RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 SPATA31A5Q5VU36 1347 aa16.36■□□□□ 0.21
PCDHGA3-202ENST00000612467 SPATA31A7Q8IWB4 1347 aa16.36■□□□□ 0.21
PCDHGA3-202ENST00000612467 BECN2A8MW95 431 aa16.35■□□□□ 0.21
PCDHGA3-202ENST00000612467 ECM29Q5VYK3 1845 aa16.35■□□□□ 0.21
PCDHGA3-202ENST00000612467 CCDC69A6NI79 296 aa16.35■□□□□ 0.21
PCDHGA3-202ENST00000612467 ZNF202O95125 648 aa16.35■□□□□ 0.21
PCDHGA3-202ENST00000612467 ATP2B1P20020 1258 aa16.35■□□□□ 0.21
PCDHGA3-202ENST00000612467 TBC1D9BQ66K14 1250 aa16.35■□□□□ 0.21
PCDHGA3-202ENST00000612467 PTPN21Q16825 1174 aa16.34■□□□□ 0.21
PCDHGA3-202ENST00000612467 PARP10Q53GL7 1025 aa16.34■□□□□ 0.21
PCDHGA3-202ENST00000612467 FILIP1Q7Z7B0 1213 aa16.34■□□□□ 0.21
PCDHGA3-202ENST00000612467 ZNF384Q8TF68 577 aa16.34■□□□□ 0.21
PCDHGA3-202ENST00000612467 CHMP4CQ96CF2 233 aa16.34■□□□□ 0.21
PCDHGA3-202ENST00000612467 SPTLC3Q9NUV7 552 aa16.34■□□□□ 0.21
PCDHGA3-202ENST00000612467 BTBD18B2RXH4 712 aa16.34■□□□□ 0.21
PCDHGA3-202ENST00000612467 GRIN1Q05586 938 aa16.34■□□□□ 0.21
PCDHGA3-202ENST00000612467 TFCP2L1Q9NZI6 479 aa16.34■□□□□ 0.21
PCDHGA3-202ENST00000612467 ARAP2Q8WZ64 1704 aa16.34■□□□□ 0.21
PCDHGA3-202ENST00000612467 CHD4Q14839 1912 aa16.33■□□□□ 0.21
PCDHGA3-202ENST00000612467 WDR19Q8NEZ3 1342 aa16.33■□□□□ 0.21
PCDHGA3-202ENST00000612467 GOLGA6L6A8MZA4 724 aa16.33■□□□□ 0.21
PCDHGA3-202ENST00000612467 GTF2E1P29083 439 aaPredicted RBP16.33■□□□□ 0.21
PCDHGA3-202ENST00000612467 ATL3Q6DD88 541 aa16.33■□□□□ 0.21
PCDHGA3-202ENST00000612467 SHC4Q6S5L8 630 aa16.33■□□□□ 0.21
PCDHGA3-202ENST00000612467 BRAPQ7Z569 592 aa16.33■□□□□ 0.21
PCDHGA3-202ENST00000612467 KCNG4Q8TDN1 519 aa16.33■□□□□ 0.21
PCDHGA3-202ENST00000612467 TMEM87BQ96K49 555 aa16.33■□□□□ 0.21
PCDHGA3-202ENST00000612467 DOCK2Q92608 1830 aa16.33■□□□□ 0.2
PCDHGA3-202ENST00000612467 CTAGE5O15320 804 aa16.33■□□□□ 0.2
PCDHGA3-202ENST00000612467 YEATS4O95619 227 aa16.33■□□□□ 0.2
PCDHGA3-202ENST00000612467 BAZ2BQ9UIF8 2168 aaKnown RBP16.33■□□□□ 0.2
PCDHGA3-202ENST00000612467 NR5A1Q13285 461 aa16.32■□□□□ 0.2
PCDHGA3-202ENST00000612467 ALX1Q15699 326 aa16.32■□□□□ 0.2
PCDHGA3-202ENST00000612467 C16orf45Q96MC5 204 aaPredicted RBP16.32■□□□□ 0.2
PCDHGA3-202ENST00000612467 ANO10Q9NW15 660 aa16.32■□□□□ 0.2
PCDHGA3-202ENST00000612467 KIAA1468Q9P260 1216 aa16.32■□□□□ 0.2
PCDHGA3-202ENST00000612467 NRAPQ86VF7 1730 aa16.32■□□□□ 0.2
PCDHGA3-202ENST00000612467 AHDC1Q5TGY3 1603 aaPredicted RBP16.32■□□□□ 0.2
PCDHGA3-202ENST00000612467 COL22A1Q8NFW1 1626 aaPredicted RBP16.32■□□□□ 0.2
PCDHGA3-202ENST00000612467 A0A1W2PQ27 194 aa16.32■□□□□ 0.2
PCDHGA3-202ENST00000612467 A0A1W2PQ64 194 aa16.32■□□□□ 0.2
PCDHGA3-202ENST00000612467 A0A1W2PQD8 194 aa16.32■□□□□ 0.2
PCDHGA3-202ENST00000612467 FOXN1O15353 648 aa16.32■□□□□ 0.2
PCDHGA3-202ENST00000612467 PPARAQ07869 468 aa16.32■□□□□ 0.2
PCDHGA3-202ENST00000612467 SGMS1Q86VZ5 419 aa16.32■□□□□ 0.2
PCDHGA3-202ENST00000612467 ANKRD18AQ8IVF6 992 aa16.32■□□□□ 0.2
PCDHGA3-202ENST00000612467 AK7Q96M32 723 aa16.32■□□□□ 0.2
PCDHGA3-202ENST00000612467 C8orf37Q96NL8 207 aa16.32■□□□□ 0.2
PCDHGA3-202ENST00000612467 BCL2L12Q9HB09 334 aa16.32■□□□□ 0.2
PCDHGA3-202ENST00000612467 BCL9LQ86UU0 1499 aa16.32■□□□□ 0.2
PCDHGA3-202ENST00000612467 BAZ2AQ9UIF9 1905 aaKnown RBP16.32■□□□□ 0.2
PCDHGA3-202ENST00000612467 WTAPQ15007 396 aa16.32■□□□□ 0.2
PCDHGA3-202ENST00000612467 SLC39A14Q15043 492 aa16.32■□□□□ 0.2
PCDHGA3-202ENST00000612467 PTPAQ15257 358 aa16.32■□□□□ 0.2
PCDHGA3-202ENST00000612467 OXER1Q8TDS5 423 aa16.32■□□□□ 0.2
PCDHGA3-202ENST00000612467 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.32■□□□□ 0.2
PCDHGA3-202ENST00000612467 MINPP1Q9UNW1 487 aa16.32■□□□□ 0.2
PCDHGA3-202ENST00000612467 CICQ96RK0 1608 aaPredicted RBP16.31■□□□□ 0.2
PCDHGA3-202ENST00000612467 FAM205CA6NFA0 338 aa16.31■□□□□ 0.2
PCDHGA3-202ENST00000612467 SSRP1Q08945 709 aaKnown RBP16.31■□□□□ 0.2
PCDHGA3-202ENST00000612467 PNOCQ13519 176 aa16.31■□□□□ 0.2
PCDHGA3-202ENST00000612467 SHISA4Q96DD7 197 aa16.31■□□□□ 0.2
PCDHGA3-202ENST00000612467 MAP3K14Q99558 947 aa16.31■□□□□ 0.2
PCDHGA3-202ENST00000612467 USP27XA6NNY8 438 aa16.31■□□□□ 0.2
PCDHGA3-202ENST00000612467 SLC3A2P08195 630 aaKnown RBP16.31■□□□□ 0.2
PCDHGA3-202ENST00000612467 CEP57L1Q8IYX8 460 aa16.31■□□□□ 0.2
PCDHGA3-202ENST00000612467 CDCA7Q9BWT1 371 aaPredicted RBP16.31■□□□□ 0.2
PCDHGA3-202ENST00000612467 MAGEB6P1A0A0J9YX57 407 aa16.3■□□□□ 0.2
PCDHGA3-202ENST00000612467 RTN1Q16799 776 aa16.3■□□□□ 0.2
PCDHGA3-202ENST00000612467 CPLX2Q6PUV4 134 aaKnown RBP16.3■□□□□ 0.2
PCDHGA3-202ENST00000612467 FAM84BQ96KN1 310 aaPredicted RBP16.3■□□□□ 0.2
PCDHGA3-202ENST00000612467 NACAP1Q9BZK3 213 aa16.3■□□□□ 0.2
PCDHGA3-202ENST00000612467 THRAP3Q9Y2W1 955 aaKnown RBP16.3■□□□□ 0.2
PCDHGA3-202ENST00000612467 CDKL5O76039 1030 aa16.3■□□□□ 0.2
PCDHGA3-202ENST00000612467 TOB1P50616 345 aaPredicted RBP16.3■□□□□ 0.2
PCDHGA3-202ENST00000612467 CHAF1AQ13111 956 aaPredicted RBP16.3■□□□□ 0.2
PCDHGA3-202ENST00000612467 GLIPR1L2Q4G1C9 344 aa16.3■□□□□ 0.2
PCDHGA3-202ENST00000612467 TXNRD3Q86VQ6 643 aa16.3■□□□□ 0.2
PCDHGA3-202ENST00000612467 STAG1Q8WVM7 1258 aa16.3■□□□□ 0.2
PCDHGA3-202ENST00000612467 CDC5LQ99459 802 aaKnown RBP16.3■□□□□ 0.2
PCDHGA3-202ENST00000612467 MYH2Q9UKX2 1941 aa16.29■□□□□ 0.2
PCDHGA3-202ENST00000612467 NMT2O60551 498 aa16.29■□□□□ 0.2
PCDHGA3-202ENST00000612467 LIFRP42702 1097 aa16.29■□□□□ 0.2
PCDHGA3-202ENST00000612467 TRIM29Q14134 588 aa16.29■□□□□ 0.2
PCDHGA3-202ENST00000612467 HSP90AA4PQ58FG1 418 aa16.29■□□□□ 0.2
PCDHGA3-202ENST00000612467 DIS3L2Q8IYB7 885 aaKnown RBP16.29■□□□□ 0.2
PCDHGA3-202ENST00000612467 FMNL1O95466 1100 aaPredicted RBP16.29■□□□□ 0.2
PCDHGA3-202ENST00000612467 SYKP43405 635 aa16.29■□□□□ 0.2
PCDHGA3-202ENST00000612467 TERF1P54274 439 aa16.29■□□□□ 0.2
PCDHGA3-202ENST00000612467 RIOK1Q9BRS2 568 aaKnown RBP16.29■□□□□ 0.2
PCDHGA3-202ENST00000612467 KRT23Q9C075 422 aa16.29■□□□□ 0.2
PCDHGA3-202ENST00000612467 TNKSO95271 1327 aa16.29■□□□□ 0.2
PCDHGA3-202ENST00000612467 PNPLA7Q6ZV29 1317 aa16.29■□□□□ 0.2
PCDHGA3-202ENST00000612467 CMA1P23946 247 aa16.28■□□□□ 0.2
PCDHGA3-202ENST00000612467 LONRF3Q496Y0 759 aa16.28■□□□□ 0.2
PCDHGA3-202ENST00000612467 NOM1Q5C9Z4 860 aaKnown RBP16.28■□□□□ 0.2
PCDHGA3-202ENST00000612467 NBPF11Q86T75 865 aa16.28■□□□□ 0.2
PCDHGA3-202ENST00000612467 ZNF654Q8IZM8 581 aa16.28■□□□□ 0.2
PCDHGA3-202ENST00000612467 KLHL34Q8N239 644 aa16.28■□□□□ 0.2
PCDHGA3-202ENST00000612467 MYRIPQ8NFW9 859 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms