RNA–Protein interactions for RNA: ENST00000621266.4

COL4A6-210, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,627 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-210ENST00000621266 BAG2O95816 211 aa11.07□□□□□ -0.64
COL4A6-210ENST00000621266 VPS41P49754 854 aa11.07□□□□□ -0.64
COL4A6-210ENST00000621266 SLF2Q8IX21 1173 aa11.07□□□□□ -0.64
COL4A6-210ENST00000621266 ARHGAP24Q8N264 748 aa11.07□□□□□ -0.64
COL4A6-210ENST00000621266 CCDC24Q8N4L8 307 aa11.07□□□□□ -0.64
COL4A6-210ENST00000621266 STAG1Q8WVM7 1258 aa11.07□□□□□ -0.64
COL4A6-210ENST00000621266 BEGAINQ9BUH8 593 aa11.07□□□□□ -0.64
COL4A6-210ENST00000621266 SDSP20132 328 aa11.07□□□□□ -0.64
COL4A6-210ENST00000621266 C8orf34Q49A92 452 aa11.07□□□□□ -0.64
COL4A6-210ENST00000621266 JAKMIP2Q96AA8 810 aa11.07□□□□□ -0.64
COL4A6-210ENST00000621266 PI4KAP2A4QPH2 592 aa11.07□□□□□ -0.64
COL4A6-210ENST00000621266 CRCPO75575 148 aa11.07□□□□□ -0.64
COL4A6-210ENST00000621266 PRKG1Q13976 671 aa11.07□□□□□ -0.64
COL4A6-210ENST00000621266 Q6ZUG5 572 aa11.07□□□□□ -0.64
COL4A6-210ENST00000621266 IFT20Q8IY31 132 aa11.07□□□□□ -0.64
COL4A6-210ENST00000621266 PI4KAP1Q8N8J0 262 aa11.07□□□□□ -0.64
COL4A6-210ENST00000621266 MTUS1Q9ULD2 1270 aa11.07□□□□□ -0.64
COL4A6-210ENST00000621266 SPTLC2O15270 562 aa11.07□□□□□ -0.64
COL4A6-210ENST00000621266 DMTNQ08495 405 aa11.07□□□□□ -0.64
COL4A6-210ENST00000621266 ZBTB17Q13105 803 aa11.07□□□□□ -0.64
COL4A6-210ENST00000621266 CCDC152Q4G0S7 254 aa11.07□□□□□ -0.64
COL4A6-210ENST00000621266 DZIP3Q86Y13 1208 aaKnown RBP11.07□□□□□ -0.64
COL4A6-210ENST00000621266 KIAA1524Q8TCG1 905 aa11.07□□□□□ -0.64
COL4A6-210ENST00000621266 SNCBQ16143 134 aa11.06□□□□□ -0.64
COL4A6-210ENST00000621266 ORAI2Q96SN7 254 aa11.06□□□□□ -0.64
COL4A6-210ENST00000621266 ECHDC1Q9NTX5 307 aa11.06□□□□□ -0.64
COL4A6-210ENST00000621266 ASXL1Q8IXJ9 1541 aa11.06□□□□□ -0.64
COL4A6-210ENST00000621266 OGFOD1Q8N543 542 aa11.06□□□□□ -0.64
COL4A6-210ENST00000621266 SNX21Q969T3 373 aa11.06□□□□□ -0.64
COL4A6-210ENST00000621266 A6NNZ2 444 aa11.06□□□□□ -0.64
COL4A6-210ENST00000621266 MGEA5O60502 916 aa11.06□□□□□ -0.64
COL4A6-210ENST00000621266 TUBB8Q3ZCM7 444 aa11.06□□□□□ -0.64
COL4A6-210ENST00000621266 SND1Q7KZF4 910 aaKnown RBP eCLIP11.06□□□□□ -0.64
COL4A6-210ENST00000621266 TAOK1Q7L7X3 1001 aa11.06□□□□□ -0.64
COL4A6-210ENST00000621266 CNGA4Q8IV77 575 aa11.06□□□□□ -0.64
COL4A6-210ENST00000621266 KAT14Q9H8E8 782 aa11.06□□□□□ -0.64
COL4A6-210ENST00000621266 LRRD1A4D1F6 860 aa11.06□□□□□ -0.64
COL4A6-210ENST00000621266 RXRBP28702 533 aa11.06□□□□□ -0.64
COL4A6-210ENST00000621266 HHATQ5VTY9 493 aa11.06□□□□□ -0.64
COL4A6-210ENST00000621266 RAB3IPQ96QF0 476 aaPredicted RBP11.06□□□□□ -0.64
COL4A6-210ENST00000621266 PSMB7Q99436 277 aa11.06□□□□□ -0.64
COL4A6-210ENST00000621266 HMG20BQ9P0W2 317 aa11.06□□□□□ -0.64
COL4A6-210ENST00000621266 MX2P20592 715 aa11.05□□□□□ -0.64
COL4A6-210ENST00000621266 RAPGEF1Q13905 1077 aa11.05□□□□□ -0.64
COL4A6-210ENST00000621266 MFSD6Q6ZSS7 791 aa11.05□□□□□ -0.64
COL4A6-210ENST00000621266 KLHL7Q8IXQ5 586 aa11.05□□□□□ -0.64
COL4A6-210ENST00000621266 GPR161Q8N6U8 529 aaKnown RBP11.05□□□□□ -0.64
COL4A6-210ENST00000621266 CCT6BQ92526 530 aa11.05□□□□□ -0.64
COL4A6-210ENST00000621266 EHMT1Q9H9B1 1298 aa11.05□□□□□ -0.64
COL4A6-210ENST00000621266 SNRKQ9NRH2 765 aa11.05□□□□□ -0.64
COL4A6-210ENST00000621266 MRFAP1Q9Y605 127 aa11.05□□□□□ -0.64
COL4A6-210ENST00000621266 NUCB1Q02818 461 aa11.05□□□□□ -0.64
COL4A6-210ENST00000621266 TMED1Q13445 227 aa11.05□□□□□ -0.64
COL4A6-210ENST00000621266 INF2Q27J81 1249 aa11.05□□□□□ -0.64
COL4A6-210ENST00000621266 LDHAL6AQ6ZMR3 332 aa11.05□□□□□ -0.64
COL4A6-210ENST00000621266 UBE3BQ7Z3V4 1068 aa11.05□□□□□ -0.64
COL4A6-210ENST00000621266 CTNND2Q9UQB3 1225 aa11.05□□□□□ -0.64
COL4A6-210ENST00000621266 TCOF1Q13428 1488 aaKnown RBP11.05□□□□□ -0.64
COL4A6-210ENST00000621266 CLTAP09496 248 aa11.05□□□□□ -0.64
COL4A6-210ENST00000621266 SNX16P57768 344 aa11.05□□□□□ -0.64
COL4A6-210ENST00000621266 ARHGAP45Q92619 1136 aa11.05□□□□□ -0.64
COL4A6-210ENST00000621266 HIP1RO75146 1068 aa11.05□□□□□ -0.64
COL4A6-210ENST00000621266 TTC19Q6DKK2 380 aaPredicted RBP11.05□□□□□ -0.64
COL4A6-210ENST00000621266 AKNAD1Q5T1N1 836 aa11.05□□□□□ -0.64
COL4A6-210ENST00000621266 ANKRD42Q8N9B4 389 aa11.05□□□□□ -0.64
COL4A6-210ENST00000621266 CABP5Q9NP86 173 aa11.05□□□□□ -0.64
COL4A6-210ENST00000621266 SLC8A1P32418 973 aa11.04□□□□□ -0.64
COL4A6-210ENST00000621266 RASA3Q14644 834 aa11.04□□□□□ -0.64
COL4A6-210ENST00000621266 RUFY4Q6ZNE9 571 aa11.04□□□□□ -0.64
COL4A6-210ENST00000621266 NFATC2IPQ8NCF5 419 aa11.04□□□□□ -0.64
COL4A6-210ENST00000621266 LEO1Q8WVC0 666 aaPredicted RBP11.04□□□□□ -0.64
COL4A6-210ENST00000621266 PLIN2Q99541 437 aa11.04□□□□□ -0.64
COL4A6-210ENST00000621266 ATP1A2P50993 1020 aa11.04□□□□□ -0.64
COL4A6-210ENST00000621266 ANKRD13DQ6ZTN6 518 aa11.04□□□□□ -0.64
COL4A6-210ENST00000621266 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.04□□□□□ -0.64
COL4A6-210ENST00000621266 IGSF22Q8N9C0 903 aa11.04□□□□□ -0.64
COL4A6-210ENST00000621266 NPATQ14207 1427 aa11.04□□□□□ -0.64
COL4A6-210ENST00000621266 PPFIA1Q13136 1202 aa11.04□□□□□ -0.64
COL4A6-210ENST00000621266 WDR62O43379 1518 aa11.04□□□□□ -0.64
COL4A6-210ENST00000621266 TSPY2A6NKD2 308 aa11.04□□□□□ -0.64
COL4A6-210ENST00000621266 E2F5Q15329 346 aa11.04□□□□□ -0.64
COL4A6-210ENST00000621266 ARHGAP27Q6ZUM4 889 aa11.04□□□□□ -0.64
COL4A6-210ENST00000621266 NAA16Q6N069 864 aaPredicted RBP11.04□□□□□ -0.64
COL4A6-210ENST00000621266 GPIHBP1Q8IV16 184 aa11.04□□□□□ -0.64
COL4A6-210ENST00000621266 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.04□□□□□ -0.64
COL4A6-210ENST00000621266 NLRP3Q96P20 1036 aa11.04□□□□□ -0.64
COL4A6-210ENST00000621266 SLAIN2Q9P270 581 aa11.04□□□□□ -0.64
COL4A6-210ENST00000621266 FAM13AO94988 1023 aa11.04□□□□□ -0.64
COL4A6-210ENST00000621266 KSR1Q8IVT5 923 aa11.04□□□□□ -0.64
COL4A6-210ENST00000621266 RBM17Q96I25 401 aaKnown RBP11.04□□□□□ -0.64
COL4A6-210ENST00000621266 NUCKS1Q9H1E3 243 aaKnown RBP11.04□□□□□ -0.64
COL4A6-210ENST00000621266 ARHGAP42A6NI28 874 aa11.03□□□□□ -0.64
COL4A6-210ENST00000621266 RASEFQ8IZ41 740 aa11.03□□□□□ -0.64
COL4A6-210ENST00000621266 VPS16Q9H269 839 aa11.03□□□□□ -0.64
COL4A6-210ENST00000621266 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.03□□□□□ -0.64
COL4A6-210ENST00000621266 LUC7L3O95232 432 aaKnown RBP11.03□□□□□ -0.64
COL4A6-210ENST00000621266 TRPC3Q13507 836 aa11.03□□□□□ -0.64
COL4A6-210ENST00000621266 E2F4Q16254 413 aa11.03□□□□□ -0.64
COL4A6-210ENST00000621266 LRRC23Q53EV4 343 aaPredicted RBP11.03□□□□□ -0.64
COL4A6-210ENST00000621266 AKAP4Q5JQC9 854 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms