RNA–Protein interactions for RNA: ENST00000603648.1

FOCAD-208, Transcript of focadhesin, humanhuman

TSL 4

Gene FOCAD, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOCAD-208ENST00000603648 SAMM50Q9Y512 469 aa7.12□□□□□ -1.27
FOCAD-208ENST00000603648 RECKO95980 971 aa7.11□□□□□ -1.27
FOCAD-208ENST00000603648 BUD31P41223 144 aaPredicted RBP7.11□□□□□ -1.27
FOCAD-208ENST00000603648 ZNF252P-AS1Q0IIN9 211 aa7.11□□□□□ -1.27
FOCAD-208ENST00000603648 FBXL18Q96ME1 805 aa7.11□□□□□ -1.27
FOCAD-208ENST00000603648 EMILIN2Q9BXX0 1053 aa7.11□□□□□ -1.27
FOCAD-208ENST00000603648 BACH2Q9BYV9 841 aa7.11□□□□□ -1.27
FOCAD-208ENST00000603648 RNF208Q9H0X6 261 aa7.11□□□□□ -1.27
FOCAD-208ENST00000603648 KRT82Q9NSB4 513 aa7.11□□□□□ -1.27
FOCAD-208ENST00000603648 CCDC39Q9UFE4 941 aa7.11□□□□□ -1.27
FOCAD-208ENST00000603648 WDR64B1ANS9 1081 aa7.1□□□□□ -1.27
FOCAD-208ENST00000603648 UVSSAQ2YD98 709 aa7.1□□□□□ -1.27
FOCAD-208ENST00000603648 EXOSC6Q5RKV6 272 aaKnown RBP7.1□□□□□ -1.27
FOCAD-208ENST00000603648 PCNX4Q63HM2 1172 aa7.1□□□□□ -1.27
FOCAD-208ENST00000603648 ZNF428Q96B54 188 aa7.1□□□□□ -1.27
FOCAD-208ENST00000603648 SUGCTQ9HAC7 445 aa7.1□□□□□ -1.27
FOCAD-208ENST00000603648 CACNA2D2Q9NY47 1150 aa7.1□□□□□ -1.27
FOCAD-208ENST00000603648 FARP2O94887 1054 aaPredicted RBP7.09□□□□□ -1.27
FOCAD-208ENST00000603648 RLBP1P12271 317 aa7.09□□□□□ -1.27
FOCAD-208ENST00000603648 RPS26P62854 115 aaKnown RBP7.09□□□□□ -1.27
FOCAD-208ENST00000603648 KRTAP19-4Q3LI73 84 aa7.09□□□□□ -1.27
FOCAD-208ENST00000603648 RASIP1Q5U651 963 aa7.09□□□□□ -1.27
FOCAD-208ENST00000603648 SCARA3Q6AZY7 606 aa7.09□□□□□ -1.27
FOCAD-208ENST00000603648 TMEM87AQ8NBN3 555 aa7.09□□□□□ -1.27
FOCAD-208ENST00000603648 SMG8Q8ND04 991 aaKnown RBP7.09□□□□□ -1.27
FOCAD-208ENST00000603648 CCDC86Q9H6F5 360 aaKnown RBP7.09□□□□□ -1.27
FOCAD-208ENST00000603648 PIM2Q9P1W9 311 aa7.09□□□□□ -1.27
FOCAD-208ENST00000603648 CYP8B1Q9UNU6 501 aa7.09□□□□□ -1.27
FOCAD-208ENST00000603648 SYNGAP1Q96PV0 1343 aa7.08□□□□□ -1.28
FOCAD-208ENST00000603648 LIG3P49916 1009 aa7.08□□□□□ -1.28
FOCAD-208ENST00000603648 LRRC14Q15048 493 aa7.08□□□□□ -1.28
FOCAD-208ENST00000603648 TSNAXIP1Q2TAA8 658 aa7.08□□□□□ -1.28
FOCAD-208ENST00000603648 ANKRD34AQ69YU3 496 aa7.08□□□□□ -1.28
FOCAD-208ENST00000603648 TTBK2Q6IQ55 1244 aa7.08□□□□□ -1.28
FOCAD-208ENST00000603648 ZNF862O60290 1169 aa7.07□□□□□ -1.28
FOCAD-208ENST00000603648 TRIM37O94972 964 aa7.07□□□□□ -1.28
FOCAD-208ENST00000603648 TIAF1O95411 115 aa7.07□□□□□ -1.28
FOCAD-208ENST00000603648 RBM25P49756 843 aaKnown RBP7.07□□□□□ -1.28
FOCAD-208ENST00000603648 HNRNPUQ00839 825 aaKnown RBP eCLIP7.07□□□□□ -1.28
FOCAD-208ENST00000603648 PDE3AQ14432 1141 aa7.07□□□□□ -1.28
FOCAD-208ENST00000603648 KIF4BQ2VIQ3 1234 aa7.07□□□□□ -1.28
FOCAD-208ENST00000603648 NUTM2GQ5VZR2 741 aa7.07□□□□□ -1.28
FOCAD-208ENST00000603648 LLGL2Q6P1M3 1020 aa7.07□□□□□ -1.28
FOCAD-208ENST00000603648 AGMOQ6ZNB7 445 aa7.07□□□□□ -1.28
FOCAD-208ENST00000603648 ERMP1Q7Z2K6 904 aa7.07□□□□□ -1.28
FOCAD-208ENST00000603648 CLEC10AQ8IUN9 316 aa7.07□□□□□ -1.28
FOCAD-208ENST00000603648 KSR1Q8IVT5 923 aa7.07□□□□□ -1.28
FOCAD-208ENST00000603648 GRIN3AQ8TCU5 1115 aa7.07□□□□□ -1.28
FOCAD-208ENST00000603648 KCNB2Q92953 911 aa7.07□□□□□ -1.28
FOCAD-208ENST00000603648 RSRP1Q9BUV0 290 aa7.07□□□□□ -1.28
FOCAD-208ENST00000603648 WDR18Q9BV38 432 aa7.07□□□□□ -1.28
FOCAD-208ENST00000603648 ZC3H12CQ9C0D7 883 aaKnown RBP7.07□□□□□ -1.28
FOCAD-208ENST00000603648 CBX8Q9HC52 389 aa7.07□□□□□ -1.28
FOCAD-208ENST00000603648 CYP4F12Q9HCS2 524 aa7.07□□□□□ -1.28
FOCAD-208ENST00000603648 METTL5Q9NRN9 209 aaKnown RBP7.07□□□□□ -1.28
FOCAD-208ENST00000603648 AOC2O75106 756 aa7.06□□□□□ -1.28
FOCAD-208ENST00000603648 FANCCQ00597 558 aa7.06□□□□□ -1.28
FOCAD-208ENST00000603648 MAP1SQ66K74 1059 aaPredicted RBP7.06□□□□□ -1.28
FOCAD-208ENST00000603648 FDX2Q6P4F2 183 aa7.06□□□□□ -1.28
FOCAD-208ENST00000603648 VSIG10LQ86VR7 867 aa7.06□□□□□ -1.28
FOCAD-208ENST00000603648 FAM46AQ96IP4 442 aaKnown RBP7.06□□□□□ -1.28
FOCAD-208ENST00000603648 MYRFLQ96LU7 910 aa7.06□□□□□ -1.28
FOCAD-208ENST00000603648 FAM83CQ9BQN1 747 aa7.06□□□□□ -1.28
FOCAD-208ENST00000603648 KCNF1Q9H3M0 494 aa7.06□□□□□ -1.28
FOCAD-208ENST00000603648 SCAMP3O14828 347 aaKnown RBP7.05□□□□□ -1.28
FOCAD-208ENST00000603648 PAPLNO95428 1278 aa7.05□□□□□ -1.28
FOCAD-208ENST00000603648 LIG1P18858 919 aa7.05□□□□□ -1.28
FOCAD-208ENST00000603648 MAP3K11Q16584 847 aa7.05□□□□□ -1.28
FOCAD-208ENST00000603648 MPRIPQ6WCQ1 1025 aa7.05□□□□□ -1.28
FOCAD-208ENST00000603648 PHC3Q8NDX5 983 aa7.05□□□□□ -1.28
FOCAD-208ENST00000603648 GPBAR1Q8TDU6 330 aa7.05□□□□□ -1.28
FOCAD-208ENST00000603648 WDR89Q96FK6 387 aaPredicted RBP7.05□□□□□ -1.28
FOCAD-208ENST00000603648 LEMD3Q9Y2U8 911 aa7.05□□□□□ -1.28
FOCAD-208ENST00000603648 PCDHGC5Q9Y5F6 944 aa7.05□□□□□ -1.28
FOCAD-208ENST00000603648 ADH5P11766 374 aa7.04□□□□□ -1.28
FOCAD-208ENST00000603648 ZNF76P36508 570 aa7.04□□□□□ -1.28
FOCAD-208ENST00000603648 PREPP48147 710 aa7.04□□□□□ -1.28
FOCAD-208ENST00000603648 SOX4Q06945 474 aaPredicted RBP7.04□□□□□ -1.28
FOCAD-208ENST00000603648 PWP1Q13610 501 aa7.04□□□□□ -1.28
FOCAD-208ENST00000603648 MSMPQ1L6U9 139 aa7.04□□□□□ -1.28
FOCAD-208ENST00000603648 NFXL1Q6ZNB6 911 aa7.04□□□□□ -1.28
FOCAD-208ENST00000603648 HS2ST1Q7LGA3 356 aa7.04□□□□□ -1.28
FOCAD-208ENST00000603648 RELL1Q8IUW5 271 aa7.04□□□□□ -1.28
FOCAD-208ENST00000603648 GAL3ST3Q96A11 431 aa7.04□□□□□ -1.28
FOCAD-208ENST00000603648 MFSD14AQ96MC6 490 aa7.04□□□□□ -1.28
FOCAD-208ENST00000603648 TMEM74Q96NL1 305 aa7.04□□□□□ -1.28
FOCAD-208ENST00000603648 RAD18Q9NS91 495 aa7.04□□□□□ -1.28
FOCAD-208ENST00000603648 TFE3P19532 575 aaPredicted RBP7.03□□□□□ -1.28
FOCAD-208ENST00000603648 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.03□□□□□ -1.28
FOCAD-208ENST00000603648 BEND4Q6ZU67 534 aa7.03□□□□□ -1.28
FOCAD-208ENST00000603648 FAM20CQ8IXL6 584 aa7.03□□□□□ -1.28
FOCAD-208ENST00000603648 C12orf50Q8NA57 414 aaPredicted RBP7.03□□□□□ -1.28
FOCAD-208ENST00000603648 GIMAP7Q8NHV1 300 aa7.03□□□□□ -1.28
FOCAD-208ENST00000603648 RHOVQ96L33 236 aa7.03□□□□□ -1.28
FOCAD-208ENST00000603648 SLC38A3Q99624 504 aa7.03□□□□□ -1.28
FOCAD-208ENST00000603648 GSX1Q9H4S2 264 aaPredicted RBP7.03□□□□□ -1.28
FOCAD-208ENST00000603648 ATG3Q9NT62 314 aa7.03□□□□□ -1.28
FOCAD-208ENST00000603648 KBTBD4Q9NVX7 518 aa7.03□□□□□ -1.28
FOCAD-208ENST00000603648 GGT7Q9UJ14 662 aa7.03□□□□□ -1.28
FOCAD-208ENST00000603648 TLR6Q9Y2C9 796 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms