082 770 aa8.03□□□□□ -1.12
BRCA1-229ENST00000621897 FGD1P98174 961 aa8.03□□□□□ -1.12
BRCA1-229ENST00000621897 LRRC14Q15048 493 aa8.03□□□□□ -1.12
BRCA1-229ENST00000621897 CPSF6Q16630 551 aaKnown RBP eCLIP8.03□□□□□ -1.12
BRCA1-229ENST00000621897 UBE3DQ7Z6J8 389 aa8.03□□□□□ -1.12
BRCA1-229ENST00000621897 RNF214Q8ND24 703 aa8.03□□□□□ -1.12
BRCA1-229ENST00000621897 GAL3ST3Q96A11 431 aa8.03□□□□□ -1.12
BRCA1-229ENST00000621897 PSMD2Q13200 908 aa8.02□□□□□ -1.13
BRCA1-229ENST00000621897 CCDC85BQ15834 202 aaPredicted RBP8.02□□□□□ -1.13
BRCA1-229ENST00000621897 C12orf40Q86WS4 652 aa8.02□□□□□ -1.13
BRCA1-229ENST00000621897 PCDHA4Q9UN74 947 aa8.02□□□□□ -1.13
BRCA1-229ENST00000621897 CYP8B1Q9UNU6 501 aa8.02□□□□□ -1.13
BRCA1-229ENST00000621897 CYP26A1O43174 497 aa8.01□□□□□ -1.13
BRCA1-229ENST00000621897 RING1Q06587 406 aa8.01□□□□□ -1.13
BRCA1-229ENST00000621897 TTBK2Q6IQ55 1244 aa8.01□□□□□ -1.13
BRCA1-229ENST00000621897 OGFOD3Q6PK18 319 aa8.01□□□□□ -1.13
BRCA1-229ENST00000621897 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.01□□□□□ -1.13
BRCA1-229ENST00000621897 PCOLCE2Q9UKZ9 415 aa8.01□□□□□ -1.13
BRCA1-229ENST00000621897 FAM87AP0C7U9 286 aa8□□□□□ -1.13
BRCA1-229ENST00000621897 CDK8P49336 464 aa8□□□□□ -1.13
BRCA1-229ENST00000621897 XPCQ01831 940 aaPredicted RBP8□□□□□ -1.13
BRCA1-229ENST00000621897 INPP5AQ14642 412 aa8□□□□□ -1.13
BRCA1-229ENST00000621897 MAP3K11Q16584 847 aa8□□□□□ -1.13
BRCA1-229ENST00000621897 DUSP27Q5VZP5 1158 aa8□□□□□ -1.13
BRCA1-229ENST00000621897 TMC4Q7Z404 712 aa8□□□□□ -1.13
BRCA1-229ENST00000621897 LRRC4CQ9HCJ2 640 aa8□□□□□ -1.13
BRCA1-229ENST00000621897 LEFTY1O75610 366 aa7.99□□□□□ -1.13
BRCA1-229ENST00000621897 CYP27A1Q02318 531 aa7.99□□□□□ -1.13
BRCA1-229ENST00000621897 LRFN4Q6PJG9 635 aa7.99□□□□□ -1.13
BRCA1-229ENST00000621897 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.99□□□□□ -1.13
BRCA1-229ENST00000621897 PSMG3-AS1Q96PY0 264 aa7.99□□□□□ -1.13
BRCA1-229ENST00000621897 ZC3H7BQ9UGR2 993 aaKnown RBP7.99□□□□□ -1.13
BRCA1-229ENST00000621897 PCDHB5Q9Y5E4 795 aa7.99□□□□□ -1.13
BRCA1-229ENST00000621897 U3KQE9 123 aa7.99□□□□□ -1.13
BRCA1-229ENST00000621897 LIG3P49916 1009 aa7.98□□□□□ -1.13
BRCA1-229ENST00000621897 GP2P55259 537 aaKnown RBP7.98□□□□□ -1.13
BRCA1-229ENST00000621897 SEPT6Q14141 434 aa7.98□□□□□ -1.13
BRCA1-229ENST00000621897 ZBTB37Q5TC79 503 aa7.98□□□□□ -1.13
BRCA1-229ENST00000621897 SCARA3Q6AZY7 606 aa7.98□□□□□ -1.13
BRCA1-229ENST00000621897 NFXL1Q6ZNB6 911 aa7.98□□□□□ -1.13
BRCA1-229ENST00000621897 PLPPR2Q96GM1 343 aa7.98□□□□□ -1.13
BRCA1-229ENST00000621897 SSU72Q9NP77 194 aaKnown RBP7.98□□□□□ -1.13
BRCA1-229ENST00000621897 OAS3Q9Y6K5 1087 aaKnown RBP7.98□□□□□ -1.13
BRCA1-229ENST00000621897 ELMO3Q96BJ8 720 aa7.97□□□□□ -1.13
BRCA1-229ENST00000621897 DUSP23Q9BVJ7 150 aa7.97□□□□□ -1.13
BRCA1-229ENST00000621897 PICK1Q9NRD5 415 aa7.97□□□□□ -1.13
BRCA1-229ENST00000621897 ERCC3P19447 782 aa7.96□□□□□ -1.14
BRCA1-229ENST00000621897 RPS26P62854 115 aaKnown RBP7.96□□□□□ -1.14
BRCA1-229ENST00000621897 TAF1CQ15572 869 aaPredicted RBP7.96□□□□□ -1.14
BRCA1-229ENST00000621897 AGMOQ6ZNB7 445 aa7.96□□□□□ -1.14
BRCA1-229ENST00000621897 TOP6BLQ8N6T0 577 aa7.96□□□□□ -1.14
BRCA1-229ENST00000621897 FAM181AQ8N9Y4 354 aa7.96□□□□□ -1.14
BRCA1-229ENST00000621897 CCDC39Q9UFE4 941 aa7.96□□□□□ -1.14
BRCA1-229ENST00000621897 PRAMEF27A3QJZ7 478 aa7.95□□□□□ -1.14
BRCA1-229ENST00000621897 FANCGO15287 622 aa7.95□□□□□ -1.14
BRCA1-229ENST00000621897 WNT11O96014 354 aa7.95□□□□□ -1.14
BRCA1-229ENST00000621897 PRNPP04156 253 aa7.95□□□□□ -1.14
BRCA1-229ENST00000621897 TFE3P19532 575 aaPredicted RBP7.95□□□□□ -1.14
BRCA1-229ENST00000621897 CYP27C1Q4G0S4 372 aa7.95□□□□□ -1.14
BRCA1-229ENST00000621897 WIPI1Q5MNZ9 446 aaPredicted RBP7.95□□□□□ -1.14
BRCA1-229ENST00000621897 CYFIP1Q7L576 1253 aa7.95□□□□□ -1.14
BRCA1-229ENST00000621897 FBRSQ9HAH7 460 aa7.95□□□□□ -1.14
BRCA1-229ENST00000621897 TLR6Q9Y2C9 796 aa7.95□□□□□ -1.14
BRCA1-229ENST00000621897 USP31Q70CQ4 1352 aa7.95□□□□□ -1.14
BRCA1-229ENST00000621897 F6X3S4 739 aa7.94□□□□□ -1.14
BRCA1-229ENST00000621897 SORBS3O60504 671 aa7.94□□□□□ -1.14
BRCA1-229ENST00000621897 ST13P50502 369 aaKnown RBP7.94□□□□□ -1.14
BRCA1-229ENST00000621897 CRELD1Q96HD1 420 aa7.94□□□□□ -1.14
BRCA1-229ENST00000621897 HDXQ7Z353 690 aa7.93□□□□□ -1.14
BRCA1-229ENST00000621897 NOC4LQ9BVI4 516 aaKnown RBP7.93□□□□□ -1.14
BRCA1-229ENST00000621897 BSDC1Q9NW68 430 aaPredicted RBP7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms