RNA–Protein interactions for RNA: ENST00000616395.4

TRAPPC3-209, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-209ENST00000616395 PRRT2Q7Z6L0 340 aaPredicted RBP22.04■■□□□ 1.12
TRAPPC3-209ENST00000616395 SUGT1Q9Y2Z0 365 aa22.04■■□□□ 1.12
TRAPPC3-209ENST00000616395 NFIAQ12857 509 aa22.03■■□□□ 1.12
TRAPPC3-209ENST00000616395 GADL1Q6ZQY3 521 aa22.03■■□□□ 1.12
TRAPPC3-209ENST00000616395 WDR63Q8IWG1 891 aa22.03■■□□□ 1.12
TRAPPC3-209ENST00000616395 ANKLE1Q8NAG6 615 aa22.03■■□□□ 1.12
TRAPPC3-209ENST00000616395 ZHX2Q9Y6X8 837 aa22.03■■□□□ 1.12
TRAPPC3-209ENST00000616395 CDC42EP5Q6NZY7 148 aa22.02■■□□□ 1.12
TRAPPC3-209ENST00000616395 SMCR8Q8TEV9 937 aaPredicted RBP22.02■■□□□ 1.12
TRAPPC3-209ENST00000616395 UBE2OQ9C0C9 1292 aaKnown RBP22.02■■□□□ 1.12
TRAPPC3-209ENST00000616395 NBPF3Q9H094 633 aa22.02■■□□□ 1.12
TRAPPC3-209ENST00000616395 C9orf78Q9NZ63 289 aaPredicted RBP22.02■■□□□ 1.12
TRAPPC3-209ENST00000616395 METTL24Q5JXM2 366 aa22.01■■□□□ 1.11
TRAPPC3-209ENST00000616395 COA7Q96BR5 231 aa22.01■■□□□ 1.11
TRAPPC3-209ENST00000616395 SLC45A1Q9Y2W3 748 aa22.01■■□□□ 1.11
TRAPPC3-209ENST00000616395 PHF20L1A8MW92 1017 aa22■■□□□ 1.11
TRAPPC3-209ENST00000616395 LRRC24Q50LG9 513 aa22■■□□□ 1.11
TRAPPC3-209ENST00000616395 SCYL3Q8IZE3 742 aa22■■□□□ 1.11
TRAPPC3-209ENST00000616395 ANKRD13CQ8N6S4 541 aa22■■□□□ 1.11
TRAPPC3-209ENST00000616395 KAZALD1Q96I82 304 aa22■■□□□ 1.11
TRAPPC3-209ENST00000616395 SUCLG2Q96I99 432 aa22■■□□□ 1.11
TRAPPC3-209ENST00000616395 PICK1Q9NRD5 415 aa22■■□□□ 1.11
TRAPPC3-209ENST00000616395 FAM198AQ9UFP1 575 aa22■■□□□ 1.11
TRAPPC3-209ENST00000616395 DAGLAQ9Y4D2 1042 aa22■■□□□ 1.11
TRAPPC3-209ENST00000616395 AFG3L2Q9Y4W6 797 aa22■■□□□ 1.11
TRAPPC3-209ENST00000616395 ZNF521Q96K83 1311 aa21.99■■□□□ 1.11
TRAPPC3-209ENST00000616395 PTPRAP18433 802 aa21.99■■□□□ 1.11
TRAPPC3-209ENST00000616395 EXOSC9Q06265 439 aaKnown RBP21.99■■□□□ 1.11
TRAPPC3-209ENST00000616395 ZFPM1Q8IX07 1006 aa21.99■■□□□ 1.11
TRAPPC3-209ENST00000616395 VGLL2Q8N8G2 317 aa21.99■■□□□ 1.11
TRAPPC3-209ENST00000616395 C11orf49Q9H6J7 331 aa21.99■■□□□ 1.11
TRAPPC3-209ENST00000616395 RPTORQ8N122 1335 aa21.98■■□□□ 1.11
TRAPPC3-209ENST00000616395 VAMP4O75379 141 aa21.98■■□□□ 1.11
TRAPPC3-209ENST00000616395 PDE8BO95263 885 aa21.98■■□□□ 1.11
TRAPPC3-209ENST00000616395 DIXDC1Q155Q3 683 aa21.98■■□□□ 1.11
TRAPPC3-209ENST00000616395 HMGCRP04035 888 aa21.97■■□□□ 1.11
TRAPPC3-209ENST00000616395 ATRNL1Q5VV63 1379 aa21.97■■□□□ 1.11
TRAPPC3-209ENST00000616395 TRIM32Q13049 653 aa21.96■■□□□ 1.11
TRAPPC3-209ENST00000616395 GUCD1Q96NT3 240 aa21.96■■□□□ 1.11
TRAPPC3-209ENST00000616395 HMX1Q9NP08 348 aaPredicted RBP21.96■■□□□ 1.11
TRAPPC3-209ENST00000616395 USP40Q9NVE5 1235 aa21.96■■□□□ 1.11
TRAPPC3-209ENST00000616395 DDX60LQ5H9U9 1706 aaKnown RBP21.96■■□□□ 1.11
TRAPPC3-209ENST00000616395 AK9Q5TCS8 1911 aa21.95■■□□□ 1.1
TRAPPC3-209ENST00000616395 TRIM75PA6NK02 468 aa21.95■■□□□ 1.1
TRAPPC3-209ENST00000616395 ALDH1L1O75891 902 aa21.94■■□□□ 1.1
TRAPPC3-209ENST00000616395 SLC4A10Q6U841 1118 aa21.94■■□□□ 1.1
TRAPPC3-209ENST00000616395 WDR66Q8TBY9 1149 aa21.94■■□□□ 1.1
TRAPPC3-209ENST00000616395 OGDHLQ9ULD0 1010 aa21.94■■□□□ 1.1
TRAPPC3-209ENST00000616395 AGTPBP1Q9UPW5 1226 aa21.94■■□□□ 1.1
TRAPPC3-209ENST00000616395 POTEB2H3BUK9 544 aa21.93■■□□□ 1.1
TRAPPC3-209ENST00000616395 NBPF7P0C2Y1 421 aaPredicted RBP21.93■■□□□ 1.1
TRAPPC3-209ENST00000616395 FAM110CQ1W6H9 321 aa21.93■■□□□ 1.1
TRAPPC3-209ENST00000616395 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.93■■□□□ 1.1
TRAPPC3-209ENST00000616395 CACNA1FO60840 1977 aa21.93■■□□□ 1.1
TRAPPC3-209ENST00000616395 VCANP13611 3396 aa21.93■■□□□ 1.1
TRAPPC3-209ENST00000616395 PFASO15067 1338 aa21.93■■□□□ 1.1
TRAPPC3-209ENST00000616395 KIF16BQ96L93 1317 aa21.93■■□□□ 1.1
TRAPPC3-209ENST00000616395 E9PSI1 815 aa21.92■■□□□ 1.1
TRAPPC3-209ENST00000616395 IFIT1P09914 478 aaKnown RBP21.92■■□□□ 1.1
TRAPPC3-209ENST00000616395 SLURP2P0DP57 97 aa21.92■■□□□ 1.1
TRAPPC3-209ENST00000616395 PRDX5P30044 214 aa21.92■■□□□ 1.1
TRAPPC3-209ENST00000616395 TREML2Q5T2D2 321 aa21.92■■□□□ 1.1
TRAPPC3-209ENST00000616395 CCDC84Q86UT8 332 aaPredicted RBP21.92■■□□□ 1.1
TRAPPC3-209ENST00000616395 KLHDC4Q8TBB5 520 aa21.92■■□□□ 1.1
TRAPPC3-209ENST00000616395 FAM161BQ96MY7 647 aa21.92■■□□□ 1.1
TRAPPC3-209ENST00000616395 SRCIN1Q9C0H9 1055 aa21.92■■□□□ 1.1
TRAPPC3-209ENST00000616395 BICC1Q9H694 974 aaKnown RBP21.92■■□□□ 1.1
TRAPPC3-209ENST00000616395 GJD2Q9UKL4 321 aa21.92■■□□□ 1.1
TRAPPC3-209ENST00000616395 FGFR2P21802 821 aa21.91■■□□□ 1.1
TRAPPC3-209ENST00000616395 RGS3P49796 1198 aa21.91■■□□□ 1.1
TRAPPC3-209ENST00000616395 PUM3Q15397 648 aaKnown RBP21.91■■□□□ 1.1
TRAPPC3-209ENST00000616395 FAM109BQ6ICB4 259 aaPredicted RBP21.91■■□□□ 1.1
TRAPPC3-209ENST00000616395 SH3BP5LQ7L8J4 393 aa21.91■■□□□ 1.1
TRAPPC3-209ENST00000616395 LRRFIP2Q9Y608 721 aaKnown RBP21.91■■□□□ 1.1
TRAPPC3-209ENST00000616395 DOCK3Q8IZD9 2030 aa21.9■■□□□ 1.1
TRAPPC3-209ENST00000616395 MDM2Q00987 491 aaPredicted RBP21.9■■□□□ 1.1
TRAPPC3-209ENST00000616395 RABL6Q3YEC7 729 aaPredicted RBP21.9■■□□□ 1.1
TRAPPC3-209ENST00000616395 PNMA3Q9UL41 463 aa21.9■■□□□ 1.1
TRAPPC3-209ENST00000616395 SUPT16HQ9Y5B9 1047 aaKnown RBP21.9■■□□□ 1.1
TRAPPC3-209ENST00000616395 PTPRFP10586 1907 aa21.9■■□□□ 1.1
TRAPPC3-209ENST00000616395 CTNND1O60716 968 aaKnown RBP21.89■■□□□ 1.1
TRAPPC3-209ENST00000616395 MAP3K10Q02779 954 aa21.89■■□□□ 1.1
TRAPPC3-209ENST00000616395 ZSCAN29Q8IWY8 852 aaPredicted RBP21.89■■□□□ 1.1
TRAPPC3-209ENST00000616395 ANKRD44Q8N8A2 993 aa21.89■■□□□ 1.1
TRAPPC3-209ENST00000616395 TRIB2Q92519 343 aa21.89■■□□□ 1.1
TRAPPC3-209ENST00000616395 CDCA7LQ96GN5 454 aa21.89■■□□□ 1.1
TRAPPC3-209ENST00000616395 EYSQ5T1H1 3165 aa21.89■■□□□ 1.09
TRAPPC3-209ENST00000616395 DOCK2Q92608 1830 aa21.89■■□□□ 1.09
TRAPPC3-209ENST00000616395 LAMA2P24043 3122 aaKnown RBP21.88■■□□□ 1.09
TRAPPC3-209ENST00000616395 ENTPD3O75355 529 aa21.88■■□□□ 1.09
TRAPPC3-209ENST00000616395 LDHBP07195 334 aaKnown RBP21.88■■□□□ 1.09
TRAPPC3-209ENST00000616395 ERICH6BQ5W0A0 696 aa21.88■■□□□ 1.09
TRAPPC3-209ENST00000616395 PRDM6Q9NQX0 595 aa21.88■■□□□ 1.09
TRAPPC3-209ENST00000616395 UTYO14607 1347 aa21.88■■□□□ 1.09
TRAPPC3-209ENST00000616395 PHIPQ8WWQ0 1821 aa21.88■■□□□ 1.09
TRAPPC3-209ENST00000616395 IDI2Q9BXS1 227 aa21.87■■□□□ 1.09
TRAPPC3-209ENST00000616395 DOCK1Q14185 1865 aa21.87■■□□□ 1.09
TRAPPC3-209ENST00000616395 COL2A1P02458 1487 aaPredicted RBP21.87■■□□□ 1.09
TRAPPC3-209ENST00000616395 SPTBN5Q9NRC6 3674 aaKnown RBP21.86■■□□□ 1.09
TRAPPC3-209ENST00000616395 DDTLA6NHG4 134 aaPredicted RBP21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms