RNA–Protein interactions for RNA: ENST00000616803.4

CBWD1-224, Transcript of COBW domain containing 1, humanhuman

TSL 5

Gene CBWD1, Length 499 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-224ENST00000616803 PPP4R2Q9NY27 417 aa6.33□□□□□ -1.4
CBWD1-224ENST00000616803 ZC3H7BQ9UGR2 993 aaKnown RBP6.33□□□□□ -1.4
CBWD1-224ENST00000616803 CNTNAP4Q9C0A0 1308 aa6.32□□□□□ -1.4
CBWD1-224ENST00000616803 DCDC2CA8MYV0 355 aa6.32□□□□□ -1.4
CBWD1-224ENST00000616803 PDIA4P13667 645 aaKnown RBP6.32□□□□□ -1.4
CBWD1-224ENST00000616803 FOSL1P15407 271 aa6.32□□□□□ -1.4
CBWD1-224ENST00000616803 GSTT1P30711 240 aa6.32□□□□□ -1.4
CBWD1-224ENST00000616803 RING1Q06587 406 aa6.32□□□□□ -1.4
CBWD1-224ENST00000616803 PPM1JQ5JR12 505 aa6.32□□□□□ -1.4
CBWD1-224ENST00000616803 MEI1Q5TIA1 1274 aa6.32□□□□□ -1.4
CBWD1-224ENST00000616803 DDX54Q8TDD1 881 aaKnown RBP6.32□□□□□ -1.4
CBWD1-224ENST00000616803 ISL2Q96A47 359 aa6.32□□□□□ -1.4
CBWD1-224ENST00000616803 OSBPL1AQ9BXW6 950 aa6.32□□□□□ -1.4
CBWD1-224ENST00000616803 CBX8Q9HC52 389 aa6.32□□□□□ -1.4
CBWD1-224ENST00000616803 KRT82Q9NSB4 513 aa6.32□□□□□ -1.4
CBWD1-224ENST00000616803 CTSHP09668 335 aa6.31□□□□□ -1.4
CBWD1-224ENST00000616803 GP2P55259 537 aaKnown RBP6.31□□□□□ -1.4
CBWD1-224ENST00000616803 PPP2R3AQ06190 1150 aa6.31□□□□□ -1.4
CBWD1-224ENST00000616803 ATG3Q9NT62 314 aa6.31□□□□□ -1.4
CBWD1-224ENST00000616803 LEMD3Q9Y2U8 911 aa6.31□□□□□ -1.4
CBWD1-224ENST00000616803 PCDHB5Q9Y5E4 795 aa6.31□□□□□ -1.4
CBWD1-224ENST00000616803 RNGTTO60942 597 aaKnown RBP6.3□□□□□ -1.4
CBWD1-224ENST00000616803 SLFN14P0C7P3 912 aa6.3□□□□□ -1.4
CBWD1-224ENST00000616803 TXKP42681 527 aa6.3□□□□□ -1.4
CBWD1-224ENST00000616803 MAP7Q14244 749 aa6.3□□□□□ -1.4
CBWD1-224ENST00000616803 PCNX4Q63HM2 1172 aa6.3□□□□□ -1.4
CBWD1-224ENST00000616803 OGFOD3Q6PK18 319 aa6.3□□□□□ -1.4
CBWD1-224ENST00000616803 FAM214BQ7L5A3 538 aa6.3□□□□□ -1.4
CBWD1-224ENST00000616803 FBXO33Q7Z6M2 555 aa6.3□□□□□ -1.4
CBWD1-224ENST00000616803 SMYD4Q8IYR2 804 aaPredicted RBP6.3□□□□□ -1.4
CBWD1-224ENST00000616803 FAM181AQ8N9Y4 354 aa6.3□□□□□ -1.4
CBWD1-224ENST00000616803 KRTAP4-7Q9BYR0 210 aa6.3□□□□□ -1.4
CBWD1-224ENST00000616803 GZF1Q9H116 711 aaPredicted RBP6.3□□□□□ -1.4
CBWD1-224ENST00000616803 LRRC4CQ9HCJ2 640 aa6.3□□□□□ -1.4
CBWD1-224ENST00000616803 CCDC39Q9UFE4 941 aa6.3□□□□□ -1.4
CBWD1-224ENST00000616803 PRPF40AO75400 957 aaKnown RBP6.29□□□□□ -1.4
CBWD1-224ENST00000616803 FAM87AP0C7U9 286 aa6.29□□□□□ -1.4
CBWD1-224ENST00000616803 GNA15P30679 374 aa6.29□□□□□ -1.4
CBWD1-224ENST00000616803 INTS5Q6P9B9 1019 aaKnown RBP6.29□□□□□ -1.4
CBWD1-224ENST00000616803 ANKRD24Q8TF21 1146 aa6.29□□□□□ -1.4
CBWD1-224ENST00000616803 GAL3ST3Q96A11 431 aa6.29□□□□□ -1.4
CBWD1-224ENST00000616803 PARP2Q9UGN5 583 aa6.29□□□□□ -1.4
CBWD1-224ENST00000616803 AK5Q9Y6K8 562 aa6.29□□□□□ -1.4
CBWD1-224ENST00000616803 F6X3S4 739 aa6.28□□□□□ -1.4
CBWD1-224ENST00000616803 CYP26A1O43174 497 aa6.28□□□□□ -1.4
CBWD1-224ENST00000616803 TAL1P17542 331 aaPredicted RBP6.28□□□□□ -1.4
CBWD1-224ENST00000616803 CD96P40200 585 aa6.28□□□□□ -1.4
CBWD1-224ENST00000616803 BNIP3Q12983 259 aa6.28□□□□□ -1.4
CBWD1-224ENST00000616803 MAP3K11Q16584 847 aa6.28□□□□□ -1.4
CBWD1-224ENST00000616803 LRFN4Q6PJG9 635 aa6.28□□□□□ -1.4
CBWD1-224ENST00000616803 SPRED2Q7Z698 418 aa6.28□□□□□ -1.4
CBWD1-224ENST00000616803 HEXIM2Q96MH2 286 aaKnown RBP6.28□□□□□ -1.4
CBWD1-224ENST00000616803 SRCIN1Q9C0H9 1055 aa6.28□□□□□ -1.4
CBWD1-224ENST00000616803 ATXN3LQ9H3M9 355 aa6.28□□□□□ -1.4
CBWD1-224ENST00000616803 ZFYVE1Q9HBF4 777 aa6.28□□□□□ -1.4
CBWD1-224ENST00000616803 FAM8A1Q9UBU6 413 aa6.28□□□□□ -1.4
CBWD1-224ENST00000616803 SPG7Q9UQ90 795 aa6.28□□□□□ -1.4
CBWD1-224ENST00000616803 GIPC1O14908 333 aa6.27□□□□□ -1.41
CBWD1-224ENST00000616803 EIF4EBP3O60516 100 aaPredicted RBP6.27□□□□□ -1.41
CBWD1-224ENST00000616803 EAPPQ56P03 285 aaPredicted RBP6.27□□□□□ -1.41
CBWD1-224ENST00000616803 HP1BP3Q5SSJ5 553 aaPredicted RBP6.27□□□□□ -1.41
CBWD1-224ENST00000616803 LCE1DQ5T752 114 aa6.27□□□□□ -1.41
CBWD1-224ENST00000616803 LLGL2Q6P1M3 1020 aa6.27□□□□□ -1.41
CBWD1-224ENST00000616803 ZNF574Q6ZN55 896 aaPredicted RBP6.27□□□□□ -1.41
CBWD1-224ENST00000616803 ABI1Q8IZP0 508 aa6.27□□□□□ -1.41
CBWD1-224ENST00000616803 RNF214Q8ND24 703 aa6.27□□□□□ -1.41
CBWD1-224ENST00000616803 FMNL2Q96PY5 1086 aa6.27□□□□□ -1.41
CBWD1-224ENST00000616803 DUSP23Q9BVJ7 150 aa6.27□□□□□ -1.41
CBWD1-224ENST00000616803 FBRSQ9HAH7 460 aa6.27□□□□□ -1.41
CBWD1-224ENST00000616803 PPM1HQ9ULR3 514 aa6.27□□□□□ -1.41
CBWD1-224ENST00000616803 PCDHA4Q9UN74 947 aa6.27□□□□□ -1.41
CBWD1-224ENST00000616803 PLAGL2Q9UPG8 496 aa6.27□□□□□ -1.41
CBWD1-224ENST00000616803 TRIM37O94972 964 aa6.26□□□□□ -1.41
CBWD1-224ENST00000616803 WNT11O96014 354 aa6.26□□□□□ -1.41
CBWD1-224ENST00000616803 YBX3P16989 372 aaKnown RBP eCLIP6.26□□□□□ -1.41
CBWD1-224ENST00000616803 GRIK1P39086 918 aa6.26□□□□□ -1.41
CBWD1-224ENST00000616803 ERVK-24P63145 666 aa6.26□□□□□ -1.41
CBWD1-224ENST00000616803 ATP2B2Q01814 1243 aa6.26□□□□□ -1.41
CBWD1-224ENST00000616803 SEPT6Q14141 434 aa6.26□□□□□ -1.41
CBWD1-224ENST00000616803 PLD6Q8N2A8 252 aaKnown RBP6.26□□□□□ -1.41
CBWD1-224ENST00000616803 PLPPR2Q96GM1 343 aa6.26□□□□□ -1.41
CBWD1-224ENST00000616803 YIPF2Q9BWQ6 316 aa6.26□□□□□ -1.41
CBWD1-224ENST00000616803 EMILIN2Q9BXX0 1053 aa6.26□□□□□ -1.41
CBWD1-224ENST00000616803 PIDD1Q9HB75 910 aa6.26□□□□□ -1.41
CBWD1-224ENST00000616803 ADGRE2Q9UHX3 823 aa6.26□□□□□ -1.41
CBWD1-224ENST00000616803 PCOLCE2Q9UKZ9 415 aa6.26□□□□□ -1.41
CBWD1-224ENST00000616803 TTF2Q9UNY4 1162 aaKnown RBP6.26□□□□□ -1.41
CBWD1-224ENST00000616803 TLR6Q9Y2C9 796 aa6.26□□□□□ -1.41
CBWD1-224ENST00000616803 RNF114Q9Y508 228 aa6.26□□□□□ -1.41
CBWD1-224ENST00000616803 PRNPP04156 253 aa6.25□□□□□ -1.41
CBWD1-224ENST00000616803 EIF4BP23588 611 aaKnown RBP6.25□□□□□ -1.41
CBWD1-224ENST00000616803 DAB2P98082 770 aa6.25□□□□□ -1.41
CBWD1-224ENST00000616803 NKG7Q16617 165 aa6.25□□□□□ -1.41
CBWD1-224ENST00000616803 ZBTB37Q5TC79 503 aa6.25□□□□□ -1.41
CBWD1-224ENST00000616803 TTBK2Q6IQ55 1244 aa6.25□□□□□ -1.41
CBWD1-224ENST00000616803 CYFIP1Q7L576 1253 aa6.25□□□□□ -1.41
CBWD1-224ENST00000616803 TOP6BLQ8N6T0 577 aa6.25□□□□□ -1.41
CBWD1-224ENST00000616803 RIN3Q8TB24 985 aa6.25□□□□□ -1.41
CBWD1-224ENST00000616803 ACSBG1Q96GR2 724 aa6.25□□□□□ -1.41
CBWD1-224ENST00000616803 CEP44Q9C0F1 390 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms