RNA–Protein interactions for RNA: ENST00000612509.4

SEMA3B-211, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-211ENST00000612509 PPP4CP60510 307 aa21.97■■□□□ 1.11
SEMA3B-211ENST00000612509 VGLL4Q14135 290 aa21.97■■□□□ 1.11
SEMA3B-211ENST00000612509 SPRYD7Q5W111 196 aa21.97■■□□□ 1.11
SEMA3B-211ENST00000612509 TMED8Q6PL24 325 aaPredicted RBP21.97■■□□□ 1.11
SEMA3B-211ENST00000612509 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.97■■□□□ 1.11
SEMA3B-211ENST00000612509 SH3BP5LQ7L8J4 393 aa21.97■■□□□ 1.11
SEMA3B-211ENST00000612509 SLC10A4Q96EP9 437 aa21.97■■□□□ 1.11
SEMA3B-211ENST00000612509 EDC3Q96F86 508 aaKnown RBP21.97■■□□□ 1.11
SEMA3B-211ENST00000612509 GPATCH3Q96I76 525 aa21.97■■□□□ 1.11
SEMA3B-211ENST00000612509 WNK4Q96J92 1243 aa21.97■■□□□ 1.11
SEMA3B-211ENST00000612509 WRNIP1Q96S55 665 aa21.97■■□□□ 1.11
SEMA3B-211ENST00000612509 ZNF341Q9BYN7 854 aa21.97■■□□□ 1.11
SEMA3B-211ENST00000612509 ECHDC1Q9NTX5 307 aa21.97■■□□□ 1.11
SEMA3B-211ENST00000612509 PAG1Q9NWQ8 432 aa21.97■■□□□ 1.11
SEMA3B-211ENST00000612509 CTCFP49711 727 aaPredicted RBP21.96■■□□□ 1.11
SEMA3B-211ENST00000612509 MIGA2Q7L4E1 593 aa21.96■■□□□ 1.11
SEMA3B-211ENST00000612509 GCC1Q96CN9 775 aa21.96■■□□□ 1.11
SEMA3B-211ENST00000612509 CSRNP1Q96S65 589 aa21.96■■□□□ 1.11
SEMA3B-211ENST00000612509 OSBPL5Q9H0X9 879 aaPredicted RBP21.96■■□□□ 1.11
SEMA3B-211ENST00000612509 ELP3Q9H9T3 547 aa21.96■■□□□ 1.11
SEMA3B-211ENST00000612509 DDTLA6NHG4 134 aaPredicted RBP21.95■■□□□ 1.1
SEMA3B-211ENST00000612509 CA12O43570 354 aa21.95■■□□□ 1.1
SEMA3B-211ENST00000612509 ZBTB48P10074 688 aaPredicted RBP21.95■■□□□ 1.1
SEMA3B-211ENST00000612509 HSPA8P11142 646 aaKnown RBP21.95■■□□□ 1.1
SEMA3B-211ENST00000612509 MAP3K9P80192 1104 aa21.95■■□□□ 1.1
SEMA3B-211ENST00000612509 ZSCAN29Q8IWY8 852 aaPredicted RBP21.95■■□□□ 1.1
SEMA3B-211ENST00000612509 REM2Q8IYK8 340 aaPredicted RBP21.95■■□□□ 1.1
SEMA3B-211ENST00000612509 MIGA1Q8NAN2 632 aa21.95■■□□□ 1.1
SEMA3B-211ENST00000612509 CSADQ9Y600 493 aa21.95■■□□□ 1.1
SEMA3B-211ENST00000612509 SIPA1L1O43166 1804 aa21.94■■□□□ 1.1
SEMA3B-211ENST00000612509 PDE6AP16499 860 aa21.94■■□□□ 1.1
SEMA3B-211ENST00000612509 TSHZ3Q63HK5 1081 aa21.94■■□□□ 1.1
SEMA3B-211ENST00000612509 SNCAIPQ9Y6H5 919 aa21.94■■□□□ 1.1
SEMA3B-211ENST00000612509 DDX60LQ5H9U9 1706 aaKnown RBP21.94■■□□□ 1.1
SEMA3B-211ENST00000612509 FLT1P17948 1338 aa21.93■■□□□ 1.1
SEMA3B-211ENST00000612509 GJA5P36382 358 aa21.93■■□□□ 1.1
SEMA3B-211ENST00000612509 DYNLL1P63167 89 aaKnown RBP21.93■■□□□ 1.1
SEMA3B-211ENST00000612509 CERS3Q8IU89 383 aa21.93■■□□□ 1.1
SEMA3B-211ENST00000612509 NAV1Q8NEY1 1877 aa21.93■■□□□ 1.1
SEMA3B-211ENST00000612509 OPTNQ96CV9 577 aa21.93■■□□□ 1.1
SEMA3B-211ENST00000612509 DOCK1Q14185 1865 aa21.92■■□□□ 1.1
SEMA3B-211ENST00000612509 IRX6P78412 446 aaPredicted RBP21.92■■□□□ 1.1
SEMA3B-211ENST00000612509 SREBF2Q12772 1141 aa21.92■■□□□ 1.1
SEMA3B-211ENST00000612509 SLC9C2Q5TAH2 1124 aa21.92■■□□□ 1.1
SEMA3B-211ENST00000612509 OTUD7AQ8TE49 926 aaPredicted RBP21.92■■□□□ 1.1
SEMA3B-211ENST00000612509 TGFBRAP1Q8WUH2 860 aa21.92■■□□□ 1.1
SEMA3B-211ENST00000612509 SAGE1Q9NXZ1 904 aa21.92■■□□□ 1.1
SEMA3B-211ENST00000612509 TSKSQ9UJT2 592 aa21.92■■□□□ 1.1
SEMA3B-211ENST00000612509 ZNF112Q9UJU3 913 aa21.92■■□□□ 1.1
SEMA3B-211ENST00000612509 TTC41PQ6P2S7 1318 aa21.91■■□□□ 1.1
SEMA3B-211ENST00000612509 ZNF532Q9HCE3 1301 aa21.91■■□□□ 1.1
SEMA3B-211ENST00000612509 INPP5BP32019 993 aa21.91■■□□□ 1.1
SEMA3B-211ENST00000612509 LBX1P52954 281 aa21.91■■□□□ 1.1
SEMA3B-211ENST00000612509 MAPKAPK5Q8IW41 473 aa21.91■■□□□ 1.1
SEMA3B-211ENST00000612509 CNKSR2Q8WXI2 1034 aa21.91■■□□□ 1.1
SEMA3B-211ENST00000612509 ZKSCAN4Q969J2 545 aaPredicted RBP21.91■■□□□ 1.1
SEMA3B-211ENST00000612509 RWDD1Q9H446 243 aaPredicted RBP21.91■■□□□ 1.1
SEMA3B-211ENST00000612509 ZBTB47Q9UFB7 747 aaPredicted RBP21.91■■□□□ 1.1
SEMA3B-211ENST00000612509 MYH1P12882 1939 aa21.9■■□□□ 1.1
SEMA3B-211ENST00000612509 SALL3Q9BXA9 1300 aa21.9■■□□□ 1.1
SEMA3B-211ENST00000612509 TCRBV5S4A2TA0A5A2 114 aa21.9■■□□□ 1.1
SEMA3B-211ENST00000612509 MANSC4A6NHS7 340 aaPredicted RBP21.9■■□□□ 1.1
SEMA3B-211ENST00000612509 SPDYE5A6NIY4 337 aa21.9■■□□□ 1.1
SEMA3B-211ENST00000612509 IFFO2Q5TF58 517 aa21.9■■□□□ 1.1
SEMA3B-211ENST00000612509 ANKRD45Q5TZF3 282 aa21.9■■□□□ 1.1
SEMA3B-211ENST00000612509 RIOK1Q9BRS2 568 aaKnown RBP21.9■■□□□ 1.1
SEMA3B-211ENST00000612509 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.9■■□□□ 1.1
SEMA3B-211ENST00000612509 RNF186Q9NXI6 227 aa21.9■■□□□ 1.1
SEMA3B-211ENST00000612509 SLURP2P0DP57 97 aa21.89■■□□□ 1.09
SEMA3B-211ENST00000612509 MX1P20591 662 aa21.89■■□□□ 1.09
SEMA3B-211ENST00000612509 ADD2P35612 726 aa21.89■■□□□ 1.09
SEMA3B-211ENST00000612509 MAP3K10Q02779 954 aa21.89■■□□□ 1.09
SEMA3B-211ENST00000612509 NOL9Q5SY16 702 aaKnown RBP21.89■■□□□ 1.09
SEMA3B-211ENST00000612509 SMC5Q8IY18 1101 aa21.89■■□□□ 1.09
SEMA3B-211ENST00000612509 OTUD5Q96G74 571 aa21.89■■□□□ 1.09
SEMA3B-211ENST00000612509 PRDM10Q9NQV6 1147 aa21.89■■□□□ 1.09
SEMA3B-211ENST00000612509 MAGEB6P1A0A0J9YX57 407 aa21.88■■□□□ 1.09
SEMA3B-211ENST00000612509 TM4SF4P48230 202 aa21.88■■□□□ 1.09
SEMA3B-211ENST00000612509 PI4K2BQ8TCG2 481 aa21.88■■□□□ 1.09
SEMA3B-211ENST00000612509 ATAD5Q96QE3 1844 aa21.87■■□□□ 1.09
SEMA3B-211ENST00000612509 PHF20L1A8MW92 1017 aa21.87■■□□□ 1.09
SEMA3B-211ENST00000612509 ERC2O15083 957 aa21.87■■□□□ 1.09
SEMA3B-211ENST00000612509 TRPA1O75762 1119 aa21.87■■□□□ 1.09
SEMA3B-211ENST00000612509 IGHDP01880 384 aa21.87■■□□□ 1.09
SEMA3B-211ENST00000612509 USP5P45974 858 aa21.87■■□□□ 1.09
SEMA3B-211ENST00000612509 ERO1BQ86YB8 467 aa21.87■■□□□ 1.09
SEMA3B-211ENST00000612509 DHX36Q9H2U1 1008 aaKnown RBP21.87■■□□□ 1.09
SEMA3B-211ENST00000612509 FAM196BA6NMK8 535 aa21.86■■□□□ 1.09
SEMA3B-211ENST00000612509 TBC1D12O60347 775 aa21.86■■□□□ 1.09
SEMA3B-211ENST00000612509 GLRX3O76003 335 aaKnown RBP21.86■■□□□ 1.09
SEMA3B-211ENST00000612509 SLFNL1Q499Z3 407 aa21.86■■□□□ 1.09
SEMA3B-211ENST00000612509 COL13A1Q5TAT6 717 aaPredicted RBP21.86■■□□□ 1.09
SEMA3B-211ENST00000612509 CHGBP05060 677 aa21.85■■□□□ 1.09
SEMA3B-211ENST00000612509 PPIL2Q13356 520 aa21.85■■□□□ 1.09
SEMA3B-211ENST00000612509 UBE3CQ15386 1083 aa21.85■■□□□ 1.09
SEMA3B-211ENST00000612509 SCYL3Q8IZE3 742 aa21.85■■□□□ 1.09
SEMA3B-211ENST00000612509 LCORLQ8N3X6 602 aa21.85■■□□□ 1.09
SEMA3B-211ENST00000612509 KBTBD3Q8NAB2 608 aa21.85■■□□□ 1.09
SEMA3B-211ENST00000612509 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.85■■□□□ 1.093e-7■■■■□ 20.8
SEMA3B-211ENST00000612509 SAP30BPQ9UHR5 308 aaKnown RBP21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms