RNA–Protein interactions for RNA: ENST00000614971.4

LTN1-207, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 7,756 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-207ENST00000614971 GOPCQ9HD26 462 aa4.32□□□□□ -1.72
LTN1-207ENST00000614971 RNF123Q5XPI4 1314 aa4.32□□□□□ -1.72
LTN1-207ENST00000614971 ARHGEF10O15013 1369 aa4.32□□□□□ -1.72
LTN1-207ENST00000614971 TMEM110-MUSTN1A8MSY1 372 aa4.32□□□□□ -1.72
LTN1-207ENST00000614971 ERVV-2B6SEH9 535 aa4.32□□□□□ -1.72
LTN1-207ENST00000614971 AKR1B10O60218 316 aa4.32□□□□□ -1.72
LTN1-207ENST00000614971 PDE8BO95263 885 aa4.32□□□□□ -1.72
LTN1-207ENST00000614971 PARP1P09874 1014 aaKnown RBP4.32□□□□□ -1.72
LTN1-207ENST00000614971 POLD1P28340 1107 aa4.32□□□□□ -1.72
LTN1-207ENST00000614971 GAS2L3Q86XJ1 694 aa4.32□□□□□ -1.72
LTN1-207ENST00000614971 RRP36Q96EU6 259 aaKnown RBP4.32□□□□□ -1.72
LTN1-207ENST00000614971 DENND2AQ9ULE3 1009 aa4.32□□□□□ -1.72
LTN1-207ENST00000614971 NEO1Q92859 1461 aa4.32□□□□□ -1.72
LTN1-207ENST00000614971 WDR17Q8IZU2 1322 aa4.32□□□□□ -1.72
LTN1-207ENST00000614971 GDF11O95390 407 aa4.32□□□□□ -1.72
LTN1-207ENST00000614971 USP17L8P0C7I0 530 aa4.32□□□□□ -1.72
LTN1-207ENST00000614971 KRT2P35908 639 aa4.32□□□□□ -1.72
LTN1-207ENST00000614971 GOLGA8FQ08AF8 430 aa4.32□□□□□ -1.72
LTN1-207ENST00000614971 GOLGA8DPQ0D2H9 430 aa4.32□□□□□ -1.72
LTN1-207ENST00000614971 TNIP1Q15025 636 aa4.32□□□□□ -1.72
LTN1-207ENST00000614971 CEP135Q66GS9 1140 aa4.32□□□□□ -1.72
LTN1-207ENST00000614971 NLRP10Q86W26 655 aa4.32□□□□□ -1.72
LTN1-207ENST00000614971 TRMT2AQ8IZ69 625 aaKnown RBP4.32□□□□□ -1.72
LTN1-207ENST00000614971 KCNG4Q8TDN1 519 aa4.32□□□□□ -1.72
LTN1-207ENST00000614971 RBM17Q96I25 401 aaKnown RBP4.32□□□□□ -1.72
LTN1-207ENST00000614971 KIF1BO60333 1816 aa4.32□□□□□ -1.72
LTN1-207ENST00000614971 MAP3K15Q6ZN16 1313 aa4.32□□□□□ -1.72
LTN1-207ENST00000614971 NPC1L1Q9UHC9 1359 aa4.32□□□□□ -1.72
LTN1-207ENST00000614971 ATP5JP18859 108 aa4.32□□□□□ -1.72
LTN1-207ENST00000614971 PARP10Q53GL7 1025 aa4.32□□□□□ -1.72
LTN1-207ENST00000614971 GIGYF2Q6Y7W6 1299 aaKnown RBP4.32□□□□□ -1.72
LTN1-207ENST00000614971 IFNL3Q8IZI9 196 aa4.32□□□□□ -1.72
LTN1-207ENST00000614971 SLC44A5Q8NCS7 719 aa4.32□□□□□ -1.72
LTN1-207ENST00000614971 FAM107BQ9H098 131 aa4.32□□□□□ -1.72
LTN1-207ENST00000614971 HDAC9Q9UKV0 1011 aa4.32□□□□□ -1.72
LTN1-207ENST00000614971 TBCAO75347 108 aaKnown RBP4.32□□□□□ -1.72
LTN1-207ENST00000614971 PNOCQ13519 176 aa4.32□□□□□ -1.72
LTN1-207ENST00000614971 DTHD1Q6ZMT9 781 aa4.32□□□□□ -1.72
LTN1-207ENST00000614971 GRAMD1CQ8IYS0 662 aa4.32□□□□□ -1.72
LTN1-207ENST00000614971 FAM200AQ8TCP9 573 aa4.32□□□□□ -1.72
LTN1-207ENST00000614971 LEO1Q8WVC0 666 aaPredicted RBP4.32□□□□□ -1.72
LTN1-207ENST00000614971 CARD10Q9BWT7 1032 aa4.32□□□□□ -1.72
LTN1-207ENST00000614971 PSDA5PKW4 1024 aaPredicted RBP4.31□□□□□ -1.72
LTN1-207ENST00000614971 PHACTR2O75167 634 aa4.31□□□□□ -1.72
LTN1-207ENST00000614971 PRDX5P30044 214 aa4.31□□□□□ -1.72
LTN1-207ENST00000614971 NR5A1Q13285 461 aa4.31□□□□□ -1.72
LTN1-207ENST00000614971 SCARF1Q14162 830 aa4.31□□□□□ -1.72
LTN1-207ENST00000614971 HLTFQ14527 1009 aaKnown RBP eCLIP4.31□□□□□ -1.726e-6■■■■□ 22
LTN1-207ENST00000614971 LLGL1Q15334 1064 aa4.31□□□□□ -1.72
LTN1-207ENST00000614971 LCORLQ8N3X6 602 aa4.31□□□□□ -1.72
LTN1-207ENST00000614971 PDCL2Q8N4E4 241 aa4.31□□□□□ -1.72
LTN1-207ENST00000614971 KIF18AQ8NI77 898 aa4.31□□□□□ -1.72
LTN1-207ENST00000614971 SPAG5Q96R06 1193 aa4.31□□□□□ -1.72
LTN1-207ENST00000614971 TSPYL1Q9H0U9 437 aa4.31□□□□□ -1.72
LTN1-207ENST00000614971 MYOM2P54296 1465 aa4.31□□□□□ -1.72
LTN1-207ENST00000614971 MLH3Q9UHC1 1453 aa4.31□□□□□ -1.72
LTN1-207ENST00000614971 SDK1Q7Z5N4 2213 aa4.31□□□□□ -1.72
LTN1-207ENST00000614971 CLTCL1P53675 1640 aa4.31□□□□□ -1.72
LTN1-207ENST00000614971 NMT2O60551 498 aa4.31□□□□□ -1.72
LTN1-207ENST00000614971 CDR1P51861 262 aa4.31□□□□□ -1.72
LTN1-207ENST00000614971 CYP4A11Q02928 519 aa4.31□□□□□ -1.72
LTN1-207ENST00000614971 ARHGAP27Q6ZUM4 889 aa4.31□□□□□ -1.72
LTN1-207ENST00000614971 C2CD5Q86YS7 1000 aa4.31□□□□□ -1.72
LTN1-207ENST00000614971 SMYD4Q8IYR2 804 aaPredicted RBP4.31□□□□□ -1.72
LTN1-207ENST00000614971 PAGR1Q9BTK6 254 aa4.31□□□□□ -1.72
LTN1-207ENST00000614971 ANKRD2Q9GZV1 360 aa4.31□□□□□ -1.72
LTN1-207ENST00000614971 TNKSO95271 1327 aa4.31□□□□□ -1.72
LTN1-207ENST00000614971 IBTKQ9P2D0 1353 aaPredicted RBP4.31□□□□□ -1.72
LTN1-207ENST00000614971 PPARAQ07869 468 aa4.31□□□□□ -1.72
LTN1-207ENST00000614971 SCRN1Q12765 414 aa4.31□□□□□ -1.72
LTN1-207ENST00000614971 RAPGEF1Q13905 1077 aa4.31□□□□□ -1.72
LTN1-207ENST00000614971 INF2Q27J81 1249 aa4.31□□□□□ -1.72
LTN1-207ENST00000614971 NBPF14Q5TI25 921 aa4.31□□□□□ -1.72
LTN1-207ENST00000614971 KCTD1Q719H9 257 aa4.31□□□□□ -1.72
LTN1-207ENST00000614971 ZNF654Q8IZM8 581 aa4.31□□□□□ -1.72
LTN1-207ENST00000614971 ZNF397Q8NF99 534 aaPredicted RBP4.31□□□□□ -1.72
LTN1-207ENST00000614971 CELF1Q92879 486 aaKnown RBP4.31□□□□□ -1.72
LTN1-207ENST00000614971 TSG101Q99816 390 aa4.31□□□□□ -1.72
LTN1-207ENST00000614971 HELLSQ9NRZ9 838 aa4.31□□□□□ -1.72
LTN1-207ENST00000614971 ATG3Q9NT62 314 aa4.31□□□□□ -1.72
LTN1-207ENST00000614971 GUCA1BQ9UMX6 200 aa4.31□□□□□ -1.72
LTN1-207ENST00000614971 ADGRL3Q9HAR2 1447 aa4.31□□□□□ -1.72
LTN1-207ENST00000614971 PPP1R12BO60237 982 aaPredicted RBP4.31□□□□□ -1.72
LTN1-207ENST00000614971 MMP10P09238 476 aa4.31□□□□□ -1.72
LTN1-207ENST00000614971 CYP2D6P10635 497 aa4.31□□□□□ -1.72
LTN1-207ENST00000614971 CACNB1Q02641 598 aaPredicted RBP4.31□□□□□ -1.72
LTN1-207ENST00000614971 LRMPQ12912 555 aa4.31□□□□□ -1.72
LTN1-207ENST00000614971 SNW1Q13573 536 aaKnown RBP4.31□□□□□ -1.72
LTN1-207ENST00000614971 ANO1Q5XXA6 986 aa4.31□□□□□ -1.72
LTN1-207ENST00000614971 EYA3Q99504 573 aa4.31□□□□□ -1.72
LTN1-207ENST00000614971 CTNND2Q9UQB3 1225 aa4.31□□□□□ -1.72
LTN1-207ENST00000614971 PLEKHG1Q9ULL1 1385 aa4.31□□□□□ -1.72
LTN1-207ENST00000614971 USP17L3A6NCW0 530 aa4.31□□□□□ -1.72
LTN1-207ENST00000614971 USP17L4A6NCW7 530 aa4.31□□□□□ -1.72
LTN1-207ENST00000614971 NBPF26B4DH59 902 aa4.31□□□□□ -1.72
LTN1-207ENST00000614971 KIF5CO60282 957 aa4.31□□□□□ -1.72
LTN1-207ENST00000614971 SERPINB2P05120 415 aa4.31□□□□□ -1.72
LTN1-207ENST00000614971 UBXN1Q04323 297 aa4.31□□□□□ -1.72
LTN1-207ENST00000614971 RASGRF1Q13972 1273 aa4.31□□□□□ -1.72
LTN1-207ENST00000614971 NCAPH2Q6IBW4 605 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms