RNA–Protein interactions for RNA: ENST00000619438.4

SGMS1-210, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-210ENST00000619438 RAD50Q92878 1312 aa25.69■■□□□ 1.7
SGMS1-210ENST00000619438 MECOMQ03112 1051 aa25.68■■□□□ 1.7
SGMS1-210ENST00000619438 CCDC102AQ96A19 550 aa25.68■■□□□ 1.7
SGMS1-210ENST00000619438 EVI5LQ96CN4 794 aa25.68■■□□□ 1.7
SGMS1-210ENST00000619438 USP40Q9NVE5 1235 aa25.68■■□□□ 1.7
SGMS1-210ENST00000619438 THSD7BQ9C0I4 1608 aa25.68■■□□□ 1.7
SGMS1-210ENST00000619438 AOC2O75106 756 aa25.68■■□□□ 1.7
SGMS1-210ENST00000619438 RUFY2Q8WXA3 655 aa25.68■■□□□ 1.7
SGMS1-210ENST00000619438 ANGEL1Q9UNK9 670 aaKnown RBP25.68■■□□□ 1.7
SGMS1-210ENST00000619438 MAP4K4O95819 1239 aaPredicted RBP25.67■■□□□ 1.7
SGMS1-210ENST00000619438 LDHCP07864 332 aa25.67■■□□□ 1.7
SGMS1-210ENST00000619438 ZAP70P43403 619 aa25.67■■□□□ 1.7
SGMS1-210ENST00000619438 GSTO1P78417 241 aa25.67■■□□□ 1.7
SGMS1-210ENST00000619438 NUCB2P80303 420 aa25.67■■□□□ 1.7
SGMS1-210ENST00000619438 CDC42EP5Q6NZY7 148 aa25.67■■□□□ 1.7
SGMS1-210ENST00000619438 TMEM39BQ9GZU3 492 aa25.67■■□□□ 1.7
SGMS1-210ENST00000619438 IL25Q9H293 177 aa25.67■■□□□ 1.7
SGMS1-210ENST00000619438 PALD1Q9ULE6 856 aa25.67■■□□□ 1.7
SGMS1-210ENST00000619438 MAP2K2P36507 400 aa25.66■■□□□ 1.7
SGMS1-210ENST00000619438 NEK4P51957 841 aa25.66■■□□□ 1.7
SGMS1-210ENST00000619438 LSG1Q9H089 658 aaKnown RBP25.66■■□□□ 1.7
SGMS1-210ENST00000619438 MAP2K1Q02750 393 aaPredicted RBP25.65■■□□□ 1.7
SGMS1-210ENST00000619438 FKBP1CQ5VVH2 108 aa25.65■■□□□ 1.7
SGMS1-210ENST00000619438 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.65■■□□□ 1.7
SGMS1-210ENST00000619438 FZD1Q9UP38 647 aa25.65■■□□□ 1.7
SGMS1-210ENST00000619438 PAPPA2Q9BXP8 1791 aa25.65■■□□□ 1.7
SGMS1-210ENST00000619438 HIP1O00291 1037 aa25.64■■□□□ 1.7
SGMS1-210ENST00000619438 CYP2E1P05181 493 aaPredicted RBP25.64■■□□□ 1.7
SGMS1-210ENST00000619438 NOGQ13253 232 aa25.64■■□□□ 1.7
SGMS1-210ENST00000619438 FAM83AQ86UY5 434 aa25.64■■□□□ 1.7
SGMS1-210ENST00000619438 NSUN4Q96CB9 384 aaKnown RBP25.64■■□□□ 1.7
SGMS1-210ENST00000619438 FAM163AQ96GL9 167 aaPredicted RBP25.64■■□□□ 1.7
SGMS1-210ENST00000619438 AIDAQ96BJ3 306 aa25.64■■□□□ 1.69
SGMS1-210ENST00000619438 BEGAINQ9BUH8 593 aa25.64■■□□□ 1.69
SGMS1-210ENST00000619438 FOXD4L1Q9NU39 408 aa25.64■■□□□ 1.69
SGMS1-210ENST00000619438 TCP10Q12799 353 aa25.63■■□□□ 1.69
SGMS1-210ENST00000619438 DIAPH3Q9NSV4 1193 aa25.63■■□□□ 1.69
SGMS1-210ENST00000619438 WBP1LQ9NX94 342 aa25.63■■□□□ 1.69
SGMS1-210ENST00000619438 MROH7-TTC4A0A0A0MT08 1334 aa25.63■■□□□ 1.69
SGMS1-210ENST00000619438 GAKO14976 1311 aa25.62■■□□□ 1.69
SGMS1-210ENST00000619438 TRAK2O60296 914 aa25.62■■□□□ 1.69
SGMS1-210ENST00000619438 BTDP43251 543 aa25.62■■□□□ 1.69
SGMS1-210ENST00000619438 CUL4AQ13619 759 aa25.62■■□□□ 1.69
SGMS1-210ENST00000619438 TEPSINQ96N21 525 aa25.62■■□□□ 1.69
SGMS1-210ENST00000619438 FOXN1O15353 648 aa25.61■■□□□ 1.69
SGMS1-210ENST00000619438 IREB2P48200 963 aaKnown RBP25.61■■□□□ 1.69
SGMS1-210ENST00000619438 NAA16Q6N069 864 aaPredicted RBP25.61■■□□□ 1.69
SGMS1-210ENST00000619438 KIAA1211Q6ZU35 1233 aa25.61■■□□□ 1.69
SGMS1-210ENST00000619438 NOL10Q9BSC4 688 aaKnown RBP25.61■■□□□ 1.69
SGMS1-210ENST00000619438 FAM151AQ8WW52 585 aa25.61■■□□□ 1.69
SGMS1-210ENST00000619438 HOOK2Q96ED9 719 aa25.61■■□□□ 1.69
SGMS1-210ENST00000619438 NDUFB9Q9Y6M9 179 aa25.61■■□□□ 1.69
SGMS1-210ENST00000619438 GPR75-ASB3A0A0A6YYF3 556 aa25.6■■□□□ 1.69
SGMS1-210ENST00000619438 IDH1O75874 414 aaKnown RBP25.6■■□□□ 1.69
SGMS1-210ENST00000619438 NFIAQ12857 509 aa25.6■■□□□ 1.69
SGMS1-210ENST00000619438 CDAN1Q8IWY9 1227 aa25.6■■□□□ 1.69
SGMS1-210ENST00000619438 ZNF384Q8TF68 577 aa25.6■■□□□ 1.69
SGMS1-210ENST00000619438 SLC10A4Q96EP9 437 aa25.6■■□□□ 1.69
SGMS1-210ENST00000619438 INTS4Q96HW7 963 aaKnown RBP25.6■■□□□ 1.69
SGMS1-210ENST00000619438 TMX3Q96JJ7 454 aa25.6■■□□□ 1.69
SGMS1-210ENST00000619438 ZIC5Q96T25 663 aa25.6■■□□□ 1.69
SGMS1-210ENST00000619438 FAM155AB1AL88 458 aaPredicted RBP25.59■■□□□ 1.69
SGMS1-210ENST00000619438 USP2O75604 605 aaPredicted RBP25.59■■□□□ 1.69
SGMS1-210ENST00000619438 SLC10A3P09131 477 aa25.59■■□□□ 1.69
SGMS1-210ENST00000619438 CWC27Q6UX04 472 aaKnown RBP25.59■■□□□ 1.69
SGMS1-210ENST00000619438 PIH1D3Q9NQM4 214 aaKnown RBP25.59■■□□□ 1.69
SGMS1-210ENST00000619438 SKOR2Q2VWA4 1001 aaPredicted RBP25.58■■□□□ 1.69
SGMS1-210ENST00000619438 LDLRAD1Q5T700 205 aa25.58■■□□□ 1.69
SGMS1-210ENST00000619438 KCNB2Q92953 911 aa25.58■■□□□ 1.69
SGMS1-210ENST00000619438 BAG3O95817 575 aa25.58■■□□□ 1.68
SGMS1-210ENST00000619438 KIF23Q02241 960 aaPredicted RBP25.58■■□□□ 1.68
SGMS1-210ENST00000619438 MAP3K11Q16584 847 aa25.58■■□□□ 1.68
SGMS1-210ENST00000619438 COL13A1Q5TAT6 717 aaPredicted RBP25.58■■□□□ 1.68
SGMS1-210ENST00000619438 RASAL3Q86YV0 1011 aa25.58■■□□□ 1.68
SGMS1-210ENST00000619438 IGSF3O75054 1194 aa25.57■■□□□ 1.68
SGMS1-210ENST00000619438 ATP5JP18859 108 aa25.57■■□□□ 1.68
SGMS1-210ENST00000619438 ZSCAN29Q8IWY8 852 aaPredicted RBP25.57■■□□□ 1.68
SGMS1-210ENST00000619438 DNAJC2Q99543 621 aaKnown RBP25.57■■□□□ 1.68
SGMS1-210ENST00000619438 FAM198AQ9UFP1 575 aa25.57■■□□□ 1.68
SGMS1-210ENST00000619438 SNX14Q9Y5W7 946 aa25.57■■□□□ 1.68
SGMS1-210ENST00000619438 MYH2Q9UKX2 1941 aa25.57■■□□□ 1.68
SGMS1-210ENST00000619438 MAP3K12Q12852 859 aa25.56■■□□□ 1.68
SGMS1-210ENST00000619438 PICALMQ13492 652 aa25.56■■□□□ 1.68
SGMS1-210ENST00000619438 TTF1Q15361 905 aaPredicted RBP25.56■■□□□ 1.68
SGMS1-210ENST00000619438 ANKRD13AQ8IZ07 590 aa25.56■■□□□ 1.68
SGMS1-210ENST00000619438 IDI2Q9BXS1 227 aa25.56■■□□□ 1.68
SGMS1-210ENST00000619438 RFX7Q2KHR2 1363 aa25.56■■□□□ 1.68
SGMS1-210ENST00000619438 MKRN3Q13064 507 aaKnown RBP25.55■■□□□ 1.68
SGMS1-210ENST00000619438 PPIL4Q8WUA2 492 aaKnown RBP eCLIP25.55■■□□□ 1.68
SGMS1-210ENST00000619438 BOLA2Q9H3K6 86 aa25.55■■□□□ 1.68
SGMS1-210ENST00000619438 SSC5DA1L4H1 1573 aa25.55■■□□□ 1.68
SGMS1-210ENST00000619438 UNCXA6NJT0 531 aa25.55■■□□□ 1.68
SGMS1-210ENST00000619438 DCAF15Q66K64 600 aa25.55■■□□□ 1.68
SGMS1-210ENST00000619438 MIGA2Q7L4E1 593 aa25.55■■□□□ 1.68
SGMS1-210ENST00000619438 AATFQ9NY61 560 aaKnown RBP eCLIP25.55■■□□□ 1.68
SGMS1-210ENST00000619438 GOLGA6L22H0YM25 854 aa25.54■■□□□ 1.68
SGMS1-210ENST00000619438 GOLIM4O00461 696 aa25.54■■□□□ 1.68
SGMS1-210ENST00000619438 ENTPD3O75355 529 aa25.54■■□□□ 1.68
SGMS1-210ENST00000619438 CYP7A1P22680 504 aa25.54■■□□□ 1.68
SGMS1-210ENST00000619438 CTCFP49711 727 aaPredicted RBP25.54■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms