RNA–Protein interactions for RNA: ENST00000605551.2

SRGAP2D-201, Transcript of SLIT-ROBO Rho GTPase activating protein 2D (pseudogene), humanhuman

BASIC

Gene SRGAP2D, Length 1,021 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2D-201ENST00000605551 FCGRTP55899 365 aa11.12□□□□□ -0.63
SRGAP2D-201ENST00000605551 TFCP2Q12800 502 aa11.12□□□□□ -0.63
SRGAP2D-201ENST00000605551 ATF7IPQ6VMQ6 1270 aa11.12□□□□□ -0.63
SRGAP2D-201ENST00000605551 FTSJ3Q8IY81 847 aaKnown RBP11.12□□□□□ -0.63
SRGAP2D-201ENST00000605551 SMCR8Q8TEV9 937 aaPredicted RBP11.12□□□□□ -0.63
SRGAP2D-201ENST00000605551 RAI14Q9P0K7 980 aa11.12□□□□□ -0.63
SRGAP2D-201ENST00000605551 FAM198AQ9UFP1 575 aa11.12□□□□□ -0.63
SRGAP2D-201ENST00000605551 CPA4Q9UI42 421 aa11.12□□□□□ -0.63
SRGAP2D-201ENST00000605551 DOCK1Q14185 1865 aa11.11□□□□□ -0.63
SRGAP2D-201ENST00000605551 CTNND1O60716 968 aaKnown RBP11.11□□□□□ -0.63
SRGAP2D-201ENST00000605551 PSMC4P43686 418 aa11.11□□□□□ -0.63
SRGAP2D-201ENST00000605551 TIMM10P62072 90 aa11.11□□□□□ -0.63
SRGAP2D-201ENST00000605551 UBXN2AP68543 259 aa11.11□□□□□ -0.63
SRGAP2D-201ENST00000605551 ZKSCAN2Q63HK3 967 aa11.11□□□□□ -0.63
SRGAP2D-201ENST00000605551 C17orf99Q6UX52 265 aa11.11□□□□□ -0.63
SRGAP2D-201ENST00000605551 GADL1Q6ZQY3 521 aa11.11□□□□□ -0.63
SRGAP2D-201ENST00000605551 SPATA5Q8NB90 893 aa11.11□□□□□ -0.63
SRGAP2D-201ENST00000605551 NKX2-3Q8TAU0 364 aa11.11□□□□□ -0.63
SRGAP2D-201ENST00000605551 FAM163AQ96GL9 167 aaPredicted RBP11.11□□□□□ -0.63
SRGAP2D-201ENST00000605551 TRIM34Q9BYJ4 488 aa11.11□□□□□ -0.63
SRGAP2D-201ENST00000605551 BIN2Q9UBW5 565 aaPredicted RBP11.11□□□□□ -0.63
SRGAP2D-201ENST00000605551 PNMA3Q9UL41 463 aa11.11□□□□□ -0.63
SRGAP2D-201ENST00000605551 ZHX2Q9Y6X8 837 aa11.11□□□□□ -0.63
SRGAP2D-201ENST00000605551 MYPNQ86TC9 1320 aa11.1□□□□□ -0.63
SRGAP2D-201ENST00000605551 ECM2O94769 699 aaPredicted RBP11.1□□□□□ -0.63
SRGAP2D-201ENST00000605551 BAG3O95817 575 aa11.1□□□□□ -0.63
SRGAP2D-201ENST00000605551 TRIM27P14373 513 aa11.1□□□□□ -0.63
SRGAP2D-201ENST00000605551 PLCG2P16885 1265 aa11.1□□□□□ -0.63
SRGAP2D-201ENST00000605551 PABPC4Q13310 644 aaKnown RBP eCLIP11.1□□□□□ -0.63
SRGAP2D-201ENST00000605551 CCDC158Q5M9N0 1113 aa11.1□□□□□ -0.63
SRGAP2D-201ENST00000605551 TRIM47Q96LD4 638 aa11.1□□□□□ -0.63
SRGAP2D-201ENST00000605551 TBC1D2Q9BYX2 928 aa11.1□□□□□ -0.63
SRGAP2D-201ENST00000605551 LRP2BPQ9P2M1 347 aa11.1□□□□□ -0.63
SRGAP2D-201ENST00000605551 SRRDQ9UH36 339 aa11.1□□□□□ -0.63
SRGAP2D-201ENST00000605551 SLC45A1Q9Y2W3 748 aa11.1□□□□□ -0.63
SRGAP2D-201ENST00000605551 RFX7Q2KHR2 1363 aa11.09□□□□□ -0.63
SRGAP2D-201ENST00000605551 GPR75-ASB3A0A0A6YYF3 556 aa11.09□□□□□ -0.63
SRGAP2D-201ENST00000605551 A0A0G2JLL6 359 aaPredicted RBP11.09□□□□□ -0.63
SRGAP2D-201ENST00000605551 NPM3O75607 178 aaKnown RBP11.09□□□□□ -0.63
SRGAP2D-201ENST00000605551 MYCP01106 439 aaPredicted RBP11.09□□□□□ -0.63
SRGAP2D-201ENST00000605551 EN2P19622 333 aaPredicted RBP11.09□□□□□ -0.63
SRGAP2D-201ENST00000605551 GRK4P32298 578 aa11.09□□□□□ -0.63
SRGAP2D-201ENST00000605551 MECOMQ03112 1051 aa11.09□□□□□ -0.63
SRGAP2D-201ENST00000605551 TTC39AQ5SRH9 613 aa11.09□□□□□ -0.63
SRGAP2D-201ENST00000605551 PRRT2Q7Z6L0 340 aaPredicted RBP11.09□□□□□ -0.63
SRGAP2D-201ENST00000605551 SH3TC2Q8TF17 1288 aa11.09□□□□□ -0.63
SRGAP2D-201ENST00000605551 CLUAP1Q96AJ1 413 aa11.09□□□□□ -0.63
SRGAP2D-201ENST00000605551 ARHGAP39Q9C0H5 1083 aa11.09□□□□□ -0.63
SRGAP2D-201ENST00000605551 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.09□□□□□ -0.63
SRGAP2D-201ENST00000605551 AS3MTQ9HBK9 375 aa11.09□□□□□ -0.63
SRGAP2D-201ENST00000605551 COL2A1P02458 1487 aaPredicted RBP11.08□□□□□ -0.64
SRGAP2D-201ENST00000605551 ATRNL1Q5VV63 1379 aa11.08□□□□□ -0.64
SRGAP2D-201ENST00000605551 TRIM75PA6NK02 468 aa11.08□□□□□ -0.64
SRGAP2D-201ENST00000605551 IGSF3O75054 1194 aa11.08□□□□□ -0.64
SRGAP2D-201ENST00000605551 PTPRAP18433 802 aa11.08□□□□□ -0.64
SRGAP2D-201ENST00000605551 OSBPP22059 807 aa11.08□□□□□ -0.64
SRGAP2D-201ENST00000605551 ARID4AP29374 1257 aaPredicted RBP11.08□□□□□ -0.64
SRGAP2D-201ENST00000605551 TEX11Q8IYF3 940 aa11.08□□□□□ -0.64
SRGAP2D-201ENST00000605551 SLAIN1Q8ND83 568 aa11.08□□□□□ -0.64
SRGAP2D-201ENST00000605551 OSBPL5Q9H0X9 879 aaPredicted RBP11.08□□□□□ -0.64
SRGAP2D-201ENST00000605551 GPR108Q9NPR9 543 aa11.08□□□□□ -0.64
SRGAP2D-201ENST00000605551 HMG20BQ9P0W2 317 aa11.08□□□□□ -0.64
SRGAP2D-201ENST00000605551 MAST2Q6P0Q8 1798 aa11.08□□□□□ -0.64
SRGAP2D-201ENST00000605551 DDTLA6NHG4 134 aaPredicted RBP11.07□□□□□ -0.64
SRGAP2D-201ENST00000605551 TNPO2O14787 897 aaKnown RBP11.07□□□□□ -0.64
SRGAP2D-201ENST00000605551 TBC1D12O60347 775 aa11.07□□□□□ -0.64
SRGAP2D-201ENST00000605551 CYP2C8P10632 490 aa11.07□□□□□ -0.64
SRGAP2D-201ENST00000605551 NAA16Q6N069 864 aaPredicted RBP11.07□□□□□ -0.64
SRGAP2D-201ENST00000605551 ITPRIPQ8IWB1 547 aa11.07□□□□□ -0.64
SRGAP2D-201ENST00000605551 ZFPM1Q8IX07 1006 aa11.07□□□□□ -0.64
SRGAP2D-201ENST00000605551 COA7Q96BR5 231 aa11.07□□□□□ -0.64
SRGAP2D-201ENST00000605551 NSUN4Q96CB9 384 aaKnown RBP11.07□□□□□ -0.64
SRGAP2D-201ENST00000605551 HTATIP2Q9BUP3 242 aa11.07□□□□□ -0.64
SRGAP2D-201ENST00000605551 DHX36Q9H2U1 1008 aaKnown RBP11.07□□□□□ -0.64
SRGAP2D-201ENST00000605551 HERC5Q9UII4 1024 aaKnown RBP11.07□□□□□ -0.64
SRGAP2D-201ENST00000605551 AFG3L2Q9Y4W6 797 aa11.07□□□□□ -0.64
SRGAP2D-201ENST00000605551 PTPRFP10586 1907 aa11.07□□□□□ -0.64
SRGAP2D-201ENST00000605551 ZSWIM8A7E2V4 1837 aa11.07□□□□□ -0.64
SRGAP2D-201ENST00000605551 ADGRA2Q96PE1 1338 aa11.07□□□□□ -0.64
SRGAP2D-201ENST00000605551 MGAMO43451 1857 aa11.06□□□□□ -0.64
SRGAP2D-201ENST00000605551 PNMA6EA0A0J9YXQ4 647 aa11.06□□□□□ -0.64
SRGAP2D-201ENST00000605551 PHF20L1A8MW92 1017 aa11.06□□□□□ -0.64
SRGAP2D-201ENST00000605551 BCAR3O75815 825 aa11.06□□□□□ -0.64
SRGAP2D-201ENST00000605551 HLA-DOAP06340 250 aa11.06□□□□□ -0.64
SRGAP2D-201ENST00000605551 BCRP11274 1271 aa11.06□□□□□ -0.64
SRGAP2D-201ENST00000605551 CAPN2P17655 700 aa11.06□□□□□ -0.64
SRGAP2D-201ENST00000605551 HNRNPUQ00839 825 aaKnown RBP eCLIP11.06□□□□□ -0.64
SRGAP2D-201ENST00000605551 CERS3Q8IU89 383 aa11.06□□□□□ -0.64
SRGAP2D-201ENST00000605551 CRACR2BQ8N4Y2 399 aaPredicted RBP11.06□□□□□ -0.64
SRGAP2D-201ENST00000605551 PROCA1Q8NCQ7 364 aaPredicted RBP11.06□□□□□ -0.64
SRGAP2D-201ENST00000605551 DDX4Q9NQI0 724 aaKnown RBP11.06□□□□□ -0.64
SRGAP2D-201ENST00000605551 AGTPBP1Q9UPW5 1226 aa11.06□□□□□ -0.64
SRGAP2D-201ENST00000605551 TNRC18O15417 2968 aaPredicted RBP11.05□□□□□ -0.64
SRGAP2D-201ENST00000605551 ATAD5Q96QE3 1844 aa11.05□□□□□ -0.64
SRGAP2D-201ENST00000605551 SURF6O75683 361 aaKnown RBP11.05□□□□□ -0.64
SRGAP2D-201ENST00000605551 MCAMP43121 646 aa11.05□□□□□ -0.64
SRGAP2D-201ENST00000605551 RHBDL3P58872 404 aa11.05□□□□□ -0.64
SRGAP2D-201ENST00000605551 CAP1Q01518 475 aa11.05□□□□□ -0.64
SRGAP2D-201ENST00000605551 MAP3K10Q02779 954 aa11.05□□□□□ -0.64
SRGAP2D-201ENST00000605551 PRKCZQ05513 592 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms