RNA–Protein interactions for RNA: ENST00000604423.1

SRGAP2-211, Transcript of SLIT-ROBO Rho GTPase activating protein 2, humanhuman

TSL 1 (best)

Gene SRGAP2, Length 2,043 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2-211ENST00000604423 ERFEQ4G0M1 354 aa7.45□□□□□ -1.22
SRGAP2-211ENST00000604423 JAKMIP3Q5VZ66 844 aa7.45□□□□□ -1.22
SRGAP2-211ENST00000604423 CC2D1AQ6P1N0 951 aaPredicted RBP7.45□□□□□ -1.22
SRGAP2-211ENST00000604423 VASH1Q7L8A9 365 aaPredicted RBP7.45□□□□□ -1.22
SRGAP2-211ENST00000604423 GPR161Q8N6U8 529 aaKnown RBP7.45□□□□□ -1.22
SRGAP2-211ENST00000604423 SSH3Q8TE77 659 aa7.45□□□□□ -1.22
SRGAP2-211ENST00000604423 MYCBPQ99417 103 aaPredicted RBP7.45□□□□□ -1.22
SRGAP2-211ENST00000604423 DEF6Q9H4E7 631 aa7.45□□□□□ -1.22
SRGAP2-211ENST00000604423 MIS18AQ9NYP9 233 aa7.45□□□□□ -1.22
SRGAP2-211ENST00000604423 TBC1D8O95759 1140 aa7.44□□□□□ -1.22
SRGAP2-211ENST00000604423 RESTQ13127 1097 aa7.44□□□□□ -1.22
SRGAP2-211ENST00000604423 PPP1R42Q7Z4L9 355 aa7.44□□□□□ -1.22
SRGAP2-211ENST00000604423 ZBTB33Q86T24 672 aa7.44□□□□□ -1.22
SRGAP2-211ENST00000604423 CLASRPQ8N2M8 674 aaKnown RBP7.44□□□□□ -1.22
SRGAP2-211ENST00000604423 BRF1Q92994 677 aa7.44□□□□□ -1.22
SRGAP2-211ENST00000604423 IFNKQ9P0W0 207 aa7.44□□□□□ -1.22
SRGAP2-211ENST00000604423 ALKQ9UM73 1620 aa7.44□□□□□ -1.22
SRGAP2-211ENST00000604423 PLEKHG2Q9H7P9 1386 aa7.44□□□□□ -1.22
SRGAP2-211ENST00000604423 GOLGA6L9A6NEM1 432 aa7.44□□□□□ -1.22
SRGAP2-211ENST00000604423 RPS6KB1P23443 525 aa7.44□□□□□ -1.22
SRGAP2-211ENST00000604423 GRM5P41594 1212 aa7.44□□□□□ -1.22
SRGAP2-211ENST00000604423 GYS2P54840 703 aa7.44□□□□□ -1.22
SRGAP2-211ENST00000604423 FAM160A1Q05DH4 1040 aa7.44□□□□□ -1.22
SRGAP2-211ENST00000604423 PPP2R3AQ06190 1150 aa7.44□□□□□ -1.22
SRGAP2-211ENST00000604423 EIF4A2Q14240 407 aaKnown RBP7.44□□□□□ -1.22
SRGAP2-211ENST00000604423 NECTIN1Q15223 517 aa7.44□□□□□ -1.22
SRGAP2-211ENST00000604423 TMEM259Q4ZIN3 620 aa7.44□□□□□ -1.22
SRGAP2-211ENST00000604423 ARMCX5Q6P1M9 558 aa7.44□□□□□ -1.22
SRGAP2-211ENST00000604423 PDXDC2PQ6P474 469 aa7.44□□□□□ -1.22
SRGAP2-211ENST00000604423 NBPF11Q86T75 865 aa7.44□□□□□ -1.22
SRGAP2-211ENST00000604423 FSIP1Q8NA03 581 aa7.44□□□□□ -1.22
SRGAP2-211ENST00000604423 GOLGA1Q92805 767 aa7.44□□□□□ -1.22
SRGAP2-211ENST00000604423 KCNB2Q92953 911 aa7.44□□□□□ -1.22
SRGAP2-211ENST00000604423 EVI5LQ96CN4 794 aa7.44□□□□□ -1.22
SRGAP2-211ENST00000604423 ZNF396Q96N95 335 aaPredicted RBP7.44□□□□□ -1.22
SRGAP2-211ENST00000604423 CDK15Q96Q40 435 aa7.44□□□□□ -1.22
SRGAP2-211ENST00000604423 XPO4Q9C0E2 1151 aaKnown RBP7.44□□□□□ -1.22
SRGAP2-211ENST00000604423 LCMT1Q9UIC8 334 aa7.44□□□□□ -1.22
SRGAP2-211ENST00000604423 AKAP12Q02952 1782 aa7.44□□□□□ -1.22
SRGAP2-211ENST00000604423 USP42Q9H9J4 1324 aaKnown RBP7.43□□□□□ -1.22
SRGAP2-211ENST00000604423 C3P01024 1663 aa7.43□□□□□ -1.22
SRGAP2-211ENST00000604423 SLC27A2O14975 620 aa7.43□□□□□ -1.22
SRGAP2-211ENST00000604423 CBFA2T2O43439 604 aa7.43□□□□□ -1.22
SRGAP2-211ENST00000604423 SASH3O75995 380 aa7.43□□□□□ -1.22
SRGAP2-211ENST00000604423 IFIT2P09913 472 aaKnown RBP7.43□□□□□ -1.22
SRGAP2-211ENST00000604423 MAGEA9P43362 315 aa7.43□□□□□ -1.22
SRGAP2-211ENST00000604423 ME1P48163 572 aa7.43□□□□□ -1.22
SRGAP2-211ENST00000604423 PSME1Q06323 249 aa7.43□□□□□ -1.22
SRGAP2-211ENST00000604423 IQUBQ8NA54 791 aa7.43□□□□□ -1.22
SRGAP2-211ENST00000604423 NFATC2IPQ8NCF5 419 aa7.43□□□□□ -1.22
SRGAP2-211ENST00000604423 PPM1EQ8WY54 764 aa7.43□□□□□ -1.22
SRGAP2-211ENST00000604423 GPKOWQ92917 476 aaPredicted RBP eCLIP7.43□□□□□ -1.22
SRGAP2-211ENST00000604423 ZNF775Q96BV0 537 aaPredicted RBP7.43□□□□□ -1.22
SRGAP2-211ENST00000604423 TCEANC2Q96MN5 208 aa7.43□□□□□ -1.22
SRGAP2-211ENST00000604423 SDF4Q9BRK5 362 aa7.43□□□□□ -1.22
SRGAP2-211ENST00000604423 C1QTNF2Q9BXJ5 285 aa7.43□□□□□ -1.22
SRGAP2-211ENST00000604423 UBXN6Q9BZV1 441 aa7.43□□□□□ -1.22
SRGAP2-211ENST00000604423 ZFAND3Q9H8U3 227 aa7.43□□□□□ -1.22
SRGAP2-211ENST00000604423 ZCCHC17Q9NP64 241 aaKnown RBP7.43□□□□□ -1.22
SRGAP2-211ENST00000604423 HMG20BQ9P0W2 317 aa7.43□□□□□ -1.22
SRGAP2-211ENST00000604423 VPS18Q9P253 973 aa7.43□□□□□ -1.22
SRGAP2-211ENST00000604423 ADAM21Q9UKJ8 722 aa7.43□□□□□ -1.22
SRGAP2-211ENST00000604423 JRKLQ9Y4A0 524 aa7.43□□□□□ -1.22
SRGAP2-211ENST00000604423 FMN2Q9NZ56 1722 aa7.43□□□□□ -1.22
SRGAP2-211ENST00000604423 TMEM131LA2VDJ0 1609 aa7.43□□□□□ -1.22
SRGAP2-211ENST00000604423 RIMS1Q86UR5 1692 aaKnown RBP7.42□□□□□ -1.22
SRGAP2-211ENST00000604423 FAM177A1Q8N128 213 aaPredicted RBP7.42□□□□□ -1.22
SRGAP2-211ENST00000604423 ITPKCQ96DU7 683 aa7.42□□□□□ -1.22
SRGAP2-211ENST00000604423 SLC10A4Q96EP9 437 aa7.42□□□□□ -1.22
SRGAP2-211ENST00000604423 MPHOSPH8Q99549 860 aa7.42□□□□□ -1.22
SRGAP2-211ENST00000604423 BPIFA3Q9BQP9 254 aa7.42□□□□□ -1.22
SRGAP2-211ENST00000604423 OCSTAMPQ9BR26 566 aa7.42□□□□□ -1.22
SRGAP2-211ENST00000604423 ECHDC1Q9NTX5 307 aa7.42□□□□□ -1.22
SRGAP2-211ENST00000604423 RGPD1P0DJD0 1748 aa7.42□□□□□ -1.22
SRGAP2-211ENST00000604423 JAK2O60674 1132 aa7.42□□□□□ -1.22
SRGAP2-211ENST00000604423 ERLIN1O75477 346 aa7.42□□□□□ -1.22
SRGAP2-211ENST00000604423 ZIC2O95409 532 aaPredicted RBP7.42□□□□□ -1.22
SRGAP2-211ENST00000604423 TIMP2P16035 220 aa7.42□□□□□ -1.22
SRGAP2-211ENST00000604423 KRT32Q14532 448 aa7.42□□□□□ -1.22
SRGAP2-211ENST00000604423 HSP90B2PQ58FF3 399 aa7.42□□□□□ -1.22
SRGAP2-211ENST00000604423 ATL3Q6DD88 541 aa7.42□□□□□ -1.22
SRGAP2-211ENST00000604423 FCHSD1Q86WN1 690 aa7.42□□□□□ -1.22
SRGAP2-211ENST00000604423 ERC1Q8IUD2 1116 aa7.42□□□□□ -1.22
SRGAP2-211ENST00000604423 ADAM32Q8TC27 787 aa7.42□□□□□ -1.22
SRGAP2-211ENST00000604423 MRPS27Q92552 414 aaKnown RBP7.42□□□□□ -1.22
SRGAP2-211ENST00000604423 RABGGTAQ92696 567 aa7.42□□□□□ -1.22
SRGAP2-211ENST00000604423 DDX11Q96FC9 970 aa7.42□□□□□ -1.22
SRGAP2-211ENST00000604423 FMNL2Q96PY5 1086 aa7.42□□□□□ -1.22
SRGAP2-211ENST00000604423 NCAPGQ9BPX3 1015 aa7.42□□□□□ -1.22
SRGAP2-211ENST00000604423 USP44Q9H0E7 712 aa7.42□□□□□ -1.22
SRGAP2-211ENST00000604423 ACBD3Q9H3P7 528 aa7.42□□□□□ -1.22
SRGAP2-211ENST00000604423 GOLPH3LQ9H4A5 285 aa7.42□□□□□ -1.22
SRGAP2-211ENST00000604423 SLC52A1Q9NWF4 448 aa7.42□□□□□ -1.22
SRGAP2-211ENST00000604423 MKRN1Q9UHC7 482 aaKnown RBP7.42□□□□□ -1.22
SRGAP2-211ENST00000604423 PARP3Q9Y6F1 533 aa7.42□□□□□ -1.22
SRGAP2-211ENST00000604423 SPATA31D1Q6ZQQ2 1576 aa7.42□□□□□ -1.22
SRGAP2-211ENST00000604423 ADCY9O60503 1353 aa7.41□□□□□ -1.22
SRGAP2-211ENST00000604423 CPS1P31327 1500 aa7.41□□□□□ -1.22
SRGAP2-211ENST00000604423 A0A087WWV3 80 aa7.41□□□□□ -1.22
SRGAP2-211ENST00000604423 CCDC151A5D8V7 595 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms