RNA–Protein interactions for RNA: ENST00000610462.1

CSPG5-205, Transcript of chondroitin sulfate proteoglycan 5, human

TSL 5 BASIC

Gene CSPG5, Length 2,073 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSPG5-205	ENST00000610462	BRIP1	Q9BX63	1249 aa		32.65	■■■□□ 2.82
CSPG5-205	ENST00000610462	ZBTB22	O15209	634 aa		32.65	■■■□□ 2.82
CSPG5-205	ENST00000610462	POLR3D	P05423	398 aa	Predicted RBP	32.65	■■■□□ 2.82
CSPG5-205	ENST00000610462	ADRA2B	P18089	450 aa		32.65	■■■□□ 2.82
CSPG5-205	ENST00000610462	WTAP	Q15007	396 aa		32.65	■■■□□ 2.82
CSPG5-205	ENST00000610462	UBR3	Q6ZT12	1888 aa		32.64	■■■□□ 2.82
CSPG5-205	ENST00000610462	MINDY4B	A8MYZ0	360 aa		32.64	■■■□□ 2.82
CSPG5-205	ENST00000610462	ME1	P48163	572 aa		32.64	■■■□□ 2.82
CSPG5-205	ENST00000610462	TMTC2	Q8N394	836 aa		32.64	■■■□□ 2.82
CSPG5-205	ENST00000610462	PHKB	Q93100	1093 aa		32.64	■■■□□ 2.82
CSPG5-205	ENST00000610462	NSUN4	Q96CB9	384 aa	Known RBP	32.64	■■■□□ 2.82
CSPG5-205	ENST00000610462	LRRC4B	Q9NT99	713 aa		32.64	■■■□□ 2.82
CSPG5-205	ENST00000610462	POLR3E	Q9NVU0	708 aa		32.64	■■■□□ 2.82
CSPG5-205	ENST00000610462	STK36	Q9NRP7	1315 aa		32.64	■■■□□ 2.82
CSPG5-205	ENST00000610462	ERICH2	A1L162	156 aa		32.63	■■■□□ 2.81
CSPG5-205	ENST00000610462	KIF28P	B7ZC32	967 aa		32.63	■■■□□ 2.81
CSPG5-205	ENST00000610462	YEATS4	O95619	227 aa		32.63	■■■□□ 2.81
CSPG5-205	ENST00000610462	MSN	P26038	577 aa	Known RBP	32.63	■■■□□ 2.81
CSPG5-205	ENST00000610462	HSPA1L	P34931	641 aa		32.63	■■■□□ 2.81
CSPG5-205	ENST00000610462	AIFM3	Q96NN9	605 aa		32.63	■■■□□ 2.81
CSPG5-205	ENST00000610462	GOLPH3L	Q9H4A5	285 aa		32.63	■■■□□ 2.81
CSPG5-205	ENST00000610462	RANBP6	O60518	1105 aa	Known RBP	32.63	■■■□□ 2.81
CSPG5-205	ENST00000610462	CCDC73	Q6ZRK6	1079 aa		32.63	■■■□□ 2.81
CSPG5-205	ENST00000610462	LINC00301	Q8NCQ3	95 aa		32.63	■■■□□ 2.81
CSPG5-205	ENST00000610462	FAM200A	Q8TCP9	573 aa		32.63	■■■□□ 2.81
CSPG5-205	ENST00000610462	CERK	Q8TCT0	537 aa		32.63	■■■□□ 2.81
CSPG5-205	ENST00000610462	ZKSCAN3	Q9BRR0	538 aa		32.63	■■■□□ 2.81
CSPG5-205	ENST00000610462	STK11IP	Q8N1F8	1099 aa		32.62	■■■□□ 2.81
CSPG5-205	ENST00000610462	CLIC4	Q9Y696	253 aa		32.62	■■■□□ 2.81
CSPG5-205	ENST00000610462	IRS2	Q9Y4H2	1338 aa		32.62	■■■□□ 2.81
CSPG5-205	ENST00000610462	PCDHA7	Q9UN72	937 aa		32.62	■■■□□ 2.81
CSPG5-205	ENST00000610462	ADCY5	O95622	1261 aa		32.61	■■■□□ 2.81
CSPG5-205	ENST00000610462	MECOM	Q03112	1051 aa		32.61	■■■□□ 2.81
CSPG5-205	ENST00000610462	GRAP	Q13588	217 aa		32.61	■■■□□ 2.81
CSPG5-205	ENST00000610462	STK38	Q15208	465 aa		32.61	■■■□□ 2.81
CSPG5-205	ENST00000610462	KRT40	Q6A162	431 aa		32.61	■■■□□ 2.81
CSPG5-205	ENST00000610462	CNBD1	Q8NA66	436 aa		32.61	■■■□□ 2.81
CSPG5-205	ENST00000610462	GRAPL	Q8TC17	118 aa	Predicted RBP	32.61	■■■□□ 2.81
CSPG5-205	ENST00000610462	CTAGE5	O15320	804 aa		32.6	■■■□□ 2.81
CSPG5-205	ENST00000610462	SSRP1	Q08945	709 aa	Known RBP	32.6	■■■□□ 2.81
CSPG5-205	ENST00000610462	SNW1	Q13573	536 aa	Known RBP	32.6	■■■□□ 2.81
CSPG5-205	ENST00000610462	ADAL	Q6DHV7	355 aa		32.6	■■■□□ 2.81
CSPG5-205	ENST00000610462	SASS6	Q6UVJ0	657 aa		32.6	■■■□□ 2.81
CSPG5-205	ENST00000610462	ENGASE	Q8NFI3	743 aa		32.6	■■■□□ 2.81
CSPG5-205	ENST00000610462	KCNG4	Q8TDN1	519 aa		32.6	■■■□□ 2.81
CSPG5-205	ENST00000610462	ESR2	Q92731	530 aa		32.6	■■■□□ 2.81
CSPG5-205	ENST00000610462	DUOX1	Q9NRD9	1551 aa		32.6	■■■□□ 2.81
CSPG5-205	ENST00000610462	MYH2	Q9UKX2	1941 aa		32.6	■■■□□ 2.81
CSPG5-205	ENST00000610462	FMNL1	O95466	1100 aa	Predicted RBP	32.6	■■■□□ 2.81
CSPG5-205	ENST00000610462	IFNAR1	P17181	557 aa		32.6	■■■□□ 2.81
CSPG5-205	ENST00000610462	RCAN1	P53805	252 aa		32.6	■■■□□ 2.81
CSPG5-205	ENST00000610462	FAM160A1	Q05DH4	1040 aa		32.6	■■■□□ 2.81
CSPG5-205	ENST00000610462	TMED8	Q6PL24	325 aa	Predicted RBP	32.6	■■■□□ 2.81
CSPG5-205	ENST00000610462		A0A1W2PQ27	194 aa		32.59	■■■□□ 2.81
CSPG5-205	ENST00000610462		A0A1W2PQ64	194 aa		32.59	■■■□□ 2.81
CSPG5-205	ENST00000610462		A0A1W2PQD8	194 aa		32.59	■■■□□ 2.81
CSPG5-205	ENST00000610462	FSIP1	Q8NA03	581 aa		32.59	■■■□□ 2.81
CSPG5-205	ENST00000610462	KIAA1551	Q9HCM1	1747 aa		32.59	■■■□□ 2.81
CSPG5-205	ENST00000610462	CHAF1A	Q13111	956 aa	Predicted RBP	32.58	■■■□□ 2.81
CSPG5-205	ENST00000610462	TXNRD3	Q86VQ6	643 aa		32.58	■■■□□ 2.81
CSPG5-205	ENST00000610462	UBAC1	Q9BSL1	405 aa		32.58	■■■□□ 2.81
CSPG5-205	ENST00000610462	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	32.58	■■■□□ 2.81
CSPG5-205	ENST00000610462	RTN1	Q16799	776 aa		32.58	■■■□□ 2.81
CSPG5-205	ENST00000610462	SLC26A6	Q9BXS9	759 aa		32.58	■■■□□ 2.81
CSPG5-205	ENST00000610462	ZKSCAN5	Q9Y2L8	839 aa		32.58	■■■□□ 2.81
CSPG5-205	ENST00000610462	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	32.57	■■■□□ 2.8
CSPG5-205	ENST00000610462	PTMA	P06454	111 aa	Known RBP	32.57	■■■□□ 2.8
CSPG5-205	ENST00000610462	TRIM29	Q14134	588 aa		32.57	■■■□□ 2.8
CSPG5-205	ENST00000610462	SF3A1	Q15459	793 aa	Known RBP	32.57	■■■□□ 2.8
CSPG5-205	ENST00000610462	ANO6	Q4KMQ2	910 aa		32.57	■■■□□ 2.8
CSPG5-205	ENST00000610462	MRPS27	Q92552	414 aa	Known RBP	32.57	■■■□□ 2.8
CSPG5-205	ENST00000610462	WASF1	Q92558	559 aa		32.57	■■■□□ 2.8
CSPG5-205	ENST00000610462	ANO1	Q5XXA6	986 aa		32.57	■■■□□ 2.8
CSPG5-205	ENST00000610462	LEMD3	Q9Y2U8	911 aa		32.57	■■■□□ 2.8
CSPG5-205	ENST00000610462	LAMB1	P07942	1786 aa		32.56	■■■□□ 2.8
CSPG5-205	ENST00000610462	SPTLC2	O15270	562 aa		32.56	■■■□□ 2.8
CSPG5-205	ENST00000610462	PC	P11498	1178 aa	Known RBP	32.56	■■■□□ 2.8
CSPG5-205	ENST00000610462	SEC23A	Q15436	765 aa		32.56	■■■□□ 2.8
CSPG5-205	ENST00000610462	KIN	O60870	393 aa	Known RBP	32.55	■■■□□ 2.8
CSPG5-205	ENST00000610462	DLEC1	Q9Y238	1755 aa		32.55	■■■□□ 2.8
CSPG5-205	ENST00000610462	CCDC196	A0A1B0GTZ2	297 aa		32.55	■■■□□ 2.8
CSPG5-205	ENST00000610462	FGR	P09769	529 aa		32.55	■■■□□ 2.8
CSPG5-205	ENST00000610462	PRDX5	P30044	214 aa		32.55	■■■□□ 2.8
CSPG5-205	ENST00000610462	PRR5L	Q6MZQ0	368 aa		32.55	■■■□□ 2.8
CSPG5-205	ENST00000610462	CTR9	Q6PD62	1173 aa		32.55	■■■□□ 2.8
CSPG5-205	ENST00000610462	ZNF654	Q8IZM8	581 aa		32.55	■■■□□ 2.8
CSPG5-205	ENST00000610462	SMIM22	K7EJ46	135 aa		32.54	■■■□□ 2.8
CSPG5-205	ENST00000610462	CRNKL1	Q9BZJ0	848 aa	Known RBP	32.54	■■■□□ 2.8
CSPG5-205	ENST00000610462	ANKIB1	Q9P2G1	1089 aa		32.54	■■■□□ 2.8
CSPG5-205	ENST00000610462	TNKS	O95271	1327 aa		32.54	■■■□□ 2.8
CSPG5-205	ENST00000610462	CYP2D7	A0A087X1C5	515 aa		32.54	■■■□□ 2.8
CSPG5-205	ENST00000610462	SPTY2D1	Q68D10	685 aa	Predicted RBP	32.54	■■■□□ 2.8
CSPG5-205	ENST00000610462	U2AF2	P26368	475 aa	Known RBP eCLIP	32.53	■■■□□ 2.8
CSPG5-205	ENST00000610462	TRIM22	Q8IYM9	498 aa		32.53	■■■□□ 2.8
CSPG5-205	ENST00000610462	FMR1NB	Q8N0W7	255 aa	Predicted RBP	32.53	■■■□□ 2.8
CSPG5-205	ENST00000610462	CBX8	Q9HC52	389 aa		32.53	■■■□□ 2.8
CSPG5-205	ENST00000610462	AATF	Q9NY61	560 aa	Known RBP eCLIP	32.53	■■■□□ 2.8
CSPG5-205	ENST00000610462	AP5Z1	O43299	807 aa		32.52	■■■□□ 2.8
CSPG5-205	ENST00000610462	GNL2	Q13823	731 aa	Known RBP	32.52	■■■□□ 2.8
CSPG5-205	ENST00000610462	FANCB	Q8NB91	859 aa		32.52	■■■□□ 2.8

Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms