RNA–Protein interactions for RNA: ENST00000608440.5

CTCFL-218, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-218ENST00000608440 SIL1Q9H173 461 aa14.29□□□□□ -0.12
CTCFL-218ENST00000608440 GRIN2DO15399 1336 aa14.29□□□□□ -0.12
CTCFL-218ENST00000608440 CTAGE15A4D2H0 777 aa14.28□□□□□ -0.12
CTCFL-218ENST00000608440 FOXO3O43524 673 aa14.28□□□□□ -0.12
CTCFL-218ENST00000608440 ZMYND10O75800 440 aa14.28□□□□□ -0.12
CTCFL-218ENST00000608440 CTAGE8P0CG41 777 aa14.28□□□□□ -0.12
CTCFL-218ENST00000608440 NFE2L2Q16236 605 aa14.28□□□□□ -0.12
CTCFL-218ENST00000608440 CTAGE6Q86UF2 777 aa14.28□□□□□ -0.12
CTCFL-218ENST00000608440 CTAGE4Q8IX94 777 aa14.28□□□□□ -0.12
CTCFL-218ENST00000608440 ABTB2Q8N961 1025 aa14.28□□□□□ -0.12
CTCFL-218ENST00000608440 POLD4Q9HCU8 107 aa14.28□□□□□ -0.12
CTCFL-218ENST00000608440 SLC40A1Q9NP59 571 aa14.28□□□□□ -0.12
CTCFL-218ENST00000608440 USP31Q70CQ4 1352 aa14.28□□□□□ -0.12
CTCFL-218ENST00000608440 EIF2S2P20042 333 aaKnown RBP14.28□□□□□ -0.12
CTCFL-218ENST00000608440 PPFIA1Q13136 1202 aa14.28□□□□□ -0.12
CTCFL-218ENST00000608440 SNCBQ16143 134 aa14.28□□□□□ -0.12
CTCFL-218ENST00000608440 ZNF569Q5MCW4 686 aa14.28□□□□□ -0.12
CTCFL-218ENST00000608440 THEMIS2Q5TEJ8 643 aa14.28□□□□□ -0.12
CTCFL-218ENST00000608440 GSPT2Q8IYD1 628 aaKnown RBP14.28□□□□□ -0.12
CTCFL-218ENST00000608440 ENGASEQ8NFI3 743 aa14.28□□□□□ -0.12
CTCFL-218ENST00000608440 CRACR2AQ9BSW2 395 aa14.28□□□□□ -0.12
CTCFL-218ENST00000608440 STAP2Q9UGK3 403 aa14.28□□□□□ -0.12
CTCFL-218ENST00000608440 EPB41L2O43491 1005 aaKnown RBP14.28□□□□□ -0.12
CTCFL-218ENST00000608440 ATF3P18847 181 aa14.28□□□□□ -0.12
CTCFL-218ENST00000608440 SAAL1Q96ER3 474 aa14.28□□□□□ -0.12
CTCFL-218ENST00000608440 ZNF335Q9H4Z2 1342 aaPredicted RBP14.27□□□□□ -0.12
CTCFL-218ENST00000608440 FCHSD2O94868 740 aa14.27□□□□□ -0.12
CTCFL-218ENST00000608440 B4GALNT4Q76KP1 1039 aa14.27□□□□□ -0.12
CTCFL-218ENST00000608440 CCDC13Q8IYE1 715 aa14.27□□□□□ -0.12
CTCFL-218ENST00000608440 C3orf20Q8ND61 904 aa14.27□□□□□ -0.12
CTCFL-218ENST00000608440 LMBR1Q8WVP7 490 aa14.27□□□□□ -0.12
CTCFL-218ENST00000608440 KIAA1468Q9P260 1216 aa14.27□□□□□ -0.12
CTCFL-218ENST00000608440 C1orf167Q5SNV9 1468 aa14.27□□□□□ -0.13
CTCFL-218ENST00000608440 PPFIA3O75145 1194 aa14.27□□□□□ -0.13
CTCFL-218ENST00000608440 PYGLP06737 847 aa14.27□□□□□ -0.13
CTCFL-218ENST00000608440 PECAM1P16284 738 aaPredicted RBP14.27□□□□□ -0.13
CTCFL-218ENST00000608440 CDC25CP30307 473 aa14.27□□□□□ -0.13
CTCFL-218ENST00000608440 IL13P35225 146 aa14.27□□□□□ -0.13
CTCFL-218ENST00000608440 SMTNP53814 917 aa14.27□□□□□ -0.13
CTCFL-218ENST00000608440 TBC1D25Q3MII6 688 aa14.27□□□□□ -0.13
CTCFL-218ENST00000608440 MYSM1Q5VVJ2 828 aa14.27□□□□□ -0.13
CTCFL-218ENST00000608440 TRIM74Q86UV6 250 aa14.27□□□□□ -0.13
CTCFL-218ENST00000608440 TRIM73Q86UV7 250 aa14.27□□□□□ -0.13
CTCFL-218ENST00000608440 FAM228AQ86W67 206 aa14.27□□□□□ -0.13
CTCFL-218ENST00000608440 HINFPQ9BQA5 517 aa14.27□□□□□ -0.13
CTCFL-218ENST00000608440 MAP3K19Q56UN5 1328 aa14.26□□□□□ -0.13
CTCFL-218ENST00000608440 LRRC7Q96NW7 1537 aa14.26□□□□□ -0.13
CTCFL-218ENST00000608440 RASSF9O75901 435 aa14.26□□□□□ -0.13
CTCFL-218ENST00000608440 A1BGP04217 495 aa14.26□□□□□ -0.13
CTCFL-218ENST00000608440 ICA1Q05084 483 aa14.26□□□□□ -0.13
CTCFL-218ENST00000608440 PDCLQ13371 301 aa14.26□□□□□ -0.13
CTCFL-218ENST00000608440 SF3B2Q13435 895 aaKnown RBP14.26□□□□□ -0.13
CTCFL-218ENST00000608440 TLDC1Q6P9B6 456 aa14.26□□□□□ -0.13
CTCFL-218ENST00000608440 VSTM4Q8IW00 320 aa14.26□□□□□ -0.13
CTCFL-218ENST00000608440 USP28Q96RU2 1077 aa14.26□□□□□ -0.13
CTCFL-218ENST00000608440 ZEB2O60315 1214 aa14.26□□□□□ -0.13
CTCFL-218ENST00000608440 ARHGAP25P42331 645 aa14.26□□□□□ -0.13
CTCFL-218ENST00000608440 VIPAS39Q9H9C1 493 aa14.26□□□□□ -0.13
CTCFL-218ENST00000608440 AGPSO00116 658 aa14.25□□□□□ -0.13
CTCFL-218ENST00000608440 GNAI2P04899 355 aa14.25□□□□□ -0.13
CTCFL-218ENST00000608440 ZKSCAN1P17029 563 aaPredicted RBP14.25□□□□□ -0.13
CTCFL-218ENST00000608440 CCDC181Q5TID7 509 aa14.25□□□□□ -0.13
CTCFL-218ENST00000608440 NCAPH2Q6IBW4 605 aa14.25□□□□□ -0.13
CTCFL-218ENST00000608440 NFXL1Q6ZNB6 911 aa14.25□□□□□ -0.13
CTCFL-218ENST00000608440 PARP9Q8IXQ6 854 aa14.25□□□□□ -0.13
CTCFL-218ENST00000608440 KIF5CO60282 957 aa14.25□□□□□ -0.13
CTCFL-218ENST00000608440 GIGYF1O75420 1035 aaPredicted RBP14.25□□□□□ -0.13
CTCFL-218ENST00000608440 ACCSLQ4AC99 568 aa14.25□□□□□ -0.13
CTCFL-218ENST00000608440 HSP90AB2PQ58FF8 381 aa14.25□□□□□ -0.13
CTCFL-218ENST00000608440 RPUSD2Q8IZ73 545 aaKnown RBP14.25□□□□□ -0.13
CTCFL-218ENST00000608440 KLHL23Q8NBE8 558 aa14.25□□□□□ -0.13
CTCFL-218ENST00000608440 HSD3B7Q9H2F3 369 aa14.25□□□□□ -0.13
CTCFL-218ENST00000608440 VCPKMTQ9H867 229 aa14.25□□□□□ -0.13
CTCFL-218ENST00000608440 ZC3H4Q9UPT8 1303 aaKnown RBP14.25□□□□□ -0.13
CTCFL-218ENST00000608440 PEAK1Q9H792 1746 aa14.24□□□□□ -0.13
CTCFL-218ENST00000608440 SOWAHDA6NJG2 315 aa14.24□□□□□ -0.13
CTCFL-218ENST00000608440 PFKFB2O60825 505 aa14.24□□□□□ -0.13
CTCFL-218ENST00000608440 RAB27AP51159 221 aa14.24□□□□□ -0.13
CTCFL-218ENST00000608440 NDUFA8P51970 172 aa14.24□□□□□ -0.13
CTCFL-218ENST00000608440 RCOR1Q9UKL0 485 aa14.24□□□□□ -0.13
CTCFL-218ENST00000608440 MST1RQ04912 1400 aa14.24□□□□□ -0.13
CTCFL-218ENST00000608440 CTAGE9A4FU28 777 aa14.24□□□□□ -0.13
CTCFL-218ENST00000608440 CBFA2T2O43439 604 aa14.24□□□□□ -0.13
CTCFL-218ENST00000608440 SLC4A2P04920 1241 aa14.24□□□□□ -0.13
CTCFL-218ENST00000608440 IFT88Q13099 833 aa14.24□□□□□ -0.13
CTCFL-218ENST00000608440 LMOD2Q6P5Q4 547 aa14.24□□□□□ -0.13
CTCFL-218ENST00000608440 CNTROBQ8N137 903 aa14.24□□□□□ -0.13
CTCFL-218ENST00000608440 COG1Q8WTW3 980 aa14.24□□□□□ -0.13
CTCFL-218ENST00000608440 TBC1D31Q96DN5 1066 aa14.24□□□□□ -0.13
CTCFL-218ENST00000608440 CCDC114Q96M63 670 aa14.24□□□□□ -0.13
CTCFL-218ENST00000608440 YIPF3Q9GZM5 350 aa14.24□□□□□ -0.13
CTCFL-218ENST00000608440 STX10O60499 249 aa14.23□□□□□ -0.13
CTCFL-218ENST00000608440 ADD1P35611 737 aaKnown RBP14.23□□□□□ -0.13
CTCFL-218ENST00000608440 EIF4A2Q14240 407 aaKnown RBP14.23□□□□□ -0.13
CTCFL-218ENST00000608440 CDCA2Q69YH5 1023 aaPredicted RBP14.23□□□□□ -0.13
CTCFL-218ENST00000608440 SLC35F6Q8N357 371 aa14.23□□□□□ -0.13
CTCFL-218ENST00000608440 RSRC1Q96IZ7 334 aaKnown RBP14.23□□□□□ -0.13
CTCFL-218ENST00000608440 TPX2Q9ULW0 747 aaKnown RBP14.23□□□□□ -0.13
CTCFL-218ENST00000608440 ANKRD18BA2A2Z9 1011 aa14.23□□□□□ -0.13
CTCFL-218ENST00000608440 SLC3A2P08195 630 aaKnown RBP14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms