RNA–Protein interactions for RNA: ENST00000608100.5

KNSTRN-216, Transcript of kinetochore localized astrin (SPAG5) binding protein, humanhuman

TSL 1 (best) BASIC

Gene KNSTRN, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNSTRN-216ENST00000608100 C8orf76Q96K31 380 aa13.17□□□□□ -0.3
KNSTRN-216ENST00000608100 FUCA2Q9BTY2 467 aa13.17□□□□□ -0.3
KNSTRN-216ENST00000608100 SENP2Q9HC62 589 aa13.17□□□□□ -0.3
KNSTRN-216ENST00000608100 RTEL1Q9NZ71 1219 aa13.17□□□□□ -0.3
KNSTRN-216ENST00000608100 ANKIB1Q9P2G1 1089 aa13.17□□□□□ -0.3
KNSTRN-216ENST00000608100 SLC12A7Q9Y666 1083 aa13.17□□□□□ -0.3
KNSTRN-216ENST00000608100 STK36Q9NRP7 1315 aa13.17□□□□□ -0.3
KNSTRN-216ENST00000608100 ORC4O43929 436 aa13.16□□□□□ -0.3
KNSTRN-216ENST00000608100 IL1R1P14778 569 aa13.16□□□□□ -0.3
KNSTRN-216ENST00000608100 CDC27P30260 824 aa13.16□□□□□ -0.3
KNSTRN-216ENST00000608100 DYNLL1P63167 89 aaKnown RBP13.16□□□□□ -0.3
KNSTRN-216ENST00000608100 DDR1Q08345 913 aa13.16□□□□□ -0.3
KNSTRN-216ENST00000608100 SEC23AQ15436 765 aa13.16□□□□□ -0.3
KNSTRN-216ENST00000608100 CTR9Q6PD62 1173 aa13.16□□□□□ -0.3
KNSTRN-216ENST00000608100 RBM43Q6ZSC3 357 aaKnown RBP13.16□□□□□ -0.3
KNSTRN-216ENST00000608100 ZNF804AQ7Z570 1209 aa13.16□□□□□ -0.3
KNSTRN-216ENST00000608100 SDR42E1Q8WUS8 393 aa13.16□□□□□ -0.3
KNSTRN-216ENST00000608100 ANP32BQ92688 251 aaKnown RBP13.16□□□□□ -0.3
KNSTRN-216ENST00000608100 PDLIM2Q96JY6 352 aa13.16□□□□□ -0.3
KNSTRN-216ENST00000608100 CRNKL1Q9BZJ0 848 aaKnown RBP13.16□□□□□ -0.3
KNSTRN-216ENST00000608100 DDX19AQ9NUU7 478 aaKnown RBP13.16□□□□□ -0.3
KNSTRN-216ENST00000608100 TNRC6CQ9HCJ0 1690 aaKnown RBP13.16□□□□□ -0.3
KNSTRN-216ENST00000608100 CCDC196A0A1B0GTZ2 297 aa13.16□□□□□ -0.3
KNSTRN-216ENST00000608100 GOLGA6L4A6NEF3 574 aa13.16□□□□□ -0.3
KNSTRN-216ENST00000608100 CCDC69A6NI79 296 aa13.16□□□□□ -0.3
KNSTRN-216ENST00000608100 GPSM2P81274 684 aa13.16□□□□□ -0.3
KNSTRN-216ENST00000608100 SYNE3Q6ZMZ3 975 aa13.16□□□□□ -0.3
KNSTRN-216ENST00000608100 CERS3Q8IU89 383 aa13.16□□□□□ -0.3
KNSTRN-216ENST00000608100 DCP1AQ9NPI6 582 aaPredicted RBP13.16□□□□□ -0.3
KNSTRN-216ENST00000608100 MKRN1Q9UHC7 482 aaKnown RBP13.16□□□□□ -0.3
KNSTRN-216ENST00000608100 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.16□□□□□ -0.3
KNSTRN-216ENST00000608100 BRWD3Q6RI45 1802 aa13.15□□□□□ -0.3
KNSTRN-216ENST00000608100 ERICH2A1L162 156 aa13.15□□□□□ -0.3
KNSTRN-216ENST00000608100 LDHCP07864 332 aa13.15□□□□□ -0.3
KNSTRN-216ENST00000608100 PRDX5P30044 214 aa13.15□□□□□ -0.3
KNSTRN-216ENST00000608100 GSTO1P78417 241 aa13.15□□□□□ -0.3
KNSTRN-216ENST00000608100 WTAPQ15007 396 aa13.15□□□□□ -0.3
KNSTRN-216ENST00000608100 NFXL1Q6ZNB6 911 aa13.15□□□□□ -0.3
KNSTRN-216ENST00000608100 SP8Q8IXZ3 490 aa13.15□□□□□ -0.3
KNSTRN-216ENST00000608100 FAM163AQ96GL9 167 aaPredicted RBP13.15□□□□□ -0.3
KNSTRN-216ENST00000608100 USP28Q96RU2 1077 aa13.15□□□□□ -0.3
KNSTRN-216ENST00000608100 GOLGA8AA7E2F4 631 aa13.14□□□□□ -0.31
KNSTRN-216ENST00000608100 MINDY4BA8MYZ0 360 aa13.14□□□□□ -0.31
KNSTRN-216ENST00000608100 USP17L12C9JPN9 530 aa13.14□□□□□ -0.31
KNSTRN-216ENST00000608100 USP17L21D6R901 530 aa13.14□□□□□ -0.31
KNSTRN-216ENST00000608100 FMNL1O95466 1100 aaPredicted RBP13.14□□□□□ -0.31
KNSTRN-216ENST00000608100 YEATS4O95619 227 aa13.14□□□□□ -0.31
KNSTRN-216ENST00000608100 LDHBP07195 334 aaKnown RBP13.14□□□□□ -0.31
KNSTRN-216ENST00000608100 LIG1P18858 919 aa13.14□□□□□ -0.31
KNSTRN-216ENST00000608100 IARSP41252 1262 aaKnown RBP13.14□□□□□ -0.31
KNSTRN-216ENST00000608100 KIF23Q02241 960 aaPredicted RBP13.14□□□□□ -0.31
KNSTRN-216ENST00000608100 HS1BP3Q53T59 392 aa13.14□□□□□ -0.31
KNSTRN-216ENST00000608100 FAM43AQ8N2R8 423 aa13.14□□□□□ -0.31
KNSTRN-216ENST00000608100 WASF1Q92558 559 aa13.14□□□□□ -0.31
KNSTRN-216ENST00000608100 CD209Q9NNX6 404 aa13.14□□□□□ -0.31
KNSTRN-216ENST00000608100 POLR3EQ9NVU0 708 aa13.14□□□□□ -0.31
KNSTRN-216ENST00000608100 GGA1Q9UJY5 639 aa13.14□□□□□ -0.31
KNSTRN-216ENST00000608100 A0A1W2PQ27 194 aa13.13□□□□□ -0.31
KNSTRN-216ENST00000608100 A0A1W2PQ64 194 aa13.13□□□□□ -0.31
KNSTRN-216ENST00000608100 A0A1W2PQD8 194 aa13.13□□□□□ -0.31
KNSTRN-216ENST00000608100 U2AF2P26368 475 aaKnown RBP eCLIP13.13□□□□□ -0.31
KNSTRN-216ENST00000608100 CHAF1AQ13111 956 aaPredicted RBP13.13□□□□□ -0.31
KNSTRN-216ENST00000608100 FANCBQ8NB91 859 aa13.13□□□□□ -0.31
KNSTRN-216ENST00000608100 ALG1Q9BT22 464 aa13.13□□□□□ -0.31
KNSTRN-216ENST00000608100 ARPP21Q9UBL0 812 aaPredicted RBP13.13□□□□□ -0.31
KNSTRN-216ENST00000608100 RANBP6O60518 1105 aaKnown RBP13.12□□□□□ -0.31
KNSTRN-216ENST00000608100 SLC3A2P08195 630 aaKnown RBP13.12□□□□□ -0.31
KNSTRN-216ENST00000608100 SSRP1Q08945 709 aaKnown RBP13.12□□□□□ -0.31
KNSTRN-216ENST00000608100 MYSM1Q5VVJ2 828 aa13.12□□□□□ -0.31
KNSTRN-216ENST00000608100 KRT40Q6A162 431 aa13.12□□□□□ -0.31
KNSTRN-216ENST00000608100 ADALQ6DHV7 355 aa13.12□□□□□ -0.31
KNSTRN-216ENST00000608100 NBPF11Q86T75 865 aa13.12□□□□□ -0.31
KNSTRN-216ENST00000608100 MICU3Q86XE3 530 aa13.12□□□□□ -0.31
KNSTRN-216ENST00000608100 COL23A1Q86Y22 540 aaPredicted RBP13.12□□□□□ -0.31
KNSTRN-216ENST00000608100 CRACR2BQ8N4Y2 399 aaPredicted RBP13.12□□□□□ -0.31
KNSTRN-216ENST00000608100 LINC00301Q8NCQ3 95 aa13.12□□□□□ -0.31
KNSTRN-216ENST00000608100 TBC1D16Q8TBP0 767 aa13.12□□□□□ -0.31
KNSTRN-216ENST00000608100 ANKS1AQ92625 1134 aa13.12□□□□□ -0.31
KNSTRN-216ENST00000608100 ZSCAN10Q96SZ4 725 aaPredicted RBP13.12□□□□□ -0.31
KNSTRN-216ENST00000608100 UBAC1Q9BSL1 405 aa13.12□□□□□ -0.31
KNSTRN-216ENST00000608100 NUP62CLQ9H1M0 184 aa13.12□□□□□ -0.31
KNSTRN-216ENST00000608100 CLSTN2Q9H4D0 955 aa13.12□□□□□ -0.31
KNSTRN-216ENST00000608100 AATFQ9NY61 560 aaKnown RBP eCLIP13.12□□□□□ -0.31
KNSTRN-216ENST00000608100 DACT1Q9NYF0 836 aa13.12□□□□□ -0.31
KNSTRN-216ENST00000608100 FAM205AQ6ZU69 1335 aa13.12□□□□□ -0.31
KNSTRN-216ENST00000608100 CHD4Q14839 1912 aa13.12□□□□□ -0.31
KNSTRN-216ENST00000608100 BAG3O95817 575 aa13.11□□□□□ -0.31
KNSTRN-216ENST00000608100 GUCY1B3Q02153 619 aa13.11□□□□□ -0.31
KNSTRN-216ENST00000608100 MAP3K11Q16584 847 aa13.11□□□□□ -0.31
KNSTRN-216ENST00000608100 RTN1Q16799 776 aa13.11□□□□□ -0.31
KNSTRN-216ENST00000608100 RRP12Q5JTH9 1297 aaKnown RBP13.11□□□□□ -0.31
KNSTRN-216ENST00000608100 OTUD7BQ6GQQ9 843 aa13.11□□□□□ -0.31
KNSTRN-216ENST00000608100 IQCA1Q86XH1 822 aa13.11□□□□□ -0.31
KNSTRN-216ENST00000608100 DZIP1Q86YF9 867 aaKnown RBP13.11□□□□□ -0.31
KNSTRN-216ENST00000608100 ZNF654Q8IZM8 581 aa13.11□□□□□ -0.31
KNSTRN-216ENST00000608100 ENAHQ8N8S7 591 aaPredicted RBP13.11□□□□□ -0.31
KNSTRN-216ENST00000608100 ENGASEQ8NFI3 743 aa13.11□□□□□ -0.31
KNSTRN-216ENST00000608100 KCNG4Q8TDN1 519 aa13.11□□□□□ -0.31
KNSTRN-216ENST00000608100 POLLQ9UGP5 575 aa13.11□□□□□ -0.31
KNSTRN-216ENST00000608100 ATP6V0A2Q9Y487 856 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms