RNA–Protein interactions for RNA: ENST00000621040.4

GTF2I-219, Transcript of general transcription factor IIi, humanhuman

TSL 2

Gene GTF2I, Length 3,437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2I-219ENST00000621040 ENTPD3O75355 529 aa10.4□□□□□ -0.74
GTF2I-219ENST00000621040 VEGFBP49765 207 aa10.4□□□□□ -0.74
GTF2I-219ENST00000621040 HTRA3P83110 453 aa10.4□□□□□ -0.74
GTF2I-219ENST00000621040 SLC20A2Q08357 652 aa10.4□□□□□ -0.74
GTF2I-219ENST00000621040 RASAL3Q86YV0 1011 aa10.4□□□□□ -0.74
GTF2I-219ENST00000621040 DEFB129Q9H1M3 183 aa10.4□□□□□ -0.74
GTF2I-219ENST00000621040 GBA2Q9HCG7 927 aaPredicted RBP10.4□□□□□ -0.74
GTF2I-219ENST00000621040 TESPA1A2RU30 521 aaPredicted RBP10.4□□□□□ -0.75
GTF2I-219ENST00000621040 CELF2O95319 508 aaKnown RBP10.4□□□□□ -0.75
GTF2I-219ENST00000621040 DDIT3P35638 169 aa10.4□□□□□ -0.75
GTF2I-219ENST00000621040 NOL9Q5SY16 702 aaKnown RBP10.4□□□□□ -0.75
GTF2I-219ENST00000621040 SH3BP5LQ7L8J4 393 aa10.4□□□□□ -0.75
GTF2I-219ENST00000621040 VPS37DQ86XT2 251 aa10.4□□□□□ -0.75
GTF2I-219ENST00000621040 PI4K2BQ8TCG2 481 aa10.4□□□□□ -0.75
GTF2I-219ENST00000621040 RNF216Q9NWF9 866 aaPredicted RBP10.4□□□□□ -0.75
GTF2I-219ENST00000621040 SULF1Q8IWU6 871 aa10.39□□□□□ -0.75
GTF2I-219ENST00000621040 LRRCC1Q9C099 1032 aa10.39□□□□□ -0.75
GTF2I-219ENST00000621040 GRPEL1Q9HAV7 217 aa10.39□□□□□ -0.75
GTF2I-219ENST00000621040 WDR33Q9C0J8 1336 aaKnown RBP10.39□□□□□ -0.75
GTF2I-219ENST00000621040 DYNC1I1O14576 645 aa10.39□□□□□ -0.75
GTF2I-219ENST00000621040 TBC1D12O60347 775 aa10.39□□□□□ -0.75
GTF2I-219ENST00000621040 USP2O75604 605 aaPredicted RBP10.39□□□□□ -0.75
GTF2I-219ENST00000621040 ZAP70P43403 619 aa10.39□□□□□ -0.75
GTF2I-219ENST00000621040 FAM151AQ8WW52 585 aa10.39□□□□□ -0.75
GTF2I-219ENST00000621040 TAOK2Q9UL54 1235 aa10.39□□□□□ -0.75
GTF2I-219ENST00000621040 CLEC11AQ9Y240 323 aa10.39□□□□□ -0.75
GTF2I-219ENST00000621040 TTC41PQ6P2S7 1318 aa10.39□□□□□ -0.75
GTF2I-219ENST00000621040 PLXNB2O15031 1838 aa10.39□□□□□ -0.75
GTF2I-219ENST00000621040 MAP2K2P36507 400 aa10.39□□□□□ -0.75
GTF2I-219ENST00000621040 DIXDC1Q155Q3 683 aa10.39□□□□□ -0.75
GTF2I-219ENST00000621040 RGS22Q8NE09 1264 aa10.39□□□□□ -0.75
GTF2I-219ENST00000621040 ANP32BQ92688 251 aaKnown RBP10.39□□□□□ -0.75
GTF2I-219ENST00000621040 GCC1Q96CN9 775 aa10.39□□□□□ -0.75
GTF2I-219ENST00000621040 TDRD3Q9H7E2 651 aaKnown RBP10.39□□□□□ -0.75
GTF2I-219ENST00000621040 FAM13BQ9NYF5 915 aa10.39□□□□□ -0.75
GTF2I-219ENST00000621040 BCCIPQ9P287 314 aaKnown RBP eCLIP10.39□□□□□ -0.75
GTF2I-219ENST00000621040 CHAF1AQ13111 956 aaPredicted RBP10.38□□□□□ -0.75
GTF2I-219ENST00000621040 TNFAIP1Q13829 316 aa10.38□□□□□ -0.75
GTF2I-219ENST00000621040 CCDC158Q5M9N0 1113 aa10.38□□□□□ -0.75
GTF2I-219ENST00000621040 AACSQ86V21 672 aa10.38□□□□□ -0.75
GTF2I-219ENST00000621040 CDAN1Q8IWY9 1227 aa10.38□□□□□ -0.75
GTF2I-219ENST00000621040 PLCD3Q8N3E9 789 aa10.38□□□□□ -0.75
GTF2I-219ENST00000621040 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.38□□□□□ -0.75
GTF2I-219ENST00000621040 RIOK1Q9BRS2 568 aaKnown RBP10.38□□□□□ -0.75
GTF2I-219ENST00000621040 PHF20L1A8MW92 1017 aa10.38□□□□□ -0.75
GTF2I-219ENST00000621040 CCDC8Q9H0W5 538 aaPredicted RBP10.38□□□□□ -0.75
GTF2I-219ENST00000621040 OSBPL3Q9H4L5 887 aa10.38□□□□□ -0.75
GTF2I-219ENST00000621040 DDX4Q9NQI0 724 aaKnown RBP10.38□□□□□ -0.75
GTF2I-219ENST00000621040 PRDM10Q9NQV6 1147 aa10.38□□□□□ -0.75
GTF2I-219ENST00000621040 WBP1LQ9NX94 342 aa10.38□□□□□ -0.75
GTF2I-219ENST00000621040 VGLL3A8MV65 326 aa10.37□□□□□ -0.75
GTF2I-219ENST00000621040 GSTO1P78417 241 aa10.37□□□□□ -0.75
GTF2I-219ENST00000621040 RASA3Q14644 834 aa10.37□□□□□ -0.75
GTF2I-219ENST00000621040 DEFB115Q30KQ5 88 aa10.37□□□□□ -0.75
GTF2I-219ENST00000621040 TTC39AQ5SRH9 613 aa10.37□□□□□ -0.75
GTF2I-219ENST00000621040 CERS3Q8IU89 383 aa10.37□□□□□ -0.75
GTF2I-219ENST00000621040 REM2Q8IYK8 340 aaPredicted RBP10.37□□□□□ -0.75
GTF2I-219ENST00000621040 KIF2CQ99661 725 aa10.37□□□□□ -0.75
GTF2I-219ENST00000621040 NOM1Q5C9Z4 860 aaKnown RBP10.37□□□□□ -0.75
GTF2I-219ENST00000621040 RBM26Q5T8P6 1007 aaKnown RBP10.37□□□□□ -0.75
GTF2I-219ENST00000621040 RGMBQ6NW40 437 aa10.37□□□□□ -0.75
GTF2I-219ENST00000621040 SLF2Q8IX21 1173 aa10.37□□□□□ -0.75
GTF2I-219ENST00000621040 CLASRPQ8N2M8 674 aaKnown RBP10.37□□□□□ -0.75
GTF2I-219ENST00000621040 TRIM44Q96DX7 344 aaPredicted RBP10.37□□□□□ -0.75
GTF2I-219ENST00000621040 SAGE1Q9NXZ1 904 aa10.37□□□□□ -0.75
GTF2I-219ENST00000621040 MYO1BO43795 1136 aa10.36□□□□□ -0.75
GTF2I-219ENST00000621040 NFIAQ12857 509 aa10.36□□□□□ -0.75
GTF2I-219ENST00000621040 SAMD1Q6SPF0 538 aaPredicted RBP10.36□□□□□ -0.75
GTF2I-219ENST00000621040 FBXW7Q969H0 707 aa10.36□□□□□ -0.75
GTF2I-219ENST00000621040 NEUROD6Q96NK8 337 aa10.36□□□□□ -0.75
GTF2I-219ENST00000621040 F8W031 263 aaPredicted RBP10.36□□□□□ -0.75
GTF2I-219ENST00000621040 NBPF12Q5TAG4 269 aaPredicted RBP10.36□□□□□ -0.75
GTF2I-219ENST00000621040 IL1RAPL2Q9NP60 686 aa10.36□□□□□ -0.75
GTF2I-219ENST00000621040 ROBO3Q96MS0 1386 aa10.36□□□□□ -0.75
GTF2I-219ENST00000621040 ZSWIM8A7E2V4 1837 aa10.36□□□□□ -0.75
GTF2I-219ENST00000621040 ZNF236Q9UL36 1845 aa10.36□□□□□ -0.75
GTF2I-219ENST00000621040 GJA5P36382 358 aa10.36□□□□□ -0.75
GTF2I-219ENST00000621040 BTDP43251 543 aa10.36□□□□□ -0.75
GTF2I-219ENST00000621040 TM4SF4P48230 202 aa10.36□□□□□ -0.75
GTF2I-219ENST00000621040 NUCB1Q02818 461 aa10.36□□□□□ -0.75
GTF2I-219ENST00000621040 TTF1Q15361 905 aaPredicted RBP10.36□□□□□ -0.75
GTF2I-219ENST00000621040 TBC1D9Q6ZT07 1266 aa10.36□□□□□ -0.75
GTF2I-219ENST00000621040 ZSCAN30Q86W11 494 aa10.36□□□□□ -0.75
GTF2I-219ENST00000621040 CAPNS2Q96L46 248 aa10.36□□□□□ -0.75
GTF2I-219ENST00000621040 CLRN2A0PK11 232 aa10.35□□□□□ -0.75
GTF2I-219ENST00000621040 MOGSQ13724 837 aa10.35□□□□□ -0.75
GTF2I-219ENST00000621040 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.35□□□□□ -0.75
GTF2I-219ENST00000621040 ZFPM1Q8IX07 1006 aa10.35□□□□□ -0.75
GTF2I-219ENST00000621040 TMEM39BQ9GZU3 492 aa10.35□□□□□ -0.75
GTF2I-219ENST00000621040 ZBTB48P10074 688 aaPredicted RBP10.35□□□□□ -0.75
GTF2I-219ENST00000621040 ADD2P35612 726 aa10.35□□□□□ -0.75
GTF2I-219ENST00000621040 C2orf69Q8N8R5 385 aa10.35□□□□□ -0.75
GTF2I-219ENST00000621040 SPRYD3Q8NCJ5 442 aa10.35□□□□□ -0.75
GTF2I-219ENST00000621040 PPP1R9BQ96SB3 815 aa10.35□□□□□ -0.75
GTF2I-219ENST00000621040 CD2BP2O95400 341 aaKnown RBP10.35□□□□□ -0.75
GTF2I-219ENST00000621040 ECE1P42892 770 aa10.35□□□□□ -0.75
GTF2I-219ENST00000621040 CCDC102AQ96A19 550 aa10.35□□□□□ -0.75
GTF2I-219ENST00000621040 ECHDC1Q9NTX5 307 aa10.35□□□□□ -0.75
GTF2I-219ENST00000621040 SNCAIPQ9Y6H5 919 aa10.35□□□□□ -0.75
GTF2I-219ENST00000621040 TNNI2P48788 182 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms