RNA–Protein interactions for RNA: ENST00000620902.1

MALAT1-217, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 3 BASIC

Gene MALAT1, Length 352 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-217ENST00000620902 SOX18P35713 384 aa12.59□□□□□ -0.39
MALAT1-217ENST00000620902 PLAURQ03405 335 aa12.59□□□□□ -0.39
MALAT1-217ENST00000620902 CHRNA2Q15822 529 aa12.59□□□□□ -0.39
MALAT1-217ENST00000620902 ZNF326Q5BKZ1 582 aaKnown RBP12.59□□□□□ -0.39
MALAT1-217ENST00000620902 FAM35AQ86V20 835 aa12.59□□□□□ -0.39
MALAT1-217ENST00000620902 PHRF1Q9P1Y6 1649 aaKnown RBP12.59□□□□□ -0.39
MALAT1-217ENST00000620902 ALS2Q96Q42 1657 aa12.58□□□□□ -0.4
MALAT1-217ENST00000620902 ZBTB42B2RXF5 422 aa12.58□□□□□ -0.4
MALAT1-217ENST00000620902 NPR3P17342 541 aa12.58□□□□□ -0.4
MALAT1-217ENST00000620902 COL9A3Q14050 684 aaPredicted RBP12.58□□□□□ -0.4
MALAT1-217ENST00000620902 MYOM3Q5VTT5 1437 aa12.58□□□□□ -0.4
MALAT1-217ENST00000620902 PSAPL1Q6NUJ1 521 aa12.58□□□□□ -0.4
MALAT1-217ENST00000620902 SMC1BQ8NDV3 1235 aa12.58□□□□□ -0.4
MALAT1-217ENST00000620902 FRRS1LQ9P0K9 344 aa12.58□□□□□ -0.4
MALAT1-217ENST00000620902 RGPD8O14715 1765 aaPredicted RBP12.58□□□□□ -0.4
MALAT1-217ENST00000620902 CICQ96RK0 1608 aaPredicted RBP12.58□□□□□ -0.4
MALAT1-217ENST00000620902 KIAA0232Q92628 1395 aa12.57□□□□□ -0.4
MALAT1-217ENST00000620902 MMP20O60882 483 aa12.57□□□□□ -0.4
MALAT1-217ENST00000620902 RGS9O75916 674 aaPredicted RBP12.57□□□□□ -0.4
MALAT1-217ENST00000620902 FAM13AO94988 1023 aa12.57□□□□□ -0.4
MALAT1-217ENST00000620902 HOXD8P13378 290 aaPredicted RBP12.57□□□□□ -0.4
MALAT1-217ENST00000620902 PCSK2P16519 638 aa12.57□□□□□ -0.4
MALAT1-217ENST00000620902 LBX1P52954 281 aa12.57□□□□□ -0.4
MALAT1-217ENST00000620902 EVA1CP58658 441 aa12.57□□□□□ -0.4
MALAT1-217ENST00000620902 NAGPAQ9UK23 515 aa12.57□□□□□ -0.4
MALAT1-217ENST00000620902 THRAP3Q9Y2W1 955 aaKnown RBP12.57□□□□□ -0.4
MALAT1-217ENST00000620902 E9PCH4 1651 aa12.57□□□□□ -0.4
MALAT1-217ENST00000620902 TRPM3Q9HCF6 1732 aaPredicted RBP12.57□□□□□ -0.4
MALAT1-217ENST00000620902 CUL9Q8IWT3 2517 aa12.56□□□□□ -0.4
MALAT1-217ENST00000620902 DLL1O00548 723 aa12.56□□□□□ -0.4
MALAT1-217ENST00000620902 IGHA1P01876 353 aa12.56□□□□□ -0.4
MALAT1-217ENST00000620902 FKBP4Q02790 459 aaKnown RBP eCLIP12.56□□□□□ -0.4
MALAT1-217ENST00000620902 C8orf86Q6ZUL3 223 aa12.56□□□□□ -0.4
MALAT1-217ENST00000620902 JPH1Q9HDC5 661 aaPredicted RBP12.56□□□□□ -0.4
MALAT1-217ENST00000620902 C10orf71Q711Q0 1435 aa12.55□□□□□ -0.4
MALAT1-217ENST00000620902 NID1P14543 1247 aa12.55□□□□□ -0.4
MALAT1-217ENST00000620902 CPB1P15086 417 aa12.55□□□□□ -0.4
MALAT1-217ENST00000620902 MPSTP25325 297 aa12.55□□□□□ -0.4
MALAT1-217ENST00000620902 EIF1AXP47813 144 aaKnown RBP12.55□□□□□ -0.4
MALAT1-217ENST00000620902 ATCAYQ86WG3 371 aa12.55□□□□□ -0.4
MALAT1-217ENST00000620902 TTC9Q92623 222 aa12.55□□□□□ -0.4
MALAT1-217ENST00000620902 NUDT16Q96DE0 195 aaKnown RBP12.55□□□□□ -0.4
MALAT1-217ENST00000620902 CD2APQ9Y5K6 639 aa12.55□□□□□ -0.4
MALAT1-217ENST00000620902 PNPLA7Q6ZV29 1317 aa12.55□□□□□ -0.4
MALAT1-217ENST00000620902 BCL9O00512 1426 aa12.54□□□□□ -0.4
MALAT1-217ENST00000620902 MZF1P28698 734 aaPredicted RBP12.54□□□□□ -0.4
MALAT1-217ENST00000620902 PLA2G4EQ3MJ16 856 aa12.54□□□□□ -0.4
MALAT1-217ENST00000620902 TTC39BQ5VTQ0 682 aaPredicted RBP12.54□□□□□ -0.4
MALAT1-217ENST00000620902 PDE12Q6L8Q7 609 aaKnown RBP12.54□□□□□ -0.4
MALAT1-217ENST00000620902 ELMSAN1Q6PJG2 1045 aa12.54□□□□□ -0.4
MALAT1-217ENST00000620902 NUDT8Q8WV74 236 aa12.54□□□□□ -0.4
MALAT1-217ENST00000620902 EGFL7Q9UHF1 273 aa12.54□□□□□ -0.4
MALAT1-217ENST00000620902 LOC102724428A0A0B4J2F2 783 aa12.53□□□□□ -0.4
MALAT1-217ENST00000620902 KRBA1A5PL33 1030 aa12.53□□□□□ -0.4
MALAT1-217ENST00000620902 ABL1P00519 1130 aa12.53□□□□□ -0.4
MALAT1-217ENST00000620902 SIK1P57059 783 aa12.53□□□□□ -0.4
MALAT1-217ENST00000620902 MTMR3Q13615 1198 aa12.53□□□□□ -0.4
MALAT1-217ENST00000620902 PRRT3Q5FWE3 981 aa12.53□□□□□ -0.4
MALAT1-217ENST00000620902 PERM1Q5SV97 790 aa12.53□□□□□ -0.4
MALAT1-217ENST00000620902 TTC16Q8NEE8 873 aa12.53□□□□□ -0.4
MALAT1-217ENST00000620902 OR13H1Q8NG92 308 aa12.53□□□□□ -0.4
MALAT1-217ENST00000620902 AKAP12Q02952 1782 aa12.53□□□□□ -0.4
MALAT1-217ENST00000620902 SPATA31C1P0DKV0 1188 aa12.52□□□□□ -0.41
MALAT1-217ENST00000620902 AFF1P51825 1210 aaKnown RBP12.52□□□□□ -0.41
MALAT1-217ENST00000620902 DDB1Q16531 1140 aa12.52□□□□□ -0.41
MALAT1-217ENST00000620902 EDEM1Q92611 657 aa12.52□□□□□ -0.41
MALAT1-217ENST00000620902 LPIN3Q9BQK8 851 aa12.52□□□□□ -0.41
MALAT1-217ENST00000620902 TUBGCP6Q96RT7 1819 aa12.52□□□□□ -0.41
MALAT1-217ENST00000620902 PXDNLA1KZ92 1463 aa12.52□□□□□ -0.41
MALAT1-217ENST00000620902 DNM1Q05193 864 aaKnown RBP12.51□□□□□ -0.41
MALAT1-217ENST00000620902 XKR5Q6UX68 686 aa12.51□□□□□ -0.41
MALAT1-217ENST00000620902 RBSNQ9H1K0 784 aa12.51□□□□□ -0.41
MALAT1-217ENST00000620902 ABI2Q9NYB9 513 aaPredicted RBP12.51□□□□□ -0.41
MALAT1-217ENST00000620902 IGSF1Q8N6C5 1336 aa12.51□□□□□ -0.41
MALAT1-217ENST00000620902 CLTCL1P53675 1640 aa12.51□□□□□ -0.41
MALAT1-217ENST00000620902 PDGFAP04085 211 aa12.5□□□□□ -0.41
MALAT1-217ENST00000620902 TRIM28Q13263 835 aaKnown RBP12.5□□□□□ -0.41
MALAT1-217ENST00000620902 AAMPQ13685 434 aa12.5□□□□□ -0.41
MALAT1-217ENST00000620902 GPAT2Q6NUI2 795 aa12.5□□□□□ -0.41
MALAT1-217ENST00000620902 HFE2Q6ZVN8 426 aa12.5□□□□□ -0.41
MALAT1-217ENST00000620902 IFT172Q9UG01 1749 aa12.49□□□□□ -0.41
MALAT1-217ENST00000620902 TNRC6CQ9HCJ0 1690 aaKnown RBP12.49□□□□□ -0.41
MALAT1-217ENST00000620902 KCPQ6ZWJ8 1503 aa12.49□□□□□ -0.41
MALAT1-217ENST00000620902 GHRHP01286 108 aa12.49□□□□□ -0.41
MALAT1-217ENST00000620902 EIF2AK2P19525 551 aaKnown RBP12.49□□□□□ -0.41
MALAT1-217ENST00000620902 TRAPPC3LQ5T215 181 aa12.49□□□□□ -0.41
MALAT1-217ENST00000620902 ZNF438Q7Z4V0 828 aa12.49□□□□□ -0.41
MALAT1-217ENST00000620902 NSUN5Q96P11 429 aaKnown RBP12.49□□□□□ -0.41
MALAT1-217ENST00000620902 ELP3Q9H9T3 547 aa12.49□□□□□ -0.41
MALAT1-217ENST00000620902 BRD4O60885 1362 aaPredicted RBP12.48□□□□□ -0.41
MALAT1-217ENST00000620902 ANKRD30AQ9BXX3 1397 aa12.48□□□□□ -0.41
MALAT1-217ENST00000620902 USP5P45974 858 aa12.48□□□□□ -0.41
MALAT1-217ENST00000620902 WAPLQ7Z5K2 1190 aa12.48□□□□□ -0.41
MALAT1-217ENST00000620902 MARCH10Q8NA82 808 aaPredicted RBP12.48□□□□□ -0.41
MALAT1-217ENST00000620902 SMG9Q9H0W8 520 aaKnown RBP12.48□□□□□ -0.41
MALAT1-217ENST00000620902 KDM2BQ8NHM5 1336 aa12.47□□□□□ -0.41
MALAT1-217ENST00000620902 J3QW42 95 aa12.47□□□□□ -0.41
MALAT1-217ENST00000620902 ICMTO60725 284 aa12.47□□□□□ -0.41
MALAT1-217ENST00000620902 HSPA8P11142 646 aaKnown RBP12.47□□□□□ -0.41
MALAT1-217ENST00000620902 ZC3H6P61129 1189 aaKnown RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms