RNA–Protein interactions for RNA: ENST00000621757.1

COL8A1-208, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-208ENST00000621757 GPATCH3Q96I76 525 aa14.63□□□□□ -0.07
COL8A1-208ENST00000621757 HAUS7Q99871 368 aa14.63□□□□□ -0.07
COL8A1-208ENST00000621757 ECHDC1Q9NTX5 307 aa14.63□□□□□ -0.07
COL8A1-208ENST00000621757 PAG1Q9NWQ8 432 aa14.63□□□□□ -0.07
COL8A1-208ENST00000621757 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.63□□□□□ -0.07
COL8A1-208ENST00000621757 COL2A1P02458 1487 aaPredicted RBP14.63□□□□□ -0.07
COL8A1-208ENST00000621757 BAG3O95817 575 aa14.62□□□□□ -0.07
COL8A1-208ENST00000621757 MAP4K4O95819 1239 aaPredicted RBP14.62□□□□□ -0.07
COL8A1-208ENST00000621757 PDE6AP16499 860 aa14.62□□□□□ -0.07
COL8A1-208ENST00000621757 KIF23Q02241 960 aaPredicted RBP14.62□□□□□ -0.07
COL8A1-208ENST00000621757 MKRN3Q13064 507 aaKnown RBP14.62□□□□□ -0.07
COL8A1-208ENST00000621757 DCAF15Q66K64 600 aa14.62□□□□□ -0.07
COL8A1-208ENST00000621757 SH3BP5LQ7L8J4 393 aa14.62□□□□□ -0.07
COL8A1-208ENST00000621757 ANKRD13AQ8IZ07 590 aa14.62□□□□□ -0.07
COL8A1-208ENST00000621757 MIGA1Q8NAN2 632 aa14.62□□□□□ -0.07
COL8A1-208ENST00000621757 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.62□□□□□ -0.07
COL8A1-208ENST00000621757 OTUD7AQ8TE49 926 aaPredicted RBP14.62□□□□□ -0.07
COL8A1-208ENST00000621757 CSRNP1Q96S65 589 aa14.62□□□□□ -0.07
COL8A1-208ENST00000621757 DDTLA6NHG4 134 aaPredicted RBP14.61□□□□□ -0.07
COL8A1-208ENST00000621757 UNCXA6NJT0 531 aa14.61□□□□□ -0.07
COL8A1-208ENST00000621757 PLCG2P16885 1265 aa14.61□□□□□ -0.07
COL8A1-208ENST00000621757 PPP4CP60510 307 aa14.61□□□□□ -0.07
COL8A1-208ENST00000621757 DYNLL1P63167 89 aaKnown RBP14.61□□□□□ -0.07
COL8A1-208ENST00000621757 VGLL4Q14135 290 aa14.61□□□□□ -0.07
COL8A1-208ENST00000621757 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.61□□□□□ -0.07
COL8A1-208ENST00000621757 MIGA2Q7L4E1 593 aa14.61□□□□□ -0.07
COL8A1-208ENST00000621757 ZSCAN29Q8IWY8 852 aaPredicted RBP14.61□□□□□ -0.07
COL8A1-208ENST00000621757 WRNIP1Q96S55 665 aa14.61□□□□□ -0.07
COL8A1-208ENST00000621757 BEGAINQ9BUH8 593 aa14.61□□□□□ -0.07
COL8A1-208ENST00000621757 OSBPL5Q9H0X9 879 aaPredicted RBP14.61□□□□□ -0.07
COL8A1-208ENST00000621757 SIPA1L1O43166 1804 aa14.61□□□□□ -0.07
COL8A1-208ENST00000621757 DDX60LQ5H9U9 1706 aaKnown RBP14.61□□□□□ -0.07
COL8A1-208ENST00000621757 NPM3O75607 178 aaKnown RBP14.6□□□□□ -0.07
COL8A1-208ENST00000621757 IGHDP01880 384 aa14.6□□□□□ -0.07
COL8A1-208ENST00000621757 SLC9C2Q5TAH2 1124 aa14.6□□□□□ -0.07
COL8A1-208ENST00000621757 ANKRD45Q5TZF3 282 aa14.6□□□□□ -0.07
COL8A1-208ENST00000621757 SPRYD7Q5W111 196 aa14.6□□□□□ -0.07
COL8A1-208ENST00000621757 TMED8Q6PL24 325 aaPredicted RBP14.6□□□□□ -0.07
COL8A1-208ENST00000621757 SLC10A4Q96EP9 437 aa14.6□□□□□ -0.07
COL8A1-208ENST00000621757 WNK4Q96J92 1243 aa14.6□□□□□ -0.07
COL8A1-208ENST00000621757 ZNF341Q9BYN7 854 aa14.6□□□□□ -0.07
COL8A1-208ENST00000621757 RWDD1Q9H446 243 aaPredicted RBP14.6□□□□□ -0.07
COL8A1-208ENST00000621757 ELP3Q9H9T3 547 aa14.6□□□□□ -0.07
COL8A1-208ENST00000621757 NAV1Q8NEY1 1877 aa14.6□□□□□ -0.07
COL8A1-208ENST00000621757 FLT1P17948 1338 aa14.6□□□□□ -0.07
COL8A1-208ENST00000621757 TTC41PQ6P2S7 1318 aa14.6□□□□□ -0.07
COL8A1-208ENST00000621757 SALL3Q9BXA9 1300 aa14.6□□□□□ -0.07
COL8A1-208ENST00000621757 ZNF532Q9HCE3 1301 aa14.6□□□□□ -0.07
COL8A1-208ENST00000621757 TCRBV5S4A2TA0A5A2 114 aa14.59□□□□□ -0.07
COL8A1-208ENST00000621757 MX1P20591 662 aa14.59□□□□□ -0.07
COL8A1-208ENST00000621757 MAP3K9P80192 1104 aa14.59□□□□□ -0.07
COL8A1-208ENST00000621757 MAPKAPK5Q8IW41 473 aa14.59□□□□□ -0.07
COL8A1-208ENST00000621757 SMC5Q8IY18 1101 aa14.59□□□□□ -0.07
COL8A1-208ENST00000621757 TGFBRAP1Q8WUH2 860 aa14.59□□□□□ -0.07
COL8A1-208ENST00000621757 ZBTB47Q9UFB7 747 aaPredicted RBP14.59□□□□□ -0.07
COL8A1-208ENST00000621757 CSADQ9Y600 493 aa14.59□□□□□ -0.07
COL8A1-208ENST00000621757 CHGBP05060 677 aa14.58□□□□□ -0.08
COL8A1-208ENST00000621757 SLURP2P0DP57 97 aa14.58□□□□□ -0.08
COL8A1-208ENST00000621757 ZBTB48P10074 688 aaPredicted RBP14.58□□□□□ -0.08
COL8A1-208ENST00000621757 INPP5BP32019 993 aa14.58□□□□□ -0.08
COL8A1-208ENST00000621757 GJA5P36382 358 aa14.58□□□□□ -0.08
COL8A1-208ENST00000621757 SLFNL1Q499Z3 407 aa14.58□□□□□ -0.08
COL8A1-208ENST00000621757 PI4K2BQ8TCG2 481 aa14.58□□□□□ -0.08
COL8A1-208ENST00000621757 CNKSR2Q8WXI2 1034 aa14.58□□□□□ -0.08
COL8A1-208ENST00000621757 ZKSCAN4Q969J2 545 aaPredicted RBP14.58□□□□□ -0.08
COL8A1-208ENST00000621757 OPTNQ96CV9 577 aa14.58□□□□□ -0.08
COL8A1-208ENST00000621757 RIOK1Q9BRS2 568 aaKnown RBP14.58□□□□□ -0.08
COL8A1-208ENST00000621757 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.58□□□□□ -0.08
COL8A1-208ENST00000621757 SNCAIPQ9Y6H5 919 aa14.58□□□□□ -0.08
COL8A1-208ENST00000621757 DOCK1Q14185 1865 aa14.58□□□□□ -0.08
COL8A1-208ENST00000621757 MYH1P12882 1939 aa14.58□□□□□ -0.08
COL8A1-208ENST00000621757 MAGEB6P1A0A0J9YX57 407 aa14.57□□□□□ -0.08
COL8A1-208ENST00000621757 ERC2O15083 957 aa14.57□□□□□ -0.08
COL8A1-208ENST00000621757 ADD2P35612 726 aa14.57□□□□□ -0.08
COL8A1-208ENST00000621757 B4GALNT3Q6L9W6 998 aa14.57□□□□□ -0.08
COL8A1-208ENST00000621757 CERS3Q8IU89 383 aa14.57□□□□□ -0.08
COL8A1-208ENST00000621757 LNPKQ9C0E8 428 aa14.57□□□□□ -0.08
COL8A1-208ENST00000621757 ZNF112Q9UJU3 913 aa14.57□□□□□ -0.08
COL8A1-208ENST00000621757 SPDYE5A6NIY4 337 aa14.56□□□□□ -0.08
COL8A1-208ENST00000621757 FAM196BA6NMK8 535 aa14.56□□□□□ -0.08
COL8A1-208ENST00000621757 REM2Q8IYK8 340 aaPredicted RBP14.56□□□□□ -0.08
COL8A1-208ENST00000621757 OTUD5Q96G74 571 aa14.56□□□□□ -0.08
COL8A1-208ENST00000621757 ATAD5Q96QE3 1844 aa14.55□□□□□ -0.08
COL8A1-208ENST00000621757 CCDC85CA6NKD9 419 aa14.55□□□□□ -0.08
COL8A1-208ENST00000621757 PHF20L1A8MW92 1017 aa14.55□□□□□ -0.08
COL8A1-208ENST00000621757 CA12O43570 354 aa14.55□□□□□ -0.08
COL8A1-208ENST00000621757 GLRX3O76003 335 aaKnown RBP14.55□□□□□ -0.08
COL8A1-208ENST00000621757 USP5P45974 858 aa14.55□□□□□ -0.08
COL8A1-208ENST00000621757 MAP3K10Q02779 954 aa14.55□□□□□ -0.08
COL8A1-208ENST00000621757 SREBF2Q12772 1141 aa14.55□□□□□ -0.08
COL8A1-208ENST00000621757 SLC4A8Q2Y0W8 1093 aa14.55□□□□□ -0.08
COL8A1-208ENST00000621757 NOL9Q5SY16 702 aaKnown RBP14.55□□□□□ -0.08
COL8A1-208ENST00000621757 LCORLQ8N3X6 602 aa14.55□□□□□ -0.08
COL8A1-208ENST00000621757 KBTBD3Q8NAB2 608 aa14.55□□□□□ -0.08
COL8A1-208ENST00000621757 SAP30BPQ9UHR5 308 aaKnown RBP14.55□□□□□ -0.08
COL8A1-208ENST00000621757 MANSC4A6NHS7 340 aaPredicted RBP14.54□□□□□ -0.08
COL8A1-208ENST00000621757 MBD4O95243 580 aa14.54□□□□□ -0.08
COL8A1-208ENST00000621757 NUCB1Q02818 461 aa14.54□□□□□ -0.08
COL8A1-208ENST00000621757 UBE3CQ15386 1083 aa14.54□□□□□ -0.08
COL8A1-208ENST00000621757 ZSCAN25Q6NSZ9 544 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 100.9 ms