RNA–Protein interactions for RNA: ENST00000611689.4

GRIA3-205, Transcript of glutamate ionotropic receptor AMPA type subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GRIA3, Length 936 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA3-205ENST00000611689 IL25Q9H293 177 aa18.64■□□□□ 0.57
GRIA3-205ENST00000611689 MKRN1Q9UHC7 482 aaKnown RBP18.64■□□□□ 0.57
GRIA3-205ENST00000611689 PPP2R3BQ9Y5P8 575 aa18.64■□□□□ 0.57
GRIA3-205ENST00000611689 FLT1P17948 1338 aa18.64■□□□□ 0.57
GRIA3-205ENST00000611689 CCDC171Q6TFL3 1326 aa18.64■□□□□ 0.57
GRIA3-205ENST00000611689 AK9Q5TCS8 1911 aa18.64■□□□□ 0.57
GRIA3-205ENST00000611689 GSG1L2A8MUP6 293 aa18.63■□□□□ 0.57
GRIA3-205ENST00000611689 SGSM2O43147 1006 aa18.63■□□□□ 0.57
GRIA3-205ENST00000611689 ITGBL1O95965 494 aaPredicted RBP18.63■□□□□ 0.57
GRIA3-205ENST00000611689 MFAP1P55081 439 aaKnown RBP18.63■□□□□ 0.57
GRIA3-205ENST00000611689 SMC1BQ8NDV3 1235 aa18.63■□□□□ 0.57
GRIA3-205ENST00000611689 TMEM39BQ9GZU3 492 aa18.63■□□□□ 0.57
GRIA3-205ENST00000611689 OSBPL5Q9H0X9 879 aaPredicted RBP18.63■□□□□ 0.57
GRIA3-205ENST00000611689 DCP1AQ9NPI6 582 aaPredicted RBP18.63■□□□□ 0.57
GRIA3-205ENST00000611689 ATP8A2Q9NTI2 1148 aa18.63■□□□□ 0.57
GRIA3-205ENST00000611689 RAD50Q92878 1312 aa18.63■□□□□ 0.57
GRIA3-205ENST00000611689 ECM29Q5VYK3 1845 aa18.63■□□□□ 0.57
GRIA3-205ENST00000611689 PATL2C9JE40 543 aaKnown RBP18.62■□□□□ 0.57
GRIA3-205ENST00000611689 VPS53Q5VIR6 699 aa18.62■□□□□ 0.57
GRIA3-205ENST00000611689 CASC1Q6TDU7 716 aa18.62■□□□□ 0.57
GRIA3-205ENST00000611689 SH3BP5LQ7L8J4 393 aa18.62■□□□□ 0.57
GRIA3-205ENST00000611689 TEPSINQ96N21 525 aa18.62■□□□□ 0.57
GRIA3-205ENST00000611689 ESYT1Q9BSJ8 1104 aa18.62■□□□□ 0.57
GRIA3-205ENST00000611689 RPAP1Q9BWH6 1393 aaPredicted RBP18.61■□□□□ 0.57
GRIA3-205ENST00000611689 TRAF5O00463 557 aa18.61■□□□□ 0.57
GRIA3-205ENST00000611689 FOXP2O15409 715 aa18.61■□□□□ 0.57
GRIA3-205ENST00000611689 PRAMEF18Q5VWM3 479 aa18.61■□□□□ 0.57
GRIA3-205ENST00000611689 GIMAP6Q6P9H5 292 aa18.61■□□□□ 0.57
GRIA3-205ENST00000611689 CDAN1Q8IWY9 1227 aa18.61■□□□□ 0.57
GRIA3-205ENST00000611689 DDTLA6NHG4 134 aaPredicted RBP18.6■□□□□ 0.57
GRIA3-205ENST00000611689 APPP05067 770 aa18.6■□□□□ 0.57
GRIA3-205ENST00000611689 FMR1Q06787 632 aaKnown RBP eCLIP18.6■□□□□ 0.57
GRIA3-205ENST00000611689 NBPF12Q5TAG4 269 aaPredicted RBP18.6■□□□□ 0.57
GRIA3-205ENST00000611689 IFNL3Q8IZI9 196 aa18.6■□□□□ 0.57
GRIA3-205ENST00000611689 CDCA5Q96FF9 252 aa18.6■□□□□ 0.57
GRIA3-205ENST00000611689 EPB41L4AQ9HCS5 686 aaPredicted RBP18.6■□□□□ 0.57
GRIA3-205ENST00000611689 SAP30BPQ9UHR5 308 aaKnown RBP18.6■□□□□ 0.57
GRIA3-205ENST00000611689 ATRNL1Q5VV63 1379 aa18.59■□□□□ 0.57
GRIA3-205ENST00000611689 HSPD1P10809 573 aaKnown RBP18.59■□□□□ 0.57
GRIA3-205ENST00000611689 FSTL1Q12841 308 aa18.59■□□□□ 0.57
GRIA3-205ENST00000611689 ZSCAN29Q8IWY8 852 aaPredicted RBP18.59■□□□□ 0.57
GRIA3-205ENST00000611689 DDRGK1Q96HY6 314 aa18.59■□□□□ 0.57
GRIA3-205ENST00000611689 DHX36Q9H2U1 1008 aaKnown RBP18.59■□□□□ 0.57
GRIA3-205ENST00000611689 MCM9Q9NXL9 1143 aa18.59■□□□□ 0.57
GRIA3-205ENST00000611689 PALD1Q9ULE6 856 aa18.59■□□□□ 0.57
GRIA3-205ENST00000611689 COL2A1P02458 1487 aaPredicted RBP18.58■□□□□ 0.57
GRIA3-205ENST00000611689 USP17L12C9JPN9 530 aa18.58■□□□□ 0.56
GRIA3-205ENST00000611689 USP17L21D6R901 530 aa18.58■□□□□ 0.56
GRIA3-205ENST00000611689 ALX1Q15699 326 aa18.58■□□□□ 0.56
GRIA3-205ENST00000611689 SUPT20HL1Q3ZLR7 823 aa18.58■□□□□ 0.56
GRIA3-205ENST00000611689 NACAP1Q9BZK3 213 aa18.58■□□□□ 0.56
GRIA3-205ENST00000611689 POLR2AP24928 1970 aaKnown RBP18.57■□□□□ 0.56
GRIA3-205ENST00000611689 CTR9Q6PD62 1173 aa18.57■□□□□ 0.56
GRIA3-205ENST00000611689 CSRNP1Q96S65 589 aa18.57■□□□□ 0.56
GRIA3-205ENST00000611689 DSCC1Q9BVC3 393 aa18.57■□□□□ 0.56
GRIA3-205ENST00000611689 PASKQ96RG2 1323 aa18.56■□□□□ 0.56
GRIA3-205ENST00000611689 FGAP02671 866 aa18.56■□□□□ 0.56
GRIA3-205ENST00000611689 POLR3DP05423 398 aaPredicted RBP18.56■□□□□ 0.56
GRIA3-205ENST00000611689 CYP2D6P10635 497 aa18.56■□□□□ 0.56
GRIA3-205ENST00000611689 TDO2P48775 406 aa18.56■□□□□ 0.56
GRIA3-205ENST00000611689 PLCD1P51178 756 aa18.56■□□□□ 0.56
GRIA3-205ENST00000611689 PTH1RQ03431 593 aa18.56■□□□□ 0.56
GRIA3-205ENST00000611689 SLC4A8Q2Y0W8 1093 aa18.56■□□□□ 0.56
GRIA3-205ENST00000611689 SBK1Q52WX2 424 aa18.56■□□□□ 0.56
GRIA3-205ENST00000611689 C12orf60Q5U649 245 aa18.56■□□□□ 0.56
GRIA3-205ENST00000611689 TTC6Q86TZ1 520 aa18.56■□□□□ 0.56
GRIA3-205ENST00000611689 NAPBQ9H115 298 aa18.56■□□□□ 0.56
GRIA3-205ENST00000611689 PI4KBQ9UBF8 816 aa18.56■□□□□ 0.56
GRIA3-205ENST00000611689 CDK5RAP2Q96SN8 1893 aa18.55■□□□□ 0.56
GRIA3-205ENST00000611689 CYP2D7A0A087X1C5 515 aa18.55■□□□□ 0.56
GRIA3-205ENST00000611689 HLA-DOAP06340 250 aa18.55■□□□□ 0.56
GRIA3-205ENST00000611689 MAP3K10Q02779 954 aa18.55■□□□□ 0.56
GRIA3-205ENST00000611689 KIAA1211Q6ZU35 1233 aa18.55■□□□□ 0.56
GRIA3-205ENST00000611689 FOXP4Q8IVH2 680 aaPredicted RBP18.55■□□□□ 0.56
GRIA3-205ENST00000611689 HOOK2Q96ED9 719 aa18.55■□□□□ 0.56
GRIA3-205ENST00000611689 LSG1Q9H089 658 aaKnown RBP18.55■□□□□ 0.56
GRIA3-205ENST00000611689 ARPP21Q9UBL0 812 aaPredicted RBP18.55■□□□□ 0.56
GRIA3-205ENST00000611689 FOCADQ5VW36 1801 aa18.55■□□□□ 0.56
GRIA3-205ENST00000611689 ZMYM6O95789 1325 aa18.54■□□□□ 0.56
GRIA3-205ENST00000611689 NF2P35240 595 aa18.54■□□□□ 0.56
GRIA3-205ENST00000611689 EVX2Q03828 476 aa18.54■□□□□ 0.56
GRIA3-205ENST00000611689 MIGA2Q7L4E1 593 aa18.54■□□□□ 0.56
GRIA3-205ENST00000611689 METTL16Q86W50 562 aaKnown RBP18.54■□□□□ 0.56
GRIA3-205ENST00000611689 AMOTL1Q8IY63 956 aa18.54■□□□□ 0.56
GRIA3-205ENST00000611689 ZNF408Q9H9D4 720 aa18.54■□□□□ 0.56
GRIA3-205ENST00000611689 SSC5DA1L4H1 1573 aa18.54■□□□□ 0.56
GRIA3-205ENST00000611689 MINDY4BA8MYZ0 360 aa18.53■□□□□ 0.56
GRIA3-205ENST00000611689 SMIM22K7EJ46 135 aa18.53■□□□□ 0.56
GRIA3-205ENST00000611689 TBC1D12O60347 775 aa18.53■□□□□ 0.56
GRIA3-205ENST00000611689 CELF2O95319 508 aaKnown RBP18.53■□□□□ 0.56
GRIA3-205ENST00000611689 SLURP2P0DP57 97 aa18.53■□□□□ 0.56
GRIA3-205ENST00000611689 CST9Q5W186 159 aa18.53■□□□□ 0.56
GRIA3-205ENST00000611689 MAP4K1Q92918 833 aa18.53■□□□□ 0.56
GRIA3-205ENST00000611689 EHD4Q9H223 541 aa18.53■□□□□ 0.56
GRIA3-205ENST00000611689 ANO2Q9NQ90 1003 aa18.53■□□□□ 0.56
GRIA3-205ENST00000611689 DDX60LQ5H9U9 1706 aaKnown RBP18.52■□□□□ 0.56
GRIA3-205ENST00000611689 DCAF15Q66K64 600 aa18.52■□□□□ 0.56
GRIA3-205ENST00000611689 HERC5Q9UII4 1024 aaKnown RBP18.52■□□□□ 0.56
GRIA3-205ENST00000611689 SERPINB13Q9UIV8 391 aa18.52■□□□□ 0.56
GRIA3-205ENST00000611689 FZD1Q9UP38 647 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms