RNA–Protein interactions for RNA: ENST00000606394.5

CTSA-212, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-212ENST00000606394 LRCH3Q96II8 777 aa16.72■□□□□ 0.27
CTSA-212ENST00000606394 DEFB118Q96PH6 123 aa16.72■□□□□ 0.27
CTSA-212ENST00000606394 GDF15Q99988 308 aa16.72■□□□□ 0.27
CTSA-212ENST00000606394 PICK1Q9NRD5 415 aa16.72■□□□□ 0.27
CTSA-212ENST00000606394 STAP2Q9UGK3 403 aa16.72■□□□□ 0.27
CTSA-212ENST00000606394 DAGLAQ9Y4D2 1042 aa16.72■□□□□ 0.27
CTSA-212ENST00000606394 ELNP15502 786 aa16.71■□□□□ 0.27
CTSA-212ENST00000606394 FGFR2P21802 821 aa16.71■□□□□ 0.27
CTSA-212ENST00000606394 NFIAQ12857 509 aa16.71■□□□□ 0.27
CTSA-212ENST00000606394 SCYL3Q8IZE3 742 aa16.71■□□□□ 0.27
CTSA-212ENST00000606394 SUPT16HQ9Y5B9 1047 aaKnown RBP16.71■□□□□ 0.27
CTSA-212ENST00000606394 ZHX2Q9Y6X8 837 aa16.71■□□□□ 0.27
CTSA-212ENST00000606394 ATRNL1Q5VV63 1379 aa16.7■□□□□ 0.26
CTSA-212ENST00000606394 PHF20L1A8MW92 1017 aa16.7■□□□□ 0.26
CTSA-212ENST00000606394 NEFLP07196 543 aa16.7■□□□□ 0.26
CTSA-212ENST00000606394 PTPRAP18433 802 aa16.7■□□□□ 0.26
CTSA-212ENST00000606394 ANKRD44Q8N8A2 993 aa16.7■□□□□ 0.26
CTSA-212ENST00000606394 SMCR8Q8TEV9 937 aaPredicted RBP16.7■□□□□ 0.26
CTSA-212ENST00000606394 COA7Q96BR5 231 aa16.7■□□□□ 0.26
CTSA-212ENST00000606394 PAWRQ96IZ0 340 aaKnown RBP16.7■□□□□ 0.26
CTSA-212ENST00000606394 FAM198AQ9UFP1 575 aa16.7■□□□□ 0.26
CTSA-212ENST00000606394 AFG3L2Q9Y4W6 797 aa16.7■□□□□ 0.26
CTSA-212ENST00000606394 MYH13Q9UKX3 1938 aa16.69■□□□□ 0.26
CTSA-212ENST00000606394 SLC5A1P13866 664 aa16.69■□□□□ 0.26
CTSA-212ENST00000606394 MAP3K10Q02779 954 aa16.69■□□□□ 0.26
CTSA-212ENST00000606394 LRIT3Q3SXY7 679 aa16.69■□□□□ 0.26
CTSA-212ENST00000606394 CCDC184Q52MB2 194 aa16.69■□□□□ 0.26
CTSA-212ENST00000606394 LPIN2Q92539 896 aa16.69■□□□□ 0.26
CTSA-212ENST00000606394 ENTPD3O75355 529 aa16.68■□□□□ 0.26
CTSA-212ENST00000606394 DIXDC1Q155Q3 683 aa16.68■□□□□ 0.26
CTSA-212ENST00000606394 GADL1Q6ZQY3 521 aa16.68■□□□□ 0.26
CTSA-212ENST00000606394 IDI2Q9BXS1 227 aa16.68■□□□□ 0.26
CTSA-212ENST00000606394 USP40Q9NVE5 1235 aa16.68■□□□□ 0.26
CTSA-212ENST00000606394 STXBP5LQ9Y2K9 1186 aa16.68■□□□□ 0.26
CTSA-212ENST00000606394 ZBED9Q6R2W3 1325 aa16.68■□□□□ 0.26
CTSA-212ENST00000606394 SALL1Q9NSC2 1324 aa16.68■□□□□ 0.26
CTSA-212ENST00000606394 ALPK3Q96L96 1907 aa16.67■□□□□ 0.26
CTSA-212ENST00000606394 ZBTB22O15209 634 aa16.67■□□□□ 0.26
CTSA-212ENST00000606394 CTNND1O60716 968 aaKnown RBP16.67■□□□□ 0.26
CTSA-212ENST00000606394 LDHBP07195 334 aaKnown RBP16.67■□□□□ 0.26
CTSA-212ENST00000606394 FAM110CQ1W6H9 321 aa16.67■□□□□ 0.26
CTSA-212ENST00000606394 FAM9BQ8IZU0 186 aa16.67■□□□□ 0.26
CTSA-212ENST00000606394 DEFB123Q8N688 67 aa16.67■□□□□ 0.26
CTSA-212ENST00000606394 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.67■□□□□ 0.26
CTSA-212ENST00000606394 GNL3LQ9NVN8 582 aaKnown RBP16.67■□□□□ 0.26
CTSA-212ENST00000606394 PNMA3Q9UL41 463 aa16.67■□□□□ 0.26
CTSA-212ENST00000606394 AGTPBP1Q9UPW5 1226 aa16.67■□□□□ 0.26
CTSA-212ENST00000606394 PTPRFP10586 1907 aa16.66■□□□□ 0.26
CTSA-212ENST00000606394 DOCK2Q92608 1830 aa16.66■□□□□ 0.26
CTSA-212ENST00000606394 PRDX5P30044 214 aa16.66■□□□□ 0.26
CTSA-212ENST00000606394 DOCK3Q8IZD9 2030 aa16.66■□□□□ 0.26
CTSA-212ENST00000606394 NBPF3Q9H094 633 aa16.66■□□□□ 0.26
CTSA-212ENST00000606394 LRRFIP2Q9Y608 721 aaKnown RBP16.66■□□□□ 0.26
CTSA-212ENST00000606394 LAMA2P24043 3122 aaKnown RBP16.65■□□□□ 0.26
CTSA-212ENST00000606394 EYA2O00167 538 aa16.65■□□□□ 0.26
CTSA-212ENST00000606394 SEMA3EO15041 775 aa16.65■□□□□ 0.26
CTSA-212ENST00000606394 HMGCRP04035 888 aa16.65■□□□□ 0.26
CTSA-212ENST00000606394 ZFPM1Q8IX07 1006 aa16.65■□□□□ 0.26
CTSA-212ENST00000606394 KLHDC4Q8TBB5 520 aa16.65■□□□□ 0.26
CTSA-212ENST00000606394 GCLCP48506 637 aaPredicted RBP16.64■□□□□ 0.25
CTSA-212ENST00000606394 RGS3P49796 1198 aa16.64■□□□□ 0.25
CTSA-212ENST00000606394 C7orf61Q8IZ16 206 aa16.64■□□□□ 0.25
CTSA-212ENST00000606394 TDHQ8IZJ6 230 aa16.64■□□□□ 0.25
CTSA-212ENST00000606394 ZGPATQ8N5A5 531 aaKnown RBP16.64■□□□□ 0.25
CTSA-212ENST00000606394 ANKRD13CQ8N6S4 541 aa16.64■□□□□ 0.25
CTSA-212ENST00000606394 PROCA1Q8NCQ7 364 aaPredicted RBP16.64■□□□□ 0.25
CTSA-212ENST00000606394 DIS3LQ8TF46 1054 aaKnown RBP16.64■□□□□ 0.25
CTSA-212ENST00000606394 SPINK5Q9NQ38 1064 aaPredicted RBP16.64■□□□□ 0.25
CTSA-212ENST00000606394 FBXO3Q9UK99 471 aa16.64■□□□□ 0.25
CTSA-212ENST00000606394 TAOK2Q9UL54 1235 aa16.64■□□□□ 0.25
CTSA-212ENST00000606394 DENND2AQ9ULE3 1009 aa16.64■□□□□ 0.25
CTSA-212ENST00000606394 RPTORQ8N122 1335 aa16.64■□□□□ 0.25
CTSA-212ENST00000606394 RFX7Q2KHR2 1363 aa16.64■□□□□ 0.25
CTSA-212ENST00000606394 DOCK1Q14185 1865 aa16.63■□□□□ 0.25
CTSA-212ENST00000606394 SLF2Q8IX21 1173 aa16.63■□□□□ 0.25
CTSA-212ENST00000606394 TBC1D2Q9BYX2 928 aa16.63■□□□□ 0.25
CTSA-212ENST00000606394 HMX1Q9NP08 348 aaPredicted RBP16.63■□□□□ 0.25
CTSA-212ENST00000606394 GAKO14976 1311 aa16.63■□□□□ 0.25
CTSA-212ENST00000606394 PHIPQ8WWQ0 1821 aa16.63■□□□□ 0.25
CTSA-212ENST00000606394 TRIM75PA6NK02 468 aa16.62■□□□□ 0.25
CTSA-212ENST00000606394 PABPC4Q13310 644 aaKnown RBP eCLIP16.62■□□□□ 0.25
CTSA-212ENST00000606394 ZSCAN29Q8IWY8 852 aaPredicted RBP16.62■□□□□ 0.25
CTSA-212ENST00000606394 FAM163AQ96GL9 167 aaPredicted RBP16.62■□□□□ 0.25
CTSA-212ENST00000606394 MTMR10Q9NXD2 777 aa16.62■□□□□ 0.25
CTSA-212ENST00000606394 ZMYND8Q9ULU4 1186 aaPredicted RBP16.62■□□□□ 0.25
CTSA-212ENST00000606394 PTPRCP08575 1304 aa16.62■□□□□ 0.25
CTSA-212ENST00000606394 VCANP13611 3396 aa16.61■□□□□ 0.25
CTSA-212ENST00000606394 TBC1D12O60347 775 aa16.61■□□□□ 0.25
CTSA-212ENST00000606394 NPM3O75607 178 aaKnown RBP16.61■□□□□ 0.25
CTSA-212ENST00000606394 MAGEA10P43363 369 aaPredicted RBP16.61■□□□□ 0.25
CTSA-212ENST00000606394 RFX5P48382 616 aaPredicted RBP16.61■□□□□ 0.25
CTSA-212ENST00000606394 SH3BP5LQ7L8J4 393 aa16.61■□□□□ 0.25
CTSA-212ENST00000606394 USP44Q9H0E7 712 aa16.61■□□□□ 0.25
CTSA-212ENST00000606394 C11orf49Q9H6J7 331 aa16.61■□□□□ 0.25
CTSA-212ENST00000606394 GJD2Q9UKL4 321 aa16.61■□□□□ 0.25
CTSA-212ENST00000606394 OGDHLQ9ULD0 1010 aa16.61■□□□□ 0.25
CTSA-212ENST00000606394 CIAO1O76071 339 aa16.6■□□□□ 0.25
CTSA-212ENST00000606394 ATP2B3Q16720 1220 aa16.6■□□□□ 0.25
CTSA-212ENST00000606394 Q7L0L9 218 aa16.6■□□□□ 0.25
CTSA-212ENST00000606394 ATG9AQ7Z3C6 839 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms