RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 A0A1W2PQ27 194 aa7.94□□□□□ -1.14
NEDD9-216ENST00000620854 A0A1W2PQ64 194 aa7.94□□□□□ -1.14
NEDD9-216ENST00000620854 A0A1W2PQD8 194 aa7.94□□□□□ -1.14
NEDD9-216ENST00000620854 CBFA2T2O43439 604 aa7.94□□□□□ -1.14
NEDD9-216ENST00000620854 CMA1P23946 247 aa7.94□□□□□ -1.14
NEDD9-216ENST00000620854 GRIN1Q05586 938 aa7.94□□□□□ -1.14
NEDD9-216ENST00000620854 IMMTQ16891 758 aaKnown RBP7.94□□□□□ -1.14
NEDD9-216ENST00000620854 DHX37Q8IY37 1157 aaKnown RBP7.94□□□□□ -1.14
NEDD9-216ENST00000620854 ZNF274Q96GC6 653 aaPredicted RBP7.94□□□□□ -1.14
NEDD9-216ENST00000620854 COPRSQ9NQ92 184 aa7.94□□□□□ -1.14
NEDD9-216ENST00000620854 CEMIPQ8WUJ3 1361 aa7.94□□□□□ -1.14
NEDD9-216ENST00000620854 A0A1B0GUL7 405 aa7.94□□□□□ -1.14
NEDD9-216ENST00000620854 H0YHG0 523 aa7.94□□□□□ -1.14
NEDD9-216ENST00000620854 POLR2DO15514 142 aaKnown RBP7.94□□□□□ -1.14
NEDD9-216ENST00000620854 ARHGAP6O43182 974 aa7.94□□□□□ -1.14
NEDD9-216ENST00000620854 CCP110O43303 1012 aa7.94□□□□□ -1.14
NEDD9-216ENST00000620854 AFMP43652 599 aa7.94□□□□□ -1.14
NEDD9-216ENST00000620854 KIF23Q02241 960 aaPredicted RBP7.94□□□□□ -1.14
NEDD9-216ENST00000620854 ZNF569Q5MCW4 686 aa7.94□□□□□ -1.14
NEDD9-216ENST00000620854 PPFIBP1Q86W92 1011 aa7.94□□□□□ -1.14
NEDD9-216ENST00000620854 VSTM4Q8IW00 320 aa7.94□□□□□ -1.14
NEDD9-216ENST00000620854 RASSF4Q9H2L5 321 aa7.94□□□□□ -1.14
NEDD9-216ENST00000620854 ACBD3Q9H3P7 528 aa7.94□□□□□ -1.14
NEDD9-216ENST00000620854 USP21Q9UK80 565 aa7.94□□□□□ -1.14
NEDD9-216ENST00000620854 KCNH3Q9ULD8 1083 aa7.94□□□□□ -1.14
NEDD9-216ENST00000620854 AXIN2Q9Y2T1 843 aa7.94□□□□□ -1.14
NEDD9-216ENST00000620854 PHLPP2Q6ZVD8 1323 aa7.94□□□□□ -1.14
NEDD9-216ENST00000620854 C3P01024 1663 aa7.94□□□□□ -1.14
NEDD9-216ENST00000620854 ZNF213O14771 459 aa7.93□□□□□ -1.14
NEDD9-216ENST00000620854 RNF113AO15541 343 aaKnown RBP7.93□□□□□ -1.14
NEDD9-216ENST00000620854 NKX2-3Q8TAU0 364 aa7.93□□□□□ -1.14
NEDD9-216ENST00000620854 MRPL44Q9H9J2 332 aaKnown RBP7.93□□□□□ -1.14
NEDD9-216ENST00000620854 BRMS1Q9HCU9 246 aa7.93□□□□□ -1.14
NEDD9-216ENST00000620854 INTS13Q9NVM9 706 aa7.93□□□□□ -1.14
NEDD9-216ENST00000620854 TULP2O00295 520 aa7.93□□□□□ -1.14
NEDD9-216ENST00000620854 TEX33O43247 280 aa7.93□□□□□ -1.14
NEDD9-216ENST00000620854 YEATS4O95619 227 aa7.93□□□□□ -1.14
NEDD9-216ENST00000620854 PHKG2P15735 406 aa7.93□□□□□ -1.14
NEDD9-216ENST00000620854 BMP6P22004 513 aa7.93□□□□□ -1.14
NEDD9-216ENST00000620854 ADORA1P30542 326 aa7.93□□□□□ -1.14
NEDD9-216ENST00000620854 CHMP4BP1P59074 171 aa7.93□□□□□ -1.14
NEDD9-216ENST00000620854 FAM193AP78312 1265 aa7.93□□□□□ -1.14
NEDD9-216ENST00000620854 FMR1Q06787 632 aaKnown RBP eCLIP7.93□□□□□ -1.14
NEDD9-216ENST00000620854 JAKMIP3Q5VZ66 844 aa7.93□□□□□ -1.14
NEDD9-216ENST00000620854 KRT40Q6A162 431 aa7.93□□□□□ -1.14
NEDD9-216ENST00000620854 LEKR1Q6ZMV7 388 aa7.93□□□□□ -1.14
NEDD9-216ENST00000620854 SMYD4Q8IYR2 804 aaPredicted RBP7.93□□□□□ -1.14
NEDD9-216ENST00000620854 GPR161Q8N6U8 529 aaKnown RBP7.93□□□□□ -1.14
NEDD9-216ENST00000620854 FUT8Q9BYC5 575 aa7.93□□□□□ -1.14
NEDD9-216ENST00000620854 PUS7LQ9H0K6 701 aaKnown RBP7.93□□□□□ -1.14
NEDD9-216ENST00000620854 POLR3EQ9NVU0 708 aa7.93□□□□□ -1.14
NEDD9-216ENST00000620854 PPP1R1BQ9UD71 204 aaPredicted RBP7.93□□□□□ -1.14
NEDD9-216ENST00000620854 KCNJ14Q9UNX9 436 aa7.93□□□□□ -1.14
NEDD9-216ENST00000620854 PXDNLA1KZ92 1463 aa7.93□□□□□ -1.14
NEDD9-216ENST00000620854 FER1L4A9Z1Z3 1794 aa7.93□□□□□ -1.14
NEDD9-216ENST00000620854 ABL1P00519 1130 aa7.93□□□□□ -1.14
NEDD9-216ENST00000620854 RFX5P48382 616 aaPredicted RBP7.93□□□□□ -1.14
NEDD9-216ENST00000620854 METTL16Q86W50 562 aaKnown RBP7.93□□□□□ -1.14
NEDD9-216ENST00000620854 TRIM22Q8IYM9 498 aa7.93□□□□□ -1.14
NEDD9-216ENST00000620854 GOLGA1Q92805 767 aa7.93□□□□□ -1.14
NEDD9-216ENST00000620854 CARD10Q9BWT7 1032 aa7.93□□□□□ -1.14
NEDD9-216ENST00000620854 SRRTQ9BXP5 876 aaKnown RBP7.93□□□□□ -1.14
NEDD9-216ENST00000620854 FAN1Q9Y2M0 1017 aa7.93□□□□□ -1.14
NEDD9-216ENST00000620854 NEDD4P46934 1319 aa7.93□□□□□ -1.14
NEDD9-216ENST00000620854 RFC4P35249 363 aa7.93□□□□□ -1.14
NEDD9-216ENST00000620854 METAP2P50579 478 aaKnown RBP eCLIP7.93□□□□□ -1.14
NEDD9-216ENST00000620854 MAP3K9P80192 1104 aa7.93□□□□□ -1.14
NEDD9-216ENST00000620854 SLC39A14Q15043 492 aa7.93□□□□□ -1.14
NEDD9-216ENST00000620854 ATL3Q6DD88 541 aa7.93□□□□□ -1.14
NEDD9-216ENST00000620854 ZKSCAN3Q9BRR0 538 aa7.93□□□□□ -1.14
NEDD9-216ENST00000620854 SLC26A6Q9BXS9 759 aa7.93□□□□□ -1.14
NEDD9-216ENST00000620854 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.93□□□□□ -1.14
NEDD9-216ENST00000620854 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.93□□□□□ -1.143e-15■■□□□ 11.6
NEDD9-216ENST00000620854 AKAP2Q9Y2D5 859 aa7.93□□□□□ -1.14
NEDD9-216ENST00000620854 WDR17Q8IZU2 1322 aa7.92□□□□□ -1.14
NEDD9-216ENST00000620854 ANKRD18BA2A2Z9 1011 aa7.92□□□□□ -1.14
NEDD9-216ENST00000620854 B4E1Z4 1266 aa7.92□□□□□ -1.14
NEDD9-216ENST00000620854 ZMYND10O75800 440 aa7.92□□□□□ -1.14
NEDD9-216ENST00000620854 PRR29P0C7W0 189 aa7.92□□□□□ -1.14
NEDD9-216ENST00000620854 PPARDQ03181 441 aa7.92□□□□□ -1.14
NEDD9-216ENST00000620854 SCARF1Q14162 830 aa7.92□□□□□ -1.14
NEDD9-216ENST00000620854 ZMYM1Q5SVZ6 1142 aa7.92□□□□□ -1.14
NEDD9-216ENST00000620854 FKBP15Q5T1M5 1219 aa7.92□□□□□ -1.14
NEDD9-216ENST00000620854 USP49Q70CQ1 688 aa7.92□□□□□ -1.14
NEDD9-216ENST00000620854 RGS22Q8NE09 1264 aa7.92□□□□□ -1.14
NEDD9-216ENST00000620854 IPO4Q8TEX9 1081 aaKnown RBP7.92□□□□□ -1.14
NEDD9-216ENST00000620854 CDC5LQ99459 802 aaKnown RBP7.92□□□□□ -1.14
NEDD9-216ENST00000620854 DSCC1Q9BVC3 393 aa7.92□□□□□ -1.14
NEDD9-216ENST00000620854 HPS5Q9UPZ3 1129 aa7.92□□□□□ -1.14
NEDD9-216ENST00000620854 BTBD18B2RXH4 712 aa7.92□□□□□ -1.14
NEDD9-216ENST00000620854 SPECC1LQ69YQ0 1117 aa7.92□□□□□ -1.14
NEDD9-216ENST00000620854 TC2NQ8N9U0 490 aa7.92□□□□□ -1.14
NEDD9-216ENST00000620854 ABCB6Q9NP58 842 aa7.92□□□□□ -1.14
NEDD9-216ENST00000620854 SERTAD1Q9UHV2 236 aa7.92□□□□□ -1.14
NEDD9-216ENST00000620854 MRFAP1Q9Y605 127 aa7.92□□□□□ -1.14
NEDD9-216ENST00000620854 ITSN1Q15811 1721 aa7.92□□□□□ -1.14
NEDD9-216ENST00000620854 hCG_1642624A0A1W2PR95 340 aa7.92□□□□□ -1.14
NEDD9-216ENST00000620854 CCT6AP40227 531 aaKnown RBP7.92□□□□□ -1.14
NEDD9-216ENST00000620854 DZIP3Q86Y13 1208 aaKnown RBP7.92□□□□□ -1.14
NEDD9-216ENST00000620854 NCOA7Q8NI08 942 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms