RNA–Protein interactions for RNA: ENST00000611897.1

HMGB1P24-201, Transcript of high mobility group box 1 pseudogene 24, humanhuman

BASIC

Gene HMGB1P24, Length 328 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P24-201ENST00000611897 NEUROD6Q96NK8 337 aa16.54■□□□□ 0.24
HMGB1P24-201ENST00000611897 COPRSQ9NQ92 184 aa16.54■□□□□ 0.24
HMGB1P24-201ENST00000611897 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.54■□□□□ 0.24
HMGB1P24-201ENST00000611897 SRRDQ9UH36 339 aa16.54■□□□□ 0.24
HMGB1P24-201ENST00000611897 PTPRFP10586 1907 aa16.54■□□□□ 0.24
HMGB1P24-201ENST00000611897 GAKO14976 1311 aa16.53■□□□□ 0.24
HMGB1P24-201ENST00000611897 ADGRA2Q96PE1 1338 aa16.53■□□□□ 0.24
HMGB1P24-201ENST00000611897 ENTPD3O75355 529 aa16.53■□□□□ 0.24
HMGB1P24-201ENST00000611897 CT47B1P0C2W7 299 aaPredicted RBP16.53■□□□□ 0.24
HMGB1P24-201ENST00000611897 HOXD10P28358 340 aa16.53■□□□□ 0.24
HMGB1P24-201ENST00000611897 MOGSQ13724 837 aa16.53■□□□□ 0.24
HMGB1P24-201ENST00000611897 GORABQ5T7V8 394 aa16.53■□□□□ 0.24
HMGB1P24-201ENST00000611897 SLF2Q8IX21 1173 aa16.53■□□□□ 0.24
HMGB1P24-201ENST00000611897 XAGE2Q96GT9 111 aa16.53■□□□□ 0.24
HMGB1P24-201ENST00000611897 DDX4Q9NQI0 724 aaKnown RBP16.53■□□□□ 0.24
HMGB1P24-201ENST00000611897 ATRNL1Q5VV63 1379 aa16.52■□□□□ 0.24
HMGB1P24-201ENST00000611897 MROH7-TTC4A0A0A0MT08 1334 aa16.52■□□□□ 0.24
HMGB1P24-201ENST00000611897 DDTLA6NHG4 134 aaPredicted RBP16.52■□□□□ 0.24
HMGB1P24-201ENST00000611897 TRIM75PA6NK02 468 aa16.52■□□□□ 0.24
HMGB1P24-201ENST00000611897 FAM196BA6NMK8 535 aa16.52■□□□□ 0.24
HMGB1P24-201ENST00000611897 GRK4P32298 578 aa16.52■□□□□ 0.24
HMGB1P24-201ENST00000611897 RARSP54136 660 aaKnown RBP16.52■□□□□ 0.24
HMGB1P24-201ENST00000611897 FCGRTP55899 365 aa16.52■□□□□ 0.24
HMGB1P24-201ENST00000611897 PRKCZQ05513 592 aa16.52■□□□□ 0.24
HMGB1P24-201ENST00000611897 MVPQ14764 893 aaKnown RBP16.52■□□□□ 0.24
HMGB1P24-201ENST00000611897 SPTY2D1Q68D10 685 aaPredicted RBP16.52■□□□□ 0.24
HMGB1P24-201ENST00000611897 PI16Q6UXB8 463 aa16.52■□□□□ 0.24
HMGB1P24-201ENST00000611897 ERICH6Q7L0X2 663 aa16.52■□□□□ 0.24
HMGB1P24-201ENST00000611897 SH3BP5LQ7L8J4 393 aa16.52■□□□□ 0.24
HMGB1P24-201ENST00000611897 IDI2Q9BXS1 227 aa16.52■□□□□ 0.24
HMGB1P24-201ENST00000611897 TAOK2Q9UL54 1235 aa16.52■□□□□ 0.24
HMGB1P24-201ENST00000611897 RFX7Q2KHR2 1363 aa16.51■□□□□ 0.23
HMGB1P24-201ENST00000611897 CXCL11O14625 94 aa16.51■□□□□ 0.23
HMGB1P24-201ENST00000611897 GNAI3P08754 354 aa16.51■□□□□ 0.23
HMGB1P24-201ENST00000611897 PTPRAP18433 802 aa16.51■□□□□ 0.23
HMGB1P24-201ENST00000611897 MECOMQ03112 1051 aa16.51■□□□□ 0.23
HMGB1P24-201ENST00000611897 GPAT2Q6NUI2 795 aa16.51■□□□□ 0.23
HMGB1P24-201ENST00000611897 TRMT2AQ8IZ69 625 aaKnown RBP16.51■□□□□ 0.23
HMGB1P24-201ENST00000611897 SMCR8Q8TEV9 937 aaPredicted RBP16.51■□□□□ 0.23
HMGB1P24-201ENST00000611897 FRAT1Q92837 279 aaPredicted RBP16.51■□□□□ 0.23
HMGB1P24-201ENST00000611897 TNNQ9UQP3 1299 aa16.51■□□□□ 0.23
HMGB1P24-201ENST00000611897 AKAP2Q9Y2D5 859 aa16.51■□□□□ 0.23
HMGB1P24-201ENST00000611897 A0A0G2JLL6 359 aaPredicted RBP16.5■□□□□ 0.23
HMGB1P24-201ENST00000611897 PHF20L1A8MW92 1017 aa16.5■□□□□ 0.23
HMGB1P24-201ENST00000611897 FASTKD5Q7L8L6 764 aaKnown RBP16.5■□□□□ 0.23
HMGB1P24-201ENST00000611897 PRRT2Q7Z6L0 340 aaPredicted RBP16.5■□□□□ 0.23
HMGB1P24-201ENST00000611897 CLUAP1Q96AJ1 413 aa16.5■□□□□ 0.23
HMGB1P24-201ENST00000611897 SHISA4Q96DD7 197 aa16.5■□□□□ 0.23
HMGB1P24-201ENST00000611897 RNF208Q9H0X6 261 aa16.5■□□□□ 0.23
HMGB1P24-201ENST00000611897 RAI14Q9P0K7 980 aa16.5■□□□□ 0.23
HMGB1P24-201ENST00000611897 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.5■□□□□ 0.23
HMGB1P24-201ENST00000611897 PHIPQ8WWQ0 1821 aa16.49■□□□□ 0.23
HMGB1P24-201ENST00000611897 ATAD5Q96QE3 1844 aa16.49■□□□□ 0.23
HMGB1P24-201ENST00000611897 H0YGN5 161 aa16.49■□□□□ 0.23
HMGB1P24-201ENST00000611897 BCRP11274 1271 aa16.49■□□□□ 0.23
HMGB1P24-201ENST00000611897 CCL5P13501 91 aa16.49■□□□□ 0.23
HMGB1P24-201ENST00000611897 TBC1D9Q6ZT07 1266 aa16.49■□□□□ 0.23
HMGB1P24-201ENST00000611897 DPF3Q92784 378 aa16.49■□□□□ 0.23
HMGB1P24-201ENST00000611897 GABRQQ9UN88 632 aa16.49■□□□□ 0.23
HMGB1P24-201ENST00000611897 COLQQ9Y215 455 aaPredicted RBP16.49■□□□□ 0.23
HMGB1P24-201ENST00000611897 PDS5AQ29RF7 1337 aaKnown RBP16.48■□□□□ 0.23
HMGB1P24-201ENST00000611897 UBXN2AP68543 259 aa16.48■□□□□ 0.23
HMGB1P24-201ENST00000611897 HMG20BQ9P0W2 317 aa16.48■□□□□ 0.23
HMGB1P24-201ENST00000611897 AFG3L2Q9Y4W6 797 aa16.48■□□□□ 0.23
HMGB1P24-201ENST00000611897 DOCK3Q8IZD9 2030 aa16.47■□□□□ 0.23
HMGB1P24-201ENST00000611897 TNPO2O14787 897 aaKnown RBP16.47■□□□□ 0.23
HMGB1P24-201ENST00000611897 CTNND1O60716 968 aaKnown RBP16.47■□□□□ 0.23
HMGB1P24-201ENST00000611897 ELNP15502 786 aa16.47■□□□□ 0.23
HMGB1P24-201ENST00000611897 SPATA5Q8NB90 893 aa16.47■□□□□ 0.23
HMGB1P24-201ENST00000611897 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.47■□□□□ 0.23
HMGB1P24-201ENST00000611897 GPR75-ASB3A0A0A6YYF3 556 aa16.46■□□□□ 0.23
HMGB1P24-201ENST00000611897 ADCY3O60266 1144 aa16.46■□□□□ 0.23
HMGB1P24-201ENST00000611897 GNAI2P04899 355 aa16.46■□□□□ 0.23
HMGB1P24-201ENST00000611897 TRIM27P14373 513 aa16.46■□□□□ 0.23
HMGB1P24-201ENST00000611897 FXR1P51114 621 aaKnown RBP eCLIP16.46■□□□□ 0.23
HMGB1P24-201ENST00000611897 RHBDL3P58872 404 aa16.46■□□□□ 0.23
HMGB1P24-201ENST00000611897 GSTO1P78417 241 aa16.46■□□□□ 0.23
HMGB1P24-201ENST00000611897 G3BP1Q13283 466 aaKnown RBP eCLIP16.46■□□□□ 0.23
HMGB1P24-201ENST00000611897 OS9Q13438 667 aaPredicted RBP16.46■□□□□ 0.23
HMGB1P24-201ENST00000611897 TEX11Q8IYF3 940 aa16.46■□□□□ 0.23
HMGB1P24-201ENST00000611897 ANKRD13CQ8N6S4 541 aa16.46■□□□□ 0.23
HMGB1P24-201ENST00000611897 SLAIN1Q8ND83 568 aa16.46■□□□□ 0.23
HMGB1P24-201ENST00000611897 NKX2-3Q8TAU0 364 aa16.46■□□□□ 0.23
HMGB1P24-201ENST00000611897 ZNF384Q8TF68 577 aa16.46■□□□□ 0.23
HMGB1P24-201ENST00000611897 FAM163AQ96GL9 167 aaPredicted RBP16.46■□□□□ 0.23
HMGB1P24-201ENST00000611897 NOL10Q9BSC4 688 aaKnown RBP16.46■□□□□ 0.23
HMGB1P24-201ENST00000611897 UNC93B1Q9H1C4 597 aa16.46■□□□□ 0.23
HMGB1P24-201ENST00000611897 LRP2BPQ9P2M1 347 aa16.46■□□□□ 0.23
HMGB1P24-201ENST00000611897 PNMA6EA0A0J9YXQ4 647 aa16.45■□□□□ 0.22
HMGB1P24-201ENST00000611897 IPO8O15397 1037 aaKnown RBP16.45■□□□□ 0.22
HMGB1P24-201ENST00000611897 LDHCP07864 332 aa16.45■□□□□ 0.22
HMGB1P24-201ENST00000611897 FLT3LGP49771 235 aa16.45■□□□□ 0.22
HMGB1P24-201ENST00000611897 MTX1Q13505 466 aa16.45■□□□□ 0.22
HMGB1P24-201ENST00000611897 TREML2Q5T2D2 321 aa16.45■□□□□ 0.22
HMGB1P24-201ENST00000611897 CHRDL2Q6WN34 429 aa16.45■□□□□ 0.22
HMGB1P24-201ENST00000611897 ARHGAP45Q92619 1136 aa16.45■□□□□ 0.22
HMGB1P24-201ENST00000611897 SNRKQ9NRH2 765 aa16.45■□□□□ 0.22
HMGB1P24-201ENST00000611897 AGTPBP1Q9UPW5 1226 aa16.45■□□□□ 0.22
HMGB1P24-201ENST00000611897 MAST2Q6P0Q8 1798 aa16.44■□□□□ 0.22
HMGB1P24-201ENST00000611897 BCAR3O75815 825 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms