RNA–Protein interactions for RNA: ENST00000617930.1

CNOT3-209, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,047 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-209ENST00000617930 SEMA3EO15041 775 aa20.51■□□□□ 0.87
CNOT3-209ENST00000617930 ATP2B4P23634 1241 aa20.51■□□□□ 0.87
CNOT3-209ENST00000617930 TDO2P48775 406 aa20.51■□□□□ 0.87
CNOT3-209ENST00000617930 OTUD7BQ6GQQ9 843 aa20.51■□□□□ 0.87
CNOT3-209ENST00000617930 NAA16Q6N069 864 aaPredicted RBP20.51■□□□□ 0.87
CNOT3-209ENST00000617930 TDRD7Q8NHU6 1098 aaKnown RBP20.51■□□□□ 0.87
CNOT3-209ENST00000617930 TIAM2Q8IVF5 1701 aa20.51■□□□□ 0.87
CNOT3-209ENST00000617930 H3BQV1 296 aa20.51■□□□□ 0.87
CNOT3-209ENST00000617930 CDC27P30260 824 aa20.51■□□□□ 0.87
CNOT3-209ENST00000617930 IFFO2Q5TF58 517 aa20.51■□□□□ 0.87
CNOT3-209ENST00000617930 STAG1Q8WVM7 1258 aa20.51■□□□□ 0.87
CNOT3-209ENST00000617930 FAM217BQ9NTX9 383 aaPredicted RBP20.51■□□□□ 0.87
CNOT3-209ENST00000617930 ZBTB7AO95365 584 aa20.5■□□□□ 0.87
CNOT3-209ENST00000617930 APOA5Q6Q788 366 aa20.5■□□□□ 0.87
CNOT3-209ENST00000617930 LEO1Q8WVC0 666 aaPredicted RBP20.5■□□□□ 0.87
CNOT3-209ENST00000617930 UPF1Q92900 1129 aaKnown RBP eCLIP20.5■□□□□ 0.87
CNOT3-209ENST00000617930 FTOQ9C0B1 505 aaKnown RBP eCLIP20.5■□□□□ 0.87
CNOT3-209ENST00000617930 PDS5AQ29RF7 1337 aaKnown RBP20.5■□□□□ 0.87
CNOT3-209ENST00000617930 SNED1Q8TER0 1413 aa20.49■□□□□ 0.87
CNOT3-209ENST00000617930 CYP2D7A0A087X1C5 515 aa20.49■□□□□ 0.87
CNOT3-209ENST00000617930 MYL10Q9BUA6 226 aa20.49■□□□□ 0.87
CNOT3-209ENST00000617930 ELP1O95163 1332 aa20.49■□□□□ 0.87
CNOT3-209ENST00000617930 PPARAQ07869 468 aa20.49■□□□□ 0.87
CNOT3-209ENST00000617930 PGBD1Q96JS3 809 aa20.49■□□□□ 0.87
CNOT3-209ENST00000617930 NACAP1Q9BZK3 213 aa20.49■□□□□ 0.87
CNOT3-209ENST00000617930 CD209Q9NNX6 404 aa20.49■□□□□ 0.87
CNOT3-209ENST00000617930 DLEC1Q9Y238 1755 aa20.49■□□□□ 0.87
CNOT3-209ENST00000617930 KIAA1551Q9HCM1 1747 aa20.49■□□□□ 0.87
CNOT3-209ENST00000617930 ZBTB22O15209 634 aa20.48■□□□□ 0.87
CNOT3-209ENST00000617930 ALDH1B1P30837 517 aa20.48■□□□□ 0.87
CNOT3-209ENST00000617930 MFSD6Q6ZSS7 791 aa20.48■□□□□ 0.87
CNOT3-209ENST00000617930 SGMS1Q86VZ5 419 aa20.48■□□□□ 0.87
CNOT3-209ENST00000617930 ZSCAN30Q86W11 494 aa20.48■□□□□ 0.87
CNOT3-209ENST00000617930 TMEM87BQ96K49 555 aa20.48■□□□□ 0.87
CNOT3-209ENST00000617930 ZKSCAN3Q9BRR0 538 aa20.48■□□□□ 0.87
CNOT3-209ENST00000617930 H0YIN7 160 aa20.48■□□□□ 0.87
CNOT3-209ENST00000617930 MSNP26038 577 aaKnown RBP20.48■□□□□ 0.87
CNOT3-209ENST00000617930 STYK1Q6J9G0 422 aa20.48■□□□□ 0.87
CNOT3-209ENST00000617930 CCDC144CPQ8IYA2 1237 aa20.48■□□□□ 0.87
CNOT3-209ENST00000617930 C7orf43Q8WVR3 580 aa20.48■□□□□ 0.87
CNOT3-209ENST00000617930 ZSCAN16Q9H4T2 348 aaPredicted RBP20.48■□□□□ 0.87
CNOT3-209ENST00000617930 ZNF219Q9P2Y4 722 aaPredicted RBP20.48■□□□□ 0.87
CNOT3-209ENST00000617930 KIF13BQ9NQT8 1826 aa20.47■□□□□ 0.87
CNOT3-209ENST00000617930 MAST2Q6P0Q8 1798 aa20.47■□□□□ 0.87
CNOT3-209ENST00000617930 UBE2Q2LH0YL09 131 aa20.47■□□□□ 0.87
CNOT3-209ENST00000617930 C6orf229H3BNL8 230 aa20.47■□□□□ 0.87
CNOT3-209ENST00000617930 LIG1P18858 919 aa20.47■□□□□ 0.87
CNOT3-209ENST00000617930 NTRK3Q16288 839 aa20.47■□□□□ 0.87
CNOT3-209ENST00000617930 TMEM67Q5HYA8 995 aa20.47■□□□□ 0.87
CNOT3-209ENST00000617930 RRP12Q5JTH9 1297 aaKnown RBP20.47■□□□□ 0.87
CNOT3-209ENST00000617930 TMC4Q7Z404 712 aa20.47■□□□□ 0.87
CNOT3-209ENST00000617930 AIFM3Q96NN9 605 aa20.47■□□□□ 0.87
CNOT3-209ENST00000617930 ANAPC4Q9UJX5 808 aa20.47■□□□□ 0.87
CNOT3-209ENST00000617930 MINDY4BA8MYZ0 360 aa20.46■□□□□ 0.87
CNOT3-209ENST00000617930 RIMBP2O15034 1052 aa20.46■□□□□ 0.87
CNOT3-209ENST00000617930 CCDC183Q5T5S1 534 aa20.46■□□□□ 0.87
CNOT3-209ENST00000617930 SLC16A10Q8TF71 515 aa20.46■□□□□ 0.87
CNOT3-209ENST00000617930 SYAP1Q96A49 352 aaPredicted RBP20.46■□□□□ 0.87
CNOT3-209ENST00000617930 SPATA32Q96LK8 384 aa20.46■□□□□ 0.87
CNOT3-209ENST00000617930 ORC3Q9UBD5 711 aaPredicted RBP20.46■□□□□ 0.87
CNOT3-209ENST00000617930 IL1R1P14778 569 aa20.46■□□□□ 0.87
CNOT3-209ENST00000617930 KCNA3P22001 575 aa20.46■□□□□ 0.87
CNOT3-209ENST00000617930 LIFRP42702 1097 aa20.46■□□□□ 0.87
CNOT3-209ENST00000617930 SCAND2PQ9GZW5 306 aaPredicted RBP20.46■□□□□ 0.87
CNOT3-209ENST00000617930 AATFQ9NY61 560 aaKnown RBP eCLIP20.46■□□□□ 0.87
CNOT3-209ENST00000617930 ATF5Q9Y2D1 282 aaPredicted RBP20.46■□□□□ 0.87
CNOT3-209ENST00000617930 IFIT3O14879 490 aaKnown RBP20.45■□□□□ 0.86
CNOT3-209ENST00000617930 METAP2P50579 478 aaKnown RBP eCLIP20.45■□□□□ 0.86
CNOT3-209ENST00000617930 R3HDM1Q15032 1099 aaKnown RBP20.45■□□□□ 0.86
CNOT3-209ENST00000617930 CSPP1Q1MSJ5 1256 aa20.45■□□□□ 0.86
CNOT3-209ENST00000617930 CTR9Q6PD62 1173 aa20.45■□□□□ 0.86
CNOT3-209ENST00000617930 ZNF804AQ7Z570 1209 aa20.45■□□□□ 0.86
CNOT3-209ENST00000617930 MICU3Q86XE3 530 aa20.45■□□□□ 0.86
CNOT3-209ENST00000617930 MPNDQ8N594 471 aa20.45■□□□□ 0.86
CNOT3-209ENST00000617930 KRT23Q9C075 422 aa20.45■□□□□ 0.86
CNOT3-209ENST00000617930 CNNM2Q9H8M5 875 aa20.45■□□□□ 0.86
CNOT3-209ENST00000617930 RANBP6O60518 1105 aaKnown RBP20.44■□□□□ 0.86
CNOT3-209ENST00000617930 CEBPZQ03701 1054 aaKnown RBP20.44■□□□□ 0.86
CNOT3-209ENST00000617930 PHKBQ93100 1093 aa20.44■□□□□ 0.86
CNOT3-209ENST00000617930 CCDC88AQ3V6T2 1871 aa20.44■□□□□ 0.86
CNOT3-209ENST00000617930 FBXO18Q8NFZ0 1043 aa20.44■□□□□ 0.86
CNOT3-209ENST00000617930 USP28Q96RU2 1077 aa20.44■□□□□ 0.86
CNOT3-209ENST00000617930 DHX16O60231 1041 aaKnown RBP20.43■□□□□ 0.86
CNOT3-209ENST00000617930 RNF214Q8ND24 703 aa20.43■□□□□ 0.86
CNOT3-209ENST00000617930 KIF28PB7ZC32 967 aa20.43■□□□□ 0.86
CNOT3-209ENST00000617930 CPLX1O14810 134 aa20.43■□□□□ 0.86
CNOT3-209ENST00000617930 ZBTB43O43298 467 aa20.43■□□□□ 0.86
CNOT3-209ENST00000617930 HS1BP3Q53T59 392 aa20.43■□□□□ 0.86
CNOT3-209ENST00000617930 GIMAP6Q6P9H5 292 aa20.43■□□□□ 0.86
CNOT3-209ENST00000617930 DPP8Q6V1X1 898 aaPredicted RBP20.43■□□□□ 0.86
CNOT3-209ENST00000617930 FUCA2Q9BTY2 467 aa20.43■□□□□ 0.86
CNOT3-209ENST00000617930 DCP1AQ9NPI6 582 aaPredicted RBP20.43■□□□□ 0.86
CNOT3-209ENST00000617930 TOMM22Q9NS69 142 aa20.43■□□□□ 0.86
CNOT3-209ENST00000617930 ZNF646O15015 1829 aaPredicted RBP20.42■□□□□ 0.86
CNOT3-209ENST00000617930 USP17L12C9JPN9 530 aa20.42■□□□□ 0.86
CNOT3-209ENST00000617930 USP17L21D6R901 530 aa20.42■□□□□ 0.86
CNOT3-209ENST00000617930 FGRP09769 529 aa20.42■□□□□ 0.86
CNOT3-209ENST00000617930 DPEP1P16444 411 aa20.42■□□□□ 0.86
CNOT3-209ENST00000617930 NFXL1Q6ZNB6 911 aa20.42■□□□□ 0.86
CNOT3-209ENST00000617930 C8orf76Q96K31 380 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms