RNA–Protein interactions for RNA: ENST00000617103.4

CLTCL1-209, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,859 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-209ENST00000617103 VCXQ9H320 206 aa11.92□□□□□ -0.5
CLTCL1-209ENST00000617103 PYCARDQ9ULZ3 195 aa11.92□□□□□ -0.5
CLTCL1-209ENST00000617103 IBTKQ9P2D0 1353 aaPredicted RBP11.92□□□□□ -0.5
CLTCL1-209ENST00000617103 UGGT2Q9NYU1 1516 aa11.92□□□□□ -0.5
CLTCL1-209ENST00000617103 EIF2AK4Q9P2K8 1649 aaKnown RBP11.92□□□□□ -0.5
CLTCL1-209ENST00000617103 GNGT1P63211 74 aa11.92□□□□□ -0.5
CLTCL1-209ENST00000617103 TAB2Q9NYJ8 693 aa11.92□□□□□ -0.5
CLTCL1-209ENST00000617103 HDAC9Q9UKV0 1011 aa11.92□□□□□ -0.5
CLTCL1-209ENST00000617103 IQSEC3Q9UPP2 1182 aaPredicted RBP11.92□□□□□ -0.5
CLTCL1-209ENST00000617103 MAPK8IP1Q9UQF2 711 aa11.92□□□□□ -0.5
CLTCL1-209ENST00000617103 JAK2O60674 1132 aa11.91□□□□□ -0.5
CLTCL1-209ENST00000617103 FAM13AO94988 1023 aa11.91□□□□□ -0.5
CLTCL1-209ENST00000617103 TNNI2P48788 182 aa11.91□□□□□ -0.5
CLTCL1-209ENST00000617103 APBB1IPQ7Z5R6 666 aaPredicted RBP11.91□□□□□ -0.5
CLTCL1-209ENST00000617103 MIPOL1Q8TD10 442 aa11.91□□□□□ -0.5
CLTCL1-209ENST00000617103 RPGRQ92834 1020 aaKnown RBP11.91□□□□□ -0.5
CLTCL1-209ENST00000617103 C6orf229H3BNL8 230 aa11.91□□□□□ -0.5
CLTCL1-209ENST00000617103 MAP7D1Q3KQU3 841 aa11.91□□□□□ -0.5
CLTCL1-209ENST00000617103 LONRF3Q496Y0 759 aa11.91□□□□□ -0.5
CLTCL1-209ENST00000617103 CEP85LQ5SZL2 805 aa11.91□□□□□ -0.5
CLTCL1-209ENST00000617103 IMPG2Q9BZV3 1241 aa11.91□□□□□ -0.5
CLTCL1-209ENST00000617103 SSH2Q76I76 1423 aa11.91□□□□□ -0.5
CLTCL1-209ENST00000617103 ADKP55263 362 aaKnown RBP11.91□□□□□ -0.5
CLTCL1-209ENST00000617103 FAM71BQ8TC56 605 aa11.91□□□□□ -0.5
CLTCL1-209ENST00000617103 BCAS4Q8TDM0 211 aa11.91□□□□□ -0.5
CLTCL1-209ENST00000617103 CSRNP2Q9H175 543 aa11.91□□□□□ -0.5
CLTCL1-209ENST00000617103 TRIM35Q9UPQ4 493 aa11.91□□□□□ -0.5
CLTCL1-209ENST00000617103 MTMR6Q9Y217 621 aa11.91□□□□□ -0.5
CLTCL1-209ENST00000617103 PPP2R2CQ9Y2T4 447 aa11.91□□□□□ -0.5
CLTCL1-209ENST00000617103 CEP104O60308 925 aa11.91□□□□□ -0.5
CLTCL1-209ENST00000617103 NR1I2O75469 434 aa11.91□□□□□ -0.5
CLTCL1-209ENST00000617103 GDAP1L1Q96MZ0 367 aa11.91□□□□□ -0.5
CLTCL1-209ENST00000617103 DDX41Q9UJV9 622 aaKnown RBP11.91□□□□□ -0.5
CLTCL1-209ENST00000617103 HMGB2P26583 209 aaKnown RBP11.9□□□□□ -0.5
CLTCL1-209ENST00000617103 ME3Q16798 604 aa11.9□□□□□ -0.5
CLTCL1-209ENST00000617103 KRT71Q3SY84 523 aa11.9□□□□□ -0.5
CLTCL1-209ENST00000617103 DCAF17Q5H9S7 520 aaPredicted RBP11.9□□□□□ -0.5
CLTCL1-209ENST00000617103 VCX3BQ9H321 246 aa11.9□□□□□ -0.5
CLTCL1-209ENST00000617103 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.9□□□□□ -0.5
CLTCL1-209ENST00000617103 FLT4P35916 1363 aa11.9□□□□□ -0.5
CLTCL1-209ENST00000617103 B4E1Z4 1266 aa11.9□□□□□ -0.5
CLTCL1-209ENST00000617103 SPOPO43791 374 aa11.9□□□□□ -0.5
CLTCL1-209ENST00000617103 GSPT1P15170 499 aaKnown RBP11.9□□□□□ -0.5
CLTCL1-209ENST00000617103 CCDC84Q86UT8 332 aaPredicted RBP11.9□□□□□ -0.5
CLTCL1-209ENST00000617103 KLHL7Q8IXQ5 586 aa11.9□□□□□ -0.5
CLTCL1-209ENST00000617103 MAGEB6Q8N7X4 407 aa11.9□□□□□ -0.5
CLTCL1-209ENST00000617103 RABGGTAQ92696 567 aa11.9□□□□□ -0.5
CLTCL1-209ENST00000617103 PPIP5K1Q6PFW1 1433 aa11.9□□□□□ -0.5
CLTCL1-209ENST00000617103 POGZQ7Z3K3 1410 aa11.9□□□□□ -0.5
CLTCL1-209ENST00000617103 KRT40Q6A162 431 aa11.9□□□□□ -0.5
CLTCL1-209ENST00000617103 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.9□□□□□ -0.5
CLTCL1-209ENST00000617103 MICAL1Q8TDZ2 1067 aa11.9□□□□□ -0.5
CLTCL1-209ENST00000617103 MCUR1Q96AQ8 359 aa11.9□□□□□ -0.5
CLTCL1-209ENST00000617103 TRIM31Q9BZY9 425 aa11.9□□□□□ -0.5
CLTCL1-209ENST00000617103 TXNDC16Q9P2K2 825 aa11.9□□□□□ -0.5
CLTCL1-209ENST00000617103 MAP3K5Q99683 1374 aa11.9□□□□□ -0.51
CLTCL1-209ENST00000617103 GOLGA8KD6RF30 607 aa11.89□□□□□ -0.51
CLTCL1-209ENST00000617103 CLGNO14967 610 aa11.89□□□□□ -0.51
CLTCL1-209ENST00000617103 INF2Q27J81 1249 aa11.89□□□□□ -0.51
CLTCL1-209ENST00000617103 ARHGAP24Q8N264 748 aa11.89□□□□□ -0.51
CLTCL1-209ENST00000617103 PSMB7Q99436 277 aa11.89□□□□□ -0.51
CLTCL1-209ENST00000617103 THOC2Q8NI27 1593 aaKnown RBP11.89□□□□□ -0.51
CLTCL1-209ENST00000617103 TNFAIP3P21580 790 aa11.89□□□□□ -0.51
CLTCL1-209ENST00000617103 LIG3P49916 1009 aa11.89□□□□□ -0.51
CLTCL1-209ENST00000617103 ASIC2Q16515 512 aa11.89□□□□□ -0.51
CLTCL1-209ENST00000617103 TNNI3KQ59H18 835 aa11.89□□□□□ -0.51
CLTCL1-209ENST00000617103 TRMT44Q8IYL2 757 aaKnown RBP11.89□□□□□ -0.51
CLTCL1-209ENST00000617103 CAPS2Q9BXY5 557 aa11.89□□□□□ -0.51
CLTCL1-209ENST00000617103 PLCB1Q9NQ66 1216 aa11.89□□□□□ -0.51
CLTCL1-209ENST00000617103 FPGT-TNNI3KV9GXZ4 949 aa11.89□□□□□ -0.51
CLTCL1-209ENST00000617103 PNMA6EA0A0J9YXQ4 647 aa11.89□□□□□ -0.51
CLTCL1-209ENST00000617103 OR8K1Q8NGG5 319 aa11.89□□□□□ -0.51
CLTCL1-209ENST00000617103 IQCDQ96DY2 449 aa11.89□□□□□ -0.51
CLTCL1-209ENST00000617103 PPANQ9NQ55 473 aaKnown RBP11.89□□□□□ -0.51
CLTCL1-209ENST00000617103 KIF24Q5T7B8 1368 aa11.89□□□□□ -0.51
CLTCL1-209ENST00000617103 NUTM2BA6NNL0 878 aaPredicted RBP11.89□□□□□ -0.51
CLTCL1-209ENST00000617103 NUTM2EB1AL46 878 aaPredicted RBP11.89□□□□□ -0.51
CLTCL1-209ENST00000617103 CHL1O00533 1208 aa11.89□□□□□ -0.51
CLTCL1-209ENST00000617103 KIF3CO14782 793 aa11.89□□□□□ -0.51
CLTCL1-209ENST00000617103 DTNBO60941 627 aa11.89□□□□□ -0.51
CLTCL1-209ENST00000617103 PSMC4P43686 418 aa11.89□□□□□ -0.51
CLTCL1-209ENST00000617103 RPS6KA1Q15418 735 aa11.89□□□□□ -0.51
CLTCL1-209ENST00000617103 CFAP157Q5JU67 520 aa11.89□□□□□ -0.51
CLTCL1-209ENST00000617103 MYSM1Q5VVJ2 828 aa11.89□□□□□ -0.51
CLTCL1-209ENST00000617103 MIGA1Q8NAN2 632 aa11.89□□□□□ -0.51
CLTCL1-209ENST00000617103 ARHGEF2Q92974 986 aaKnown RBP11.89□□□□□ -0.51
CLTCL1-209ENST00000617103 ANTXR1Q9H6X2 564 aa11.89□□□□□ -0.51
CLTCL1-209ENST00000617103 CD109Q6YHK3 1445 aa11.89□□□□□ -0.51
CLTCL1-209ENST00000617103 EPB41P11171 864 aaKnown RBP11.88□□□□□ -0.51
CLTCL1-209ENST00000617103 ZNF365Q70YC5 407 aa11.88□□□□□ -0.51
CLTCL1-209ENST00000617103 UBL4BQ8N7F7 174 aa11.88□□□□□ -0.51
CLTCL1-209ENST00000617103 KBTBD3Q8NAB2 608 aa11.88□□□□□ -0.51
CLTCL1-209ENST00000617103 SMARCC2Q8TAQ2 1214 aa11.88□□□□□ -0.51
CLTCL1-209ENST00000617103 ZKSCAN3Q9BRR0 538 aa11.88□□□□□ -0.51
CLTCL1-209ENST00000617103 DDX21Q9NR30 783 aaKnown RBP eCLIP11.88□□□□□ -0.51
CLTCL1-209ENST00000617103 ERCC5P28715 1186 aaPredicted RBP11.88□□□□□ -0.51
CLTCL1-209ENST00000617103 LETM2Q2VYF4 491 aa11.88□□□□□ -0.51
CLTCL1-209ENST00000617103 TTC38Q5R3I4 469 aa11.88□□□□□ -0.51
CLTCL1-209ENST00000617103 BEND3Q5T5X7 828 aa11.88□□□□□ -0.51
CLTCL1-209ENST00000617103 TTC6Q86TZ1 520 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms