RNA–Protein interactions for RNA: ENST00000617489.1

MALAT1-210, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 2 BASIC

Gene MALAT1, Length 318 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-210ENST00000617489 CD8BP10966 210 aa6.79□□□□□ -1.32
MALAT1-210ENST00000617489 NPR3P17342 541 aa6.79□□□□□ -1.32
MALAT1-210ENST00000617489 SSFA2P28290 1259 aa6.79□□□□□ -1.32
MALAT1-210ENST00000617489 SF3B2Q13435 895 aaKnown RBP6.79□□□□□ -1.32
MALAT1-210ENST00000617489 ATG4DQ86TL0 474 aaPredicted RBP6.79□□□□□ -1.32
MALAT1-210ENST00000617489 GALNT12Q8IXK2 581 aa6.79□□□□□ -1.32
MALAT1-210ENST00000617489 PLD6Q8N2A8 252 aaKnown RBP6.79□□□□□ -1.32
MALAT1-210ENST00000617489 SLC38A3Q99624 504 aa6.79□□□□□ -1.32
MALAT1-210ENST00000617489 TRIM56Q9BRZ2 755 aaKnown RBP6.79□□□□□ -1.32
MALAT1-210ENST00000617489 GSX1Q9H4S2 264 aaPredicted RBP6.79□□□□□ -1.32
MALAT1-210ENST00000617489 ANO2Q9NQ90 1003 aa6.79□□□□□ -1.32
MALAT1-210ENST00000617489 PPP1R9AQ9ULJ8 1098 aa6.79□□□□□ -1.32
MALAT1-210ENST00000617489 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.79□□□□□ -1.32
MALAT1-210ENST00000617489 LOC105371045A0A1W2PR82 267 aa6.78□□□□□ -1.32
MALAT1-210ENST00000617489 B3GALT4O96024 378 aa6.78□□□□□ -1.32
MALAT1-210ENST00000617489 SLFN14P0C7P3 912 aa6.78□□□□□ -1.32
MALAT1-210ENST00000617489 FUT4P22083 530 aa6.78□□□□□ -1.32
MALAT1-210ENST00000617489 CDK5R2Q13319 367 aa6.78□□□□□ -1.32
MALAT1-210ENST00000617489 GJD3Q8N144 294 aa6.78□□□□□ -1.32
MALAT1-210ENST00000617489 FAM181AQ8N9Y4 354 aa6.78□□□□□ -1.32
MALAT1-210ENST00000617489 WDR18Q9BV38 432 aa6.78□□□□□ -1.32
MALAT1-210ENST00000617489 EHD4Q9H223 541 aa6.78□□□□□ -1.32
MALAT1-210ENST00000617489 ARAP1Q96P48 1450 aa6.78□□□□□ -1.32
MALAT1-210ENST00000617489 SHROOM2Q13796 1616 aa6.77□□□□□ -1.33
MALAT1-210ENST00000617489 NEFLP07196 543 aa6.77□□□□□ -1.33
MALAT1-210ENST00000617489 RNASE1P07998 156 aaKnown RBP6.77□□□□□ -1.33
MALAT1-210ENST00000617489 LIG1P18858 919 aa6.77□□□□□ -1.33
MALAT1-210ENST00000617489 TMEM40Q8WWA1 233 aa6.77□□□□□ -1.33
MALAT1-210ENST00000617489 KRTAP4-9Q9BYQ8 210 aa6.77□□□□□ -1.33
MALAT1-210ENST00000617489 ZC3H12CQ9C0D7 883 aaKnown RBP6.77□□□□□ -1.33
MALAT1-210ENST00000617489 VAV3Q9UKW4 847 aa6.77□□□□□ -1.33
MALAT1-210ENST00000617489 UGGT2Q9NYU1 1516 aa6.76□□□□□ -1.33
MALAT1-210ENST00000617489 KIF21BO75037 1637 aa6.76□□□□□ -1.33
MALAT1-210ENST00000617489 RNGTTO60942 597 aaKnown RBP6.76□□□□□ -1.33
MALAT1-210ENST00000617489 AP3B2Q13367 1082 aa6.76□□□□□ -1.33
MALAT1-210ENST00000617489 FBLN7Q53RD9 439 aa6.76□□□□□ -1.33
MALAT1-210ENST00000617489 GLIS3Q8NEA6 775 aa6.76□□□□□ -1.33
MALAT1-210ENST00000617489 ZNF576Q9H609 170 aa6.76□□□□□ -1.33
MALAT1-210ENST00000617489 MBNL3Q9NUK0 354 aaKnown RBP6.76□□□□□ -1.33
MALAT1-210ENST00000617489 CDK11AQ9UQ88 783 aaPredicted RBP6.76□□□□□ -1.33
MALAT1-210ENST00000617489 CTTNBP2Q8WZ74 1663 aa6.76□□□□□ -1.33
MALAT1-210ENST00000617489 PLEKHD1A6NEE1 506 aa6.75□□□□□ -1.33
MALAT1-210ENST00000617489 CD96P40200 585 aa6.75□□□□□ -1.33
MALAT1-210ENST00000617489 PRKCQQ04759 706 aa6.75□□□□□ -1.33
MALAT1-210ENST00000617489 AOC3Q16853 763 aa6.75□□□□□ -1.33
MALAT1-210ENST00000617489 KIAA0319Q5VV43 1072 aa6.75□□□□□ -1.33
MALAT1-210ENST00000617489 USPL1Q5W0Q7 1092 aa6.75□□□□□ -1.33
MALAT1-210ENST00000617489 WFDC3Q8IUB2 231 aa6.75□□□□□ -1.33
MALAT1-210ENST00000617489 ATXN3LQ9H3M9 355 aa6.75□□□□□ -1.33
MALAT1-210ENST00000617489 UACAQ9BZF9 1416 aa6.75□□□□□ -1.33
MALAT1-210ENST00000617489 ERCC6L2Q5T890 1561 aa6.74□□□□□ -1.33
MALAT1-210ENST00000617489 TMPRSS2O15393 492 aa6.74□□□□□ -1.33
MALAT1-210ENST00000617489 ZNF157P51786 506 aaPredicted RBP6.74□□□□□ -1.33
MALAT1-210ENST00000617489 HNRNPUQ00839 825 aaKnown RBP eCLIP6.74□□□□□ -1.33
MALAT1-210ENST00000617489 ZNF211Q13398 564 aaPredicted RBP6.74□□□□□ -1.33
MALAT1-210ENST00000617489 SMYD4Q8IYR2 804 aaPredicted RBP6.74□□□□□ -1.33
MALAT1-210ENST00000617489 SSU72Q9NP77 194 aaKnown RBP6.74□□□□□ -1.33
MALAT1-210ENST00000617489 CRIM1Q9NZV1 1036 aa6.74□□□□□ -1.33
MALAT1-210ENST00000617489 BRPF3Q9ULD4 1205 aa6.74□□□□□ -1.33
MALAT1-210ENST00000617489 SYNGAP1Q96PV0 1343 aa6.74□□□□□ -1.33
MALAT1-210ENST00000617489 ID3Q02535 119 aa6.73□□□□□ -1.33
MALAT1-210ENST00000617489 IFI16Q16666 785 aaKnown RBP6.73□□□□□ -1.33
MALAT1-210ENST00000617489 LRRN4CLQ8ND94 238 aa6.73□□□□□ -1.33
MALAT1-210ENST00000617489 WDR89Q96FK6 387 aaPredicted RBP6.73□□□□□ -1.33
MALAT1-210ENST00000617489 HRASLS5Q96KN8 279 aa6.73□□□□□ -1.33
MALAT1-210ENST00000617489 FANCD2OSQ96PS1 177 aa6.73□□□□□ -1.33
MALAT1-210ENST00000617489 CCDC86Q9H6F5 360 aaKnown RBP6.73□□□□□ -1.33
MALAT1-210ENST00000617489 ADAMTS6Q9UKP5 1117 aa6.73□□□□□ -1.33
MALAT1-210ENST00000617489 DISP1Q96F81 1524 aa6.72□□□□□ -1.33
MALAT1-210ENST00000617489 TMEM265A0A087WTH1 108 aa6.72□□□□□ -1.33
MALAT1-210ENST00000617489 ARID3CA6NKF2 412 aa6.72□□□□□ -1.33
MALAT1-210ENST00000617489 ITPKAP23677 461 aa6.72□□□□□ -1.33
MALAT1-210ENST00000617489 ANGEL2Q5VTE6 544 aaKnown RBP6.72□□□□□ -1.33
MALAT1-210ENST00000617489 FMN1Q68DA7 1419 aa6.71□□□□□ -1.34
MALAT1-210ENST00000617489 LRRC10BA6NIK2 292 aa6.71□□□□□ -1.34
MALAT1-210ENST00000617489 TMEM88BA6NKF7 163 aa6.71□□□□□ -1.34
MALAT1-210ENST00000617489 CPNE3O75131 537 aaKnown RBP6.71□□□□□ -1.34
MALAT1-210ENST00000617489 GADD45BO75293 160 aaPredicted RBP6.71□□□□□ -1.34
MALAT1-210ENST00000617489 LEFTY1O75610 366 aa6.71□□□□□ -1.34
MALAT1-210ENST00000617489 HCLS1P14317 486 aaPredicted RBP6.71□□□□□ -1.34
MALAT1-210ENST00000617489 TTLL4Q14679 1199 aa6.71□□□□□ -1.34
MALAT1-210ENST00000617489 FAM84AQ96KN4 292 aa6.71□□□□□ -1.34
MALAT1-210ENST00000617489 NPHS2Q9NP85 383 aa6.71□□□□□ -1.34
MALAT1-210ENST00000617489 DISC1Q9NRI5 854 aa6.71□□□□□ -1.34
MALAT1-210ENST00000617489 PCOLCE2Q9UKZ9 415 aa6.71□□□□□ -1.34
MALAT1-210ENST00000617489 KIAA0556O60303 1618 aa6.71□□□□□ -1.34
MALAT1-210ENST00000617489 CEACAM5P06731 702 aa6.7□□□□□ -1.34
MALAT1-210ENST00000617489 ITIH2P19823 946 aa6.7□□□□□ -1.34
MALAT1-210ENST00000617489 SPOCD1Q6ZMY3 1216 aa6.7□□□□□ -1.34
MALAT1-210ENST00000617489 DUSP23Q9BVJ7 150 aa6.7□□□□□ -1.34
MALAT1-210ENST00000617489 MKNK2Q9HBH9 465 aa6.7□□□□□ -1.34
MALAT1-210ENST00000617489 UHRF1BP1LA0JNW5 1464 aa6.7□□□□□ -1.34
MALAT1-210ENST00000617489 OXCT1P55809 520 aa6.69□□□□□ -1.34
MALAT1-210ENST00000617489 PTPN12Q05209 780 aaKnown RBP6.69□□□□□ -1.34
MALAT1-210ENST00000617489 LCE4AQ5TA78 99 aa6.69□□□□□ -1.34
MALAT1-210ENST00000617489 SLC23A3Q6PIS1 610 aa6.69□□□□□ -1.34
MALAT1-210ENST00000617489 KCNB2Q92953 911 aa6.69□□□□□ -1.34
MALAT1-210ENST00000617489 FAM53CQ9NYF3 392 aa6.69□□□□□ -1.34
MALAT1-210ENST00000617489 EFCAB5A4FU69 1503 aa6.69□□□□□ -1.34
MALAT1-210ENST00000617489 CLIP1P30622 1438 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms