RNA–Protein interactions for RNA: ENST00000617958.4

CPEB1-215, Transcript of cytoplasmic polyadenylation element binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene CPEB1, Length 2,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB1-215ENST00000617958 WLSQ5T9L3 541 aa12.22□□□□□ -0.45
CPEB1-215ENST00000617958 B4GALNT4Q76KP1 1039 aa12.22□□□□□ -0.45
CPEB1-215ENST00000617958 YTHDF3Q7Z739 585 aaKnown RBP12.22□□□□□ -0.45
CPEB1-215ENST00000617958 CTAGE6Q86UF2 777 aa12.22□□□□□ -0.45
CPEB1-215ENST00000617958 CTAGE4Q8IX94 777 aa12.22□□□□□ -0.45
CPEB1-215ENST00000617958 NSUN7Q8NE18 718 aaKnown RBP12.22□□□□□ -0.45
CPEB1-215ENST00000617958 DDX54Q8TDD1 881 aaKnown RBP12.22□□□□□ -0.45
CPEB1-215ENST00000617958 PANX2Q96RD6 677 aa12.22□□□□□ -0.45
CPEB1-215ENST00000617958 POLR3EQ9NVU0 708 aa12.22□□□□□ -0.45
CPEB1-215ENST00000617958 SALL1Q9NSC2 1324 aa12.22□□□□□ -0.45
CPEB1-215ENST00000617958 ZC3H4Q9UPT8 1303 aaKnown RBP12.22□□□□□ -0.45
CPEB1-215ENST00000617958 PHLPP1O60346 1717 aa12.22□□□□□ -0.45
CPEB1-215ENST00000617958 GCFC2P16383 781 aaKnown RBP12.21□□□□□ -0.45
CPEB1-215ENST00000617958 CEBPZQ03701 1054 aaKnown RBP12.21□□□□□ -0.45
CPEB1-215ENST00000617958 PLCB4Q15147 1175 aa12.21□□□□□ -0.45
CPEB1-215ENST00000617958 LINC00301Q8NCQ3 95 aa12.21□□□□□ -0.45
CPEB1-215ENST00000617958 DPF2Q92785 391 aa12.21□□□□□ -0.45
CPEB1-215ENST00000617958 VEZTQ9HBM0 779 aa12.21□□□□□ -0.45
CPEB1-215ENST00000617958 SRCAPQ6ZRS2 3230 aa12.21□□□□□ -0.45
CPEB1-215ENST00000617958 CTAGE9A4FU28 777 aa12.21□□□□□ -0.46
CPEB1-215ENST00000617958 IRAK1P51617 712 aa12.21□□□□□ -0.46
CPEB1-215ENST00000617958 STK3Q13188 491 aa12.21□□□□□ -0.46
CPEB1-215ENST00000617958 NMIQ13287 307 aaPredicted RBP12.21□□□□□ -0.46
CPEB1-215ENST00000617958 FBXW10Q5XX13 1052 aa12.21□□□□□ -0.46
CPEB1-215ENST00000617958 SPECC1LQ69YQ0 1117 aa12.21□□□□□ -0.46
CPEB1-215ENST00000617958 TEX11Q8IYF3 940 aa12.21□□□□□ -0.46
CPEB1-215ENST00000617958 FAM76AQ8TAV0 307 aa12.21□□□□□ -0.46
CPEB1-215ENST00000617958 FAXDC2Q96IV6 333 aa12.21□□□□□ -0.46
CPEB1-215ENST00000617958 CLIC6Q96NY7 704 aa12.21□□□□□ -0.46
CPEB1-215ENST00000617958 SUGCTQ9HAC7 445 aa12.21□□□□□ -0.46
CPEB1-215ENST00000617958 HPCAL4Q9UM19 191 aa12.21□□□□□ -0.46
CPEB1-215ENST00000617958 KAT6BQ8WYB5 2073 aa12.21□□□□□ -0.46
CPEB1-215ENST00000617958 TARSL2A2RTX5 802 aaKnown RBP12.2□□□□□ -0.46
CPEB1-215ENST00000617958 PRAMEF22A3QJZ6 481 aa12.2□□□□□ -0.46
CPEB1-215ENST00000617958 GOLIM4O00461 696 aa12.2□□□□□ -0.46
CPEB1-215ENST00000617958 CYP27B1O15528 508 aa12.2□□□□□ -0.46
CPEB1-215ENST00000617958 RDXP35241 583 aaKnown RBP12.2□□□□□ -0.46
CPEB1-215ENST00000617958 SLC39A6Q13433 755 aa12.2□□□□□ -0.46
CPEB1-215ENST00000617958 IGSF22Q8N9C0 903 aa12.2□□□□□ -0.46
CPEB1-215ENST00000617958 BABAM1Q9NWV8 329 aa12.2□□□□□ -0.46
CPEB1-215ENST00000617958 COL16A1Q07092 1604 aaPredicted RBP12.2□□□□□ -0.46
CPEB1-215ENST00000617958 NCAPD2Q15021 1401 aa12.2□□□□□ -0.46
CPEB1-215ENST00000617958 COL5A2P05997 1499 aaPredicted RBP12.2□□□□□ -0.46
CPEB1-215ENST00000617958 PATL2C9JE40 543 aaKnown RBP12.2□□□□□ -0.46
CPEB1-215ENST00000617958 ZNF202O95125 648 aa12.2□□□□□ -0.46
CPEB1-215ENST00000617958 CMA1P23946 247 aa12.2□□□□□ -0.46
CPEB1-215ENST00000617958 ARHGAP25P42331 645 aa12.2□□□□□ -0.46
CPEB1-215ENST00000617958 CCT5P48643 541 aa12.2□□□□□ -0.46
CPEB1-215ENST00000617958 RAPGEF4Q8WZA2 1011 aa12.2□□□□□ -0.46
CPEB1-215ENST00000617958 NEK1Q96PY6 1258 aa12.2□□□□□ -0.46
CPEB1-215ENST00000617958 FTOQ9C0B1 505 aaKnown RBP eCLIP12.2□□□□□ -0.46
CPEB1-215ENST00000617958 CCDC9Q9Y3X0 531 aaKnown RBP12.2□□□□□ -0.46
CPEB1-215ENST00000617958 RFX7Q2KHR2 1363 aa12.2□□□□□ -0.46
CPEB1-215ENST00000617958 ABCA3Q99758 1704 aa12.2□□□□□ -0.46
CPEB1-215ENST00000617958 A0A1B0GVL5 298 aa12.19□□□□□ -0.46
CPEB1-215ENST00000617958 GNAT3A8MTJ3 354 aa12.19□□□□□ -0.46
CPEB1-215ENST00000617958 EIF3HO15372 352 aaKnown RBP eCLIP12.19□□□□□ -0.46
CPEB1-215ENST00000617958 PHACTR2O75167 634 aa12.19□□□□□ -0.46
CPEB1-215ENST00000617958 HMGB1P09429 215 aaKnown RBP12.19□□□□□ -0.46
CPEB1-215ENST00000617958 FAM182BQ5T319 152 aa12.19□□□□□ -0.46
CPEB1-215ENST00000617958 ILDR1Q86SU0 546 aaPredicted RBP12.19□□□□□ -0.46
CPEB1-215ENST00000617958 ELOA2Q8IYF1 753 aaPredicted RBP12.19□□□□□ -0.46
CPEB1-215ENST00000617958 MAGEC3Q8TD91 643 aa12.19□□□□□ -0.46
CPEB1-215ENST00000617958 COG1Q8WTW3 980 aa12.19□□□□□ -0.46
CPEB1-215ENST00000617958 INTS13Q9NVM9 706 aa12.19□□□□□ -0.46
CPEB1-215ENST00000617958 BSDC1Q9NW68 430 aaPredicted RBP12.19□□□□□ -0.46
CPEB1-215ENST00000617958 PUF60Q9UHX1 559 aaKnown RBP12.19□□□□□ -0.46
CPEB1-215ENST00000617958 KLHL33A6NCF5 533 aa12.19□□□□□ -0.46
CPEB1-215ENST00000617958 ZEB2O60315 1214 aa12.19□□□□□ -0.46
CPEB1-215ENST00000617958 COL9A3Q14050 684 aaPredicted RBP12.19□□□□□ -0.46
CPEB1-215ENST00000617958 FMNL2Q96PY5 1086 aa12.19□□□□□ -0.46
CPEB1-215ENST00000617958 JPH2Q9BR39 696 aaPredicted RBP12.19□□□□□ -0.46
CPEB1-215ENST00000617958 MRPL44Q9H9J2 332 aaKnown RBP12.19□□□□□ -0.46
CPEB1-215ENST00000617958 ADGRG1Q9Y653 693 aa12.19□□□□□ -0.46
CPEB1-215ENST00000617958 FAM237AA0A1B0GTK4 181 aa12.18□□□□□ -0.46
CPEB1-215ENST00000617958 CPDO75976 1380 aa12.18□□□□□ -0.46
CPEB1-215ENST00000617958 NF2P35240 595 aa12.18□□□□□ -0.46
CPEB1-215ENST00000617958 WWC2Q6AWC2 1192 aa12.18□□□□□ -0.46
CPEB1-215ENST00000617958 WDR17Q8IZU2 1322 aa12.18□□□□□ -0.46
CPEB1-215ENST00000617958 CCDC148Q8NFR7 591 aa12.18□□□□□ -0.46
CPEB1-215ENST00000617958 ZKSCAN4Q969J2 545 aaPredicted RBP12.18□□□□□ -0.46
CPEB1-215ENST00000617958 SGSM3Q96HU1 749 aa12.18□□□□□ -0.46
CPEB1-215ENST00000617958 AGXT2Q9BYV1 514 aa12.18□□□□□ -0.46
CPEB1-215ENST00000617958 PLEKHA4Q9H4M7 779 aa12.18□□□□□ -0.46
CPEB1-215ENST00000617958 GGA2Q9UJY4 613 aa12.18□□□□□ -0.46
CPEB1-215ENST00000617958 TMEM232C9JQI7 657 aa12.18□□□□□ -0.46
CPEB1-215ENST00000617958 PPP2R5AQ15172 486 aa12.18□□□□□ -0.46
CPEB1-215ENST00000617958 CPLX2Q6PUV4 134 aaKnown RBP12.18□□□□□ -0.46
CPEB1-215ENST00000617958 RASGRP2Q7LDG7 609 aa12.18□□□□□ -0.46
CPEB1-215ENST00000617958 FBXW7Q969H0 707 aa12.18□□□□□ -0.46
CPEB1-215ENST00000617958 RPGRIP1Q96KN7 1286 aa12.18□□□□□ -0.46
CPEB1-215ENST00000617958 FAM227BQ96M60 508 aa12.18□□□□□ -0.46
CPEB1-215ENST00000617958 TCEANC2Q96MN5 208 aa12.18□□□□□ -0.46
CPEB1-215ENST00000617958 KAT14Q9H8E8 782 aa12.18□□□□□ -0.46
CPEB1-215ENST00000617958 TTF2Q9UNY4 1162 aaKnown RBP12.18□□□□□ -0.46
CPEB1-215ENST00000617958 A0A0G2JS52 829 aa12.18□□□□□ -0.46
CPEB1-215ENST00000617958 PTPDC1A2A3K4 754 aa12.18□□□□□ -0.46
CPEB1-215ENST00000617958 ANXA1P04083 346 aa12.18□□□□□ -0.46
CPEB1-215ENST00000617958 HSP90B1P14625 803 aaKnown RBP12.18□□□□□ -0.46
CPEB1-215ENST00000617958 FECHP22830 423 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms