RNA–Protein interactions for RNA: ENST00000619146.1

SYN3-213, Transcript of synapsin III, humanhuman

TSL 5 BASIC

Gene SYN3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-213ENST00000619146 GRK4P32298 578 aa11.32□□□□□ -0.6
SYN3-213ENST00000619146 SNAPC2Q13487 334 aa11.32□□□□□ -0.6
SYN3-213ENST00000619146 ERO1BQ86YB8 467 aa11.32□□□□□ -0.6
SYN3-213ENST00000619146 ERC1Q8IUD2 1116 aa11.32□□□□□ -0.6
SYN3-213ENST00000619146 FAM84BQ96KN1 310 aaPredicted RBP11.32□□□□□ -0.6
SYN3-213ENST00000619146 COPRSQ9NQ92 184 aa11.32□□□□□ -0.6
SYN3-213ENST00000619146 RIPOR2Q9Y4F9 1068 aa11.32□□□□□ -0.6
SYN3-213ENST00000619146 LAMA2P24043 3122 aaKnown RBP11.32□□□□□ -0.6
SYN3-213ENST00000619146 DNAH12Q6ZR08 3092 aa11.32□□□□□ -0.6
SYN3-213ENST00000619146 PLXNB2O15031 1838 aa11.31□□□□□ -0.6
SYN3-213ENST00000619146 PDHXO00330 501 aa11.31□□□□□ -0.6
SYN3-213ENST00000619146 FRAT2O75474 233 aaPredicted RBP11.31□□□□□ -0.6
SYN3-213ENST00000619146 SURF6O75683 361 aaKnown RBP11.31□□□□□ -0.6
SYN3-213ENST00000619146 C17orf99Q6UX52 265 aa11.31□□□□□ -0.6
SYN3-213ENST00000619146 VPS37DQ86XT2 251 aa11.31□□□□□ -0.6
SYN3-213ENST00000619146 UNC93B1Q9H1C4 597 aa11.31□□□□□ -0.6
SYN3-213ENST00000619146 SRRDQ9UH36 339 aa11.31□□□□□ -0.6
SYN3-213ENST00000619146 FBXO3Q9UK99 471 aa11.31□□□□□ -0.6
SYN3-213ENST00000619146 GABRQQ9UN88 632 aa11.31□□□□□ -0.6
SYN3-213ENST00000619146 FRMPD3Q5JV73 1810 aa11.3□□□□□ -0.6
SYN3-213ENST00000619146 CIAO1O76071 339 aa11.3□□□□□ -0.6
SYN3-213ENST00000619146 FARP2O94887 1054 aaPredicted RBP11.3□□□□□ -0.6
SYN3-213ENST00000619146 CYP2C8P10632 490 aa11.3□□□□□ -0.6
SYN3-213ENST00000619146 ELNP15502 786 aa11.3□□□□□ -0.6
SYN3-213ENST00000619146 RFX5P48382 616 aaPredicted RBP11.3□□□□□ -0.6
SYN3-213ENST00000619146 NUCB1Q02818 461 aa11.3□□□□□ -0.6
SYN3-213ENST00000619146 PRKCZQ05513 592 aa11.3□□□□□ -0.6
SYN3-213ENST00000619146 TCP10Q12799 353 aa11.3□□□□□ -0.6
SYN3-213ENST00000619146 G3BP1Q13283 466 aaKnown RBP eCLIP11.3□□□□□ -0.6
SYN3-213ENST00000619146 PPIL2Q13356 520 aa11.3□□□□□ -0.6
SYN3-213ENST00000619146 OS9Q13438 667 aaPredicted RBP11.3□□□□□ -0.6
SYN3-213ENST00000619146 ANKRD45Q5TZF3 282 aa11.3□□□□□ -0.6
SYN3-213ENST00000619146 STAP2Q9UGK3 403 aa11.3□□□□□ -0.6
SYN3-213ENST00000619146 TAOK2Q9UL54 1235 aa11.3□□□□□ -0.6
SYN3-213ENST00000619146 GJA8P48165 433 aa11.29□□□□□ -0.6
SYN3-213ENST00000619146 CHD1LQ86WJ1 897 aa11.29□□□□□ -0.6
SYN3-213ENST00000619146 TEKT1Q969V4 418 aa11.29□□□□□ -0.6
SYN3-213ENST00000619146 KIF1BPQ96EK5 621 aa11.29□□□□□ -0.6
SYN3-213ENST00000619146 HTATIP2Q9BUP3 242 aa11.29□□□□□ -0.6
SYN3-213ENST00000619146 LRRCC1Q9C099 1032 aa11.29□□□□□ -0.6
SYN3-213ENST00000619146 TMOD2Q9NZR1 351 aa11.29□□□□□ -0.6
SYN3-213ENST00000619146 EXOC6BQ9Y2D4 811 aa11.29□□□□□ -0.6
SYN3-213ENST00000619146 MYO5AQ9Y4I1 1855 aaKnown RBP11.28□□□□□ -0.6
SYN3-213ENST00000619146 EYA2O00167 538 aa11.28□□□□□ -0.6
SYN3-213ENST00000619146 GJB1P08034 283 aa11.28□□□□□ -0.6
SYN3-213ENST00000619146 IL15P40933 162 aaPredicted RBP11.28□□□□□ -0.6
SYN3-213ENST00000619146 UBE4AQ14139 1066 aa11.28□□□□□ -0.6
SYN3-213ENST00000619146 LRRC24Q50LG9 513 aa11.28□□□□□ -0.6
SYN3-213ENST00000619146 U2AF1L4Q8WU68 220 aaKnown RBP11.28□□□□□ -0.6
SYN3-213ENST00000619146 PRO3102Q9H379 93 aa11.28□□□□□ -0.6
SYN3-213ENST00000619146 ADGRA2Q96PE1 1338 aa11.28□□□□□ -0.6
SYN3-213ENST00000619146 EVI5O60447 810 aa11.27□□□□□ -0.61
SYN3-213ENST00000619146 GNRH1P01148 92 aa11.27□□□□□ -0.61
SYN3-213ENST00000619146 TFRCP02786 760 aaKnown RBP11.27□□□□□ -0.61
SYN3-213ENST00000619146 SLURP2P0DP57 97 aa11.27□□□□□ -0.61
SYN3-213ENST00000619146 HOXD10P28358 340 aa11.27□□□□□ -0.61
SYN3-213ENST00000619146 BCAMP50895 628 aa11.27□□□□□ -0.61
SYN3-213ENST00000619146 PRMT2P55345 433 aa11.27□□□□□ -0.61
SYN3-213ENST00000619146 UBXN2AP68543 259 aa11.27□□□□□ -0.61
SYN3-213ENST00000619146 Q7L0L9 218 aa11.27□□□□□ -0.61
SYN3-213ENST00000619146 UBE2Q1Q7Z7E8 422 aa11.27□□□□□ -0.61
SYN3-213ENST00000619146 KLHDC4Q8TBB5 520 aa11.27□□□□□ -0.61
SYN3-213ENST00000619146 RHPN1Q8TCX5 695 aa11.27□□□□□ -0.61
SYN3-213ENST00000619146 DEFB118Q96PH6 123 aa11.27□□□□□ -0.61
SYN3-213ENST00000619146 ZNF341Q9BYN7 854 aa11.27□□□□□ -0.61
SYN3-213ENST00000619146 PA2G4Q9UQ80 394 aaKnown RBP11.27□□□□□ -0.61
SYN3-213ENST00000619146 NR2E3Q9Y5X4 410 aa11.27□□□□□ -0.61
SYN3-213ENST00000619146 ADCY3O60266 1144 aa11.26□□□□□ -0.61
SYN3-213ENST00000619146 PPATQ06203 517 aa11.26□□□□□ -0.61
SYN3-213ENST00000619146 MOGSQ13724 837 aa11.26□□□□□ -0.61
SYN3-213ENST00000619146 METTL24Q5JXM2 366 aa11.26□□□□□ -0.61
SYN3-213ENST00000619146 DCAF15Q66K64 600 aa11.26□□□□□ -0.61
SYN3-213ENST00000619146 APOBEC3HQ6NTF7 200 aaKnown RBP11.26□□□□□ -0.61
SYN3-213ENST00000619146 GADL1Q6ZQY3 521 aa11.26□□□□□ -0.61
SYN3-213ENST00000619146 FBXO33Q7Z6M2 555 aa11.26□□□□□ -0.61
SYN3-213ENST00000619146 ANKRD23Q86SG2 305 aa11.26□□□□□ -0.61
SYN3-213ENST00000619146 CLASRPQ8N2M8 674 aaKnown RBP11.26□□□□□ -0.61
SYN3-213ENST00000619146 NKX2-3Q8TAU0 364 aa11.26□□□□□ -0.61
SYN3-213ENST00000619146 DIS3LQ8TF46 1054 aaKnown RBP11.26□□□□□ -0.61
SYN3-213ENST00000619146 SIL1Q9H173 461 aa11.26□□□□□ -0.61
SYN3-213ENST00000619146 ZCCHC17Q9NP64 241 aaKnown RBP11.26□□□□□ -0.61
SYN3-213ENST00000619146 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.26□□□□□ -0.61
SYN3-213ENST00000619146 ZMYND8Q9ULU4 1186 aaPredicted RBP11.26□□□□□ -0.61
SYN3-213ENST00000619146 EYSQ5T1H1 3165 aa11.26□□□□□ -0.61
SYN3-213ENST00000619146 APBB1O00213 710 aa11.25□□□□□ -0.61
SYN3-213ENST00000619146 SGPL1O95470 568 aa11.25□□□□□ -0.61
SYN3-213ENST00000619146 INHAP05111 366 aa11.25□□□□□ -0.61
SYN3-213ENST00000619146 FCGRTP55899 365 aa11.25□□□□□ -0.61
SYN3-213ENST00000619146 NFIAQ12857 509 aa11.25□□□□□ -0.61
SYN3-213ENST00000619146 DIXDC1Q155Q3 683 aa11.25□□□□□ -0.61
SYN3-213ENST00000619146 GPAT2Q6NUI2 795 aa11.25□□□□□ -0.61
SYN3-213ENST00000619146 CCDC84Q86UT8 332 aaPredicted RBP11.25□□□□□ -0.61
SYN3-213ENST00000619146 ZFPM1Q8IX07 1006 aa11.25□□□□□ -0.61
SYN3-213ENST00000619146 C7orf61Q8IZ16 206 aa11.25□□□□□ -0.61
SYN3-213ENST00000619146 PAWRQ96IZ0 340 aaKnown RBP11.25□□□□□ -0.61
SYN3-213ENST00000619146 ZDHHC15Q96MV8 337 aa11.25□□□□□ -0.61
SYN3-213ENST00000619146 LNPKQ9C0E8 428 aa11.25□□□□□ -0.61
SYN3-213ENST00000619146 CEP126Q9P2H0 1117 aa11.25□□□□□ -0.61
SYN3-213ENST00000619146 LOC285556D6RIA3 1793 aa11.25□□□□□ -0.61
SYN3-213ENST00000619146 SYN1P17600 705 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms