RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 MNAT1P51948 309 aa14.07□□□□□ -0.16
TCF4-248ENST00000616053 PDCD2Q16342 344 aaPredicted RBP14.07□□□□□ -0.16
TCF4-248ENST00000616053 TTLL7Q6ZT98 887 aa14.07□□□□□ -0.16
TCF4-248ENST00000616053 SAP30BPQ9UHR5 308 aaKnown RBP14.07□□□□□ -0.16
TCF4-248ENST00000616053 ZBBXA8MT70 800 aa14.07□□□□□ -0.16
TCF4-248ENST00000616053 F8W8V4 182 aa14.07□□□□□ -0.16
TCF4-248ENST00000616053 MX1P20591 662 aa14.07□□□□□ -0.16
TCF4-248ENST00000616053 ATP5DP30049 168 aa14.07□□□□□ -0.16
TCF4-248ENST00000616053 TMEM106CQ9BVX2 250 aa14.07□□□□□ -0.16
TCF4-248ENST00000616053 PARP1P09874 1014 aaKnown RBP14.07□□□□□ -0.16
TCF4-248ENST00000616053 PSMD2Q13200 908 aa14.07□□□□□ -0.16
TCF4-248ENST00000616053 ZNF365Q70YC5 407 aa14.07□□□□□ -0.16
TCF4-248ENST00000616053 LZICQ8WZA0 190 aa14.07□□□□□ -0.16
TCF4-248ENST00000616053 HDAC11Q96DB2 347 aa14.07□□□□□ -0.16
TCF4-248ENST00000616053 ZKSCAN3Q9BRR0 538 aa14.07□□□□□ -0.16
TCF4-248ENST00000616053 IVLP07476 585 aa14.06□□□□□ -0.16
TCF4-248ENST00000616053 PRKCQQ04759 706 aa14.06□□□□□ -0.16
TCF4-248ENST00000616053 CTAGE6Q86UF2 777 aa14.06□□□□□ -0.16
TCF4-248ENST00000616053 CACNA2D3Q8IZS8 1091 aa14.06□□□□□ -0.16
TCF4-248ENST00000616053 ATP6V0A1Q93050 837 aa14.06□□□□□ -0.16
TCF4-248ENST00000616053 ARHGAP5Q13017 1502 aa14.06□□□□□ -0.16
TCF4-248ENST00000616053 NFKBIAP25963 317 aa14.06□□□□□ -0.16
TCF4-248ENST00000616053 PPP2R5AQ15172 486 aa14.06□□□□□ -0.16
TCF4-248ENST00000616053 NXNQ6DKJ4 435 aa14.06□□□□□ -0.16
TCF4-248ENST00000616053 SDCCAG3Q96C92 435 aa14.06□□□□□ -0.16
TCF4-248ENST00000616053 DBF4Q9UBU7 674 aaPredicted RBP14.06□□□□□ -0.16
TCF4-248ENST00000616053 UBXN8O00124 270 aa14.06□□□□□ -0.16
TCF4-248ENST00000616053 CPLX4Q7Z7G2 160 aa14.06□□□□□ -0.16
TCF4-248ENST00000616053 TRERF1Q96PN7 1200 aa14.06□□□□□ -0.16
TCF4-248ENST00000616053 NVLO15381 856 aaKnown RBP14.06□□□□□ -0.16
TCF4-248ENST00000616053 UFL1O94874 794 aa14.06□□□□□ -0.16
TCF4-248ENST00000616053 SYF2O95926 243 aaKnown RBP14.06□□□□□ -0.16
TCF4-248ENST00000616053 NUDT16Q96DE0 195 aaKnown RBP14.06□□□□□ -0.16
TCF4-248ENST00000616053 SAMD15Q9P1V8 674 aa14.06□□□□□ -0.16
TCF4-248ENST00000616053 I3L4J1 428 aa14.06□□□□□ -0.16
TCF4-248ENST00000616053 CHD1LQ86WJ1 897 aa14.06□□□□□ -0.16
TCF4-248ENST00000616053 SMARCA2P51531 1590 aa14.06□□□□□ -0.16
TCF4-248ENST00000616053 MICALL1Q8N3F8 863 aa14.06□□□□□ -0.16
TCF4-248ENST00000616053 SUCLA2Q9P2R7 463 aaPredicted RBP14.06□□□□□ -0.16
TCF4-248ENST00000616053 MAP3K2Q9Y2U5 619 aa14.06□□□□□ -0.16
TCF4-248ENST00000616053 KRT81Q14533 505 aa14.05□□□□□ -0.16
TCF4-248ENST00000616053 SZRD1Q7Z422 152 aa14.05□□□□□ -0.16
TCF4-248ENST00000616053 ATP6V1E2Q96A05 226 aa14.05□□□□□ -0.16
TCF4-248ENST00000616053 SCYL1Q96KG9 808 aa14.05□□□□□ -0.16
TCF4-248ENST00000616053 LBHD1Q9BQE6 289 aaPredicted RBP14.05□□□□□ -0.16
TCF4-248ENST00000616053 ZRANB1Q9UGI0 708 aa14.05□□□□□ -0.16
TCF4-248ENST00000616053 PTPREP23469 700 aa14.05□□□□□ -0.16
TCF4-248ENST00000616053 DPP8Q6V1X1 898 aaPredicted RBP14.05□□□□□ -0.16
TCF4-248ENST00000616053 SUGT1Q9Y2Z0 365 aa14.05□□□□□ -0.16
TCF4-248ENST00000616053 YWHAEP62258 255 aaKnown RBP14.05□□□□□ -0.16
TCF4-248ENST00000616053 HP1BP3Q5SSJ5 553 aaPredicted RBP14.05□□□□□ -0.16
TCF4-248ENST00000616053 ZCRB1Q8TBF4 217 aaKnown RBP14.05□□□□□ -0.16
TCF4-248ENST00000616053 FHOD3Q2V2M9 1422 aa14.05□□□□□ -0.16
TCF4-248ENST00000616053 TNFAIP3P21580 790 aa14.05□□□□□ -0.16
TCF4-248ENST00000616053 GSDMDP57764 484 aa14.05□□□□□ -0.16
TCF4-248ENST00000616053 TTC25Q96NG3 672 aa14.05□□□□□ -0.16
TCF4-248ENST00000616053 NPR1P16066 1061 aa14.04□□□□□ -0.16
TCF4-248ENST00000616053 ARL4DP49703 201 aa14.04□□□□□ -0.16
TCF4-248ENST00000616053 STX1AQ16623 288 aa14.04□□□□□ -0.16
TCF4-248ENST00000616053 PDZD4Q76G19 769 aaPredicted RBP14.04□□□□□ -0.16
TCF4-248ENST00000616053 NCAPG2Q86XI2 1143 aa14.04□□□□□ -0.16
TCF4-248ENST00000616053 TAF11Q15544 211 aa14.04□□□□□ -0.16
TCF4-248ENST00000616053 CCDC121Q6ZUS5 278 aa14.04□□□□□ -0.16
TCF4-248ENST00000616053 YAF2Q8IY57 180 aa14.04□□□□□ -0.16
TCF4-248ENST00000616053 ZFP91Q96JP5 570 aaPredicted RBP14.04□□□□□ -0.16
TCF4-248ENST00000616053 NEMP1O14524 444 aa14.04□□□□□ -0.16
TCF4-248ENST00000616053 TMOD1P28289 359 aa14.04□□□□□ -0.16
TCF4-248ENST00000616053 PHEXP78562 749 aa14.04□□□□□ -0.16
TCF4-248ENST00000616053 METTL23Q86XA0 190 aa14.04□□□□□ -0.16
TCF4-248ENST00000616053 USH1CQ9Y6N9 552 aa14.04□□□□□ -0.16
TCF4-248ENST00000616053 WASHC5Q12768 1159 aa14.04□□□□□ -0.16
TCF4-248ENST00000616053 SYNDIG1LA6NDD5 238 aa14.04□□□□□ -0.16
TCF4-248ENST00000616053 ZNF853P0CG23 659 aa14.04□□□□□ -0.16
TCF4-248ENST00000616053 GNG11P61952 73 aa14.04□□□□□ -0.16
TCF4-248ENST00000616053 KRT83P78385 493 aa14.04□□□□□ -0.16
TCF4-248ENST00000616053 TEX11Q8IYF3 940 aa14.04□□□□□ -0.16
TCF4-248ENST00000616053 PPP2R3CQ969Q6 453 aa14.04□□□□□ -0.16
TCF4-248ENST00000616053 TNFAIP1Q13829 316 aa14.04□□□□□ -0.16
TCF4-248ENST00000616053 PDZD8Q8NEN9 1154 aa14.04□□□□□ -0.16
TCF4-248ENST00000616053 YIPF2Q9BWQ6 316 aa14.04□□□□□ -0.16
TCF4-248ENST00000616053 APOL6Q9BWW8 343 aa14.04□□□□□ -0.16
TCF4-248ENST00000616053 SLC52A1Q9NWF4 448 aa14.04□□□□□ -0.16
TCF4-248ENST00000616053 ZSCAN20P17040 1043 aaPredicted RBP14.04□□□□□ -0.16
TCF4-248ENST00000616053 RAP1GDS1P52306 607 aa14.04□□□□□ -0.16
TCF4-248ENST00000616053 KANK4Q5T7N3 995 aaPredicted RBP14.04□□□□□ -0.16
TCF4-248ENST00000616053 DZIP3Q86Y13 1208 aaKnown RBP14.04□□□□□ -0.16
TCF4-248ENST00000616053 SYKP43405 635 aa14.03□□□□□ -0.16
TCF4-248ENST00000616053 DLGAP5Q15398 846 aa14.03□□□□□ -0.16
TCF4-248ENST00000616053 CCDC62Q6P9F0 684 aa14.03□□□□□ -0.16
TCF4-248ENST00000616053 PGBD3Q8N328 593 aa14.03□□□□□ -0.16
TCF4-248ENST00000616053 FGD4Q96M96 766 aa14.03□□□□□ -0.16
TCF4-248ENST00000616053 PUM3Q15397 648 aaKnown RBP14.03□□□□□ -0.16
TCF4-248ENST00000616053 SCYL2Q6P3W7 929 aa14.03□□□□□ -0.16
TCF4-248ENST00000616053 UBLCP1Q8WVY7 318 aaPredicted RBP14.03□□□□□ -0.16
TCF4-248ENST00000616053 SLC12A6Q9UHW9 1150 aa14.03□□□□□ -0.16
TCF4-248ENST00000616053 MAST3O60307 1309 aa14.03□□□□□ -0.16
TCF4-248ENST00000616053 SAT1P21673 171 aa14.03□□□□□ -0.16
TCF4-248ENST00000616053 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.03□□□□□ -0.16
TCF4-248ENST00000616053 CCDC42Q96M95 316 aa14.03□□□□□ -0.16
TCF4-248ENST00000616053 PLCB1Q9NQ66 1216 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms