RNA–Protein interactions for RNA: ENST00000611950.1

PCDHGC3-202, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGC3, Length 2,849 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-202ENST00000611950 SDR16C5Q8N3Y7 309 aa12.36□□□□□ -0.43
PCDHGC3-202ENST00000611950 AOPEPQ8N6M6 819 aa12.36□□□□□ -0.43
PCDHGC3-202ENST00000611950 ATL2Q8NHH9 583 aa12.36□□□□□ -0.43
PCDHGC3-202ENST00000611950 TRERF1Q96PN7 1200 aa12.36□□□□□ -0.43
PCDHGC3-202ENST00000611950 FEZ1Q99689 392 aa12.36□□□□□ -0.43
PCDHGC3-202ENST00000611950 MAST3O60307 1309 aa12.36□□□□□ -0.43
PCDHGC3-202ENST00000611950 PALLDQ8WX93 1383 aa12.36□□□□□ -0.43
PCDHGC3-202ENST00000611950 ERVV-2B6SEH9 535 aa12.36□□□□□ -0.43
PCDHGC3-202ENST00000611950 CCDC73Q6ZRK6 1079 aa12.36□□□□□ -0.43
PCDHGC3-202ENST00000611950 MSL3Q8N5Y2 521 aaKnown RBP12.36□□□□□ -0.43
PCDHGC3-202ENST00000611950 CCDC97Q96F63 343 aaPredicted RBP12.36□□□□□ -0.43
PCDHGC3-202ENST00000611950 LRRC4BQ9NT99 713 aa12.36□□□□□ -0.43
PCDHGC3-202ENST00000611950 CTAGE5O15320 804 aa12.35□□□□□ -0.43
PCDHGC3-202ENST00000611950 KINO60870 393 aaKnown RBP12.35□□□□□ -0.43
PCDHGC3-202ENST00000611950 PDCL2Q8N4E4 241 aa12.35□□□□□ -0.43
PCDHGC3-202ENST00000611950 OSBP2Q969R2 916 aa12.35□□□□□ -0.43
PCDHGC3-202ENST00000611950 SDF4Q9BRK5 362 aa12.35□□□□□ -0.43
PCDHGC3-202ENST00000611950 KDM4CQ9H3R0 1056 aa12.35□□□□□ -0.43
PCDHGC3-202ENST00000611950 TOMM22Q9NS69 142 aa12.35□□□□□ -0.43
PCDHGC3-202ENST00000611950 CFAP45Q9UL16 551 aa12.35□□□□□ -0.43
PCDHGC3-202ENST00000611950 EYA2O00167 538 aa12.35□□□□□ -0.43
PCDHGC3-202ENST00000611950 ADD1P35611 737 aaKnown RBP12.35□□□□□ -0.43
PCDHGC3-202ENST00000611950 IL15P40933 162 aaPredicted RBP12.35□□□□□ -0.43
PCDHGC3-202ENST00000611950 SCARF1Q14162 830 aa12.35□□□□□ -0.43
PCDHGC3-202ENST00000611950 PAPPAQ13219 1627 aa12.34□□□□□ -0.43
PCDHGC3-202ENST00000611950 PAX7P23759 505 aa12.34□□□□□ -0.43
PCDHGC3-202ENST00000611950 KCNQ4P56696 695 aa12.34□□□□□ -0.43
PCDHGC3-202ENST00000611950 C1QTNF8P60827 252 aa12.34□□□□□ -0.43
PCDHGC3-202ENST00000611950 NKX1-1Q15270 411 aaPredicted RBP12.34□□□□□ -0.43
PCDHGC3-202ENST00000611950 SF3A1Q15459 793 aaKnown RBP12.34□□□□□ -0.43
PCDHGC3-202ENST00000611950 PLA2G4DQ86XP0 818 aa12.34□□□□□ -0.43
PCDHGC3-202ENST00000611950 CCDC191Q8NCU4 936 aa12.34□□□□□ -0.43
PCDHGC3-202ENST00000611950 AIFM3Q96NN9 605 aa12.34□□□□□ -0.43
PCDHGC3-202ENST00000611950 OGFRQ9NZT2 677 aa12.34□□□□□ -0.43
PCDHGC3-202ENST00000611950 PFKFB2O60825 505 aa12.34□□□□□ -0.43
PCDHGC3-202ENST00000611950 IPO7O95373 1038 aaKnown RBP12.34□□□□□ -0.43
PCDHGC3-202ENST00000611950 PDIA3P30101 505 aaKnown RBP12.34□□□□□ -0.43
PCDHGC3-202ENST00000611950 FAM89AQ96GI7 184 aa12.34□□□□□ -0.43
PCDHGC3-202ENST00000611950 RASSF4Q9H2L5 321 aa12.34□□□□□ -0.43
PCDHGC3-202ENST00000611950 GPR108Q9NPR9 543 aa12.34□□□□□ -0.43
PCDHGC3-202ENST00000611950 SHANK3Q9BYB0 1731 aa12.34□□□□□ -0.43
PCDHGC3-202ENST00000611950 GTF2F1P35269 517 aaKnown RBP eCLIP12.33□□□□□ -0.43
PCDHGC3-202ENST00000611950 ZMYM1Q5SVZ6 1142 aa12.33□□□□□ -0.43
PCDHGC3-202ENST00000611950 PROCA1Q8NCQ7 364 aaPredicted RBP12.33□□□□□ -0.43
PCDHGC3-202ENST00000611950 TDRD7Q8NHU6 1098 aaKnown RBP12.33□□□□□ -0.43
PCDHGC3-202ENST00000611950 RIPOR2Q9Y4F9 1068 aa12.33□□□□□ -0.43
PCDHGC3-202ENST00000611950 CLIC4Q9Y696 253 aa12.33□□□□□ -0.43
PCDHGC3-202ENST00000611950 LAMA4Q16363 1823 aa12.33□□□□□ -0.44
PCDHGC3-202ENST00000611950 GPTP24298 496 aa12.33□□□□□ -0.44
PCDHGC3-202ENST00000611950 MARCKSP29966 332 aaPredicted RBP12.33□□□□□ -0.44
PCDHGC3-202ENST00000611950 TERF2Q15554 542 aa12.33□□□□□ -0.44
PCDHGC3-202ENST00000611950 HSP90AA4PQ58FG1 418 aa12.33□□□□□ -0.44
PCDHGC3-202ENST00000611950 HELLSQ9NRZ9 838 aa12.33□□□□□ -0.44
PCDHGC3-202ENST00000611950 CEP350Q5VT06 3117 aa12.33□□□□□ -0.44
PCDHGC3-202ENST00000611950 SNW1Q13573 536 aaKnown RBP12.33□□□□□ -0.44
PCDHGC3-202ENST00000611950 IQCB1Q15051 598 aa12.33□□□□□ -0.44
PCDHGC3-202ENST00000611950 NKX2-3Q8TAU0 364 aa12.33□□□□□ -0.44
PCDHGC3-202ENST00000611950 ZSCAN16Q9H4T2 348 aaPredicted RBP12.33□□□□□ -0.44
PCDHGC3-202ENST00000611950 TFCP2L1Q9NZI6 479 aa12.33□□□□□ -0.44
PCDHGC3-202ENST00000611950 PCDHA7Q9UN72 937 aa12.33□□□□□ -0.44
PCDHGC3-202ENST00000611950 KLF18A0A0U1RQI7 1052 aa12.32□□□□□ -0.44
PCDHGC3-202ENST00000611950 GOLGA8BA8MQT2 603 aa12.32□□□□□ -0.44
PCDHGC3-202ENST00000611950 FDPSP14324 419 aaKnown RBP12.32□□□□□ -0.44
PCDHGC3-202ENST00000611950 NDUFA8P51970 172 aa12.32□□□□□ -0.44
PCDHGC3-202ENST00000611950 SMARCC2Q8TAQ2 1214 aa12.32□□□□□ -0.44
PCDHGC3-202ENST00000611950 GSCP56915 257 aaPredicted RBP12.32□□□□□ -0.44
PCDHGC3-202ENST00000611950 STK38Q15208 465 aa12.32□□□□□ -0.44
PCDHGC3-202ENST00000611950 DPCR1Q3MIW9 517 aa12.32□□□□□ -0.44
PCDHGC3-202ENST00000611950 TTC39AQ5SRH9 613 aa12.32□□□□□ -0.44
PCDHGC3-202ENST00000611950 NME8Q8N427 588 aa12.32□□□□□ -0.44
PCDHGC3-202ENST00000611950 ISCA1Q9BUE6 129 aa12.32□□□□□ -0.44
PCDHGC3-202ENST00000611950 DSCC1Q9BVC3 393 aa12.32□□□□□ -0.44
PCDHGC3-202ENST00000611950 PUS7LQ9H0K6 701 aaKnown RBP12.32□□□□□ -0.44
PCDHGC3-202ENST00000611950 INCENPQ9NQS7 918 aa12.32□□□□□ -0.44
PCDHGC3-202ENST00000611950 TOGARAM1Q9Y4F4 1720 aa12.31□□□□□ -0.44
PCDHGC3-202ENST00000611950 CARMIL3Q8ND23 1372 aa12.31□□□□□ -0.44
PCDHGC3-202ENST00000611950 UBE2Q2LH0YL09 131 aa12.31□□□□□ -0.44
PCDHGC3-202ENST00000611950 CIAO1O76071 339 aa12.31□□□□□ -0.44
PCDHGC3-202ENST00000611950 SMC2O95347 1197 aa12.31□□□□□ -0.44
PCDHGC3-202ENST00000611950 SKILP12757 684 aa12.31□□□□□ -0.44
PCDHGC3-202ENST00000611950 ZAP70P43403 619 aa12.31□□□□□ -0.44
PCDHGC3-202ENST00000611950 EXOSC10Q01780 885 aaKnown RBP12.31□□□□□ -0.44
PCDHGC3-202ENST00000611950 RAD51AP2Q09MP3 1159 aa12.31□□□□□ -0.44
PCDHGC3-202ENST00000611950 STX1AQ16623 288 aa12.31□□□□□ -0.44
PCDHGC3-202ENST00000611950 RBM43Q6ZSC3 357 aaKnown RBP12.31□□□□□ -0.44
PCDHGC3-202ENST00000611950 ANAPC4Q9UJX5 808 aa12.31□□□□□ -0.44
PCDHGC3-202ENST00000611950 CCDC69A6NI79 296 aa12.31□□□□□ -0.44
PCDHGC3-202ENST00000611950 RNF113AO15541 343 aaKnown RBP12.31□□□□□ -0.44
PCDHGC3-202ENST00000611950 INHBEP58166 350 aa12.31□□□□□ -0.44
PCDHGC3-202ENST00000611950 NCBP1Q09161 790 aaKnown RBP12.31□□□□□ -0.44
PCDHGC3-202ENST00000611950 MYL10Q9BUA6 226 aa12.31□□□□□ -0.44
PCDHGC3-202ENST00000611950 NUCKS1Q9H1E3 243 aaKnown RBP12.31□□□□□ -0.44
PCDHGC3-202ENST00000611950 CEP126Q9P2H0 1117 aa12.31□□□□□ -0.44
PCDHGC3-202ENST00000611950 CPLX1O14810 134 aa12.3□□□□□ -0.44
PCDHGC3-202ENST00000611950 FGAP02671 866 aa12.3□□□□□ -0.44
PCDHGC3-202ENST00000611950 TPM3P06753 285 aa12.3□□□□□ -0.44
PCDHGC3-202ENST00000611950 PPP2R5AQ15172 486 aa12.3□□□□□ -0.44
PCDHGC3-202ENST00000611950 ZRSR1Q15695 479 aaKnown RBP12.3□□□□□ -0.44
PCDHGC3-202ENST00000611950 LRRC8AQ8IWT6 810 aa12.3□□□□□ -0.44
PCDHGC3-202ENST00000611950 DHX40Q8IX18 779 aaKnown RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms