RNA–Protein interactions for RNA: ENST00000602848.5

PPFIA3-211, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-211ENST00000602848 ZSWIM5Q9P217 1185 aa26.18■■□□□ 1.78
PPFIA3-211ENST00000602848 KIF3AQ9Y496 699 aa26.18■■□□□ 1.78
PPFIA3-211ENST00000602848 CD2APQ9Y5K6 639 aa26.18■■□□□ 1.78
PPFIA3-211ENST00000602848 SNED1Q8TER0 1413 aa26.18■■□□□ 1.78
PPFIA3-211ENST00000602848 TGFB2P61812 414 aa26.17■■□□□ 1.78
PPFIA3-211ENST00000602848 SGMS1Q86VZ5 419 aa26.17■■□□□ 1.78
PPFIA3-211ENST00000602848 RTKN2Q8IZC4 609 aa26.17■■□□□ 1.78
PPFIA3-211ENST00000602848 SMARCC2Q8TAQ2 1214 aa26.17■■□□□ 1.78
PPFIA3-211ENST00000602848 IGDCC4Q8TDY8 1250 aa26.17■■□□□ 1.78
PPFIA3-211ENST00000602848 ESR2Q92731 530 aa26.17■■□□□ 1.78
PPFIA3-211ENST00000602848 USP17L12C9JPN9 530 aa26.17■■□□□ 1.78
PPFIA3-211ENST00000602848 USP17L21D6R901 530 aa26.17■■□□□ 1.78
PPFIA3-211ENST00000602848 KDM4AO75164 1064 aa26.17■■□□□ 1.78
PPFIA3-211ENST00000602848 ZSCAN22P10073 491 aaPredicted RBP26.17■■□□□ 1.78
PPFIA3-211ENST00000602848 DIXDC1Q155Q3 683 aa26.17■■□□□ 1.78
PPFIA3-211ENST00000602848 MKRN1Q9UHC7 482 aaKnown RBP26.17■■□□□ 1.78
PPFIA3-211ENST00000602848 MYH2Q9UKX2 1941 aa26.17■■□□□ 1.78
PPFIA3-211ENST00000602848 USP5P45974 858 aa26.16■■□□□ 1.78
PPFIA3-211ENST00000602848 DOK7Q18PE1 504 aa26.16■■□□□ 1.78
PPFIA3-211ENST00000602848 MRIQ9BWK5 157 aa26.16■■□□□ 1.78
PPFIA3-211ENST00000602848 VPS33BQ9H267 617 aa26.16■■□□□ 1.78
PPFIA3-211ENST00000602848 ATP6V1DQ9Y5K8 247 aa26.16■■□□□ 1.78
PPFIA3-211ENST00000602848 KLF18A0A0U1RQI7 1052 aa26.15■■□□□ 1.78
PPFIA3-211ENST00000602848 ORC4O43929 436 aa26.15■■□□□ 1.78
PPFIA3-211ENST00000602848 KIAA2012Q0VF49 1180 aa26.15■■□□□ 1.78
PPFIA3-211ENST00000602848 SOGA3Q5TF21 947 aa26.15■■□□□ 1.78
PPFIA3-211ENST00000602848 STRIP1Q5VSL9 837 aa26.15■■□□□ 1.78
PPFIA3-211ENST00000602848 LARP1BQ659C4 914 aaKnown RBP26.15■■□□□ 1.78
PPFIA3-211ENST00000602848 AMOTL1Q8IY63 956 aa26.15■■□□□ 1.78
PPFIA3-211ENST00000602848 NLGN2Q8NFZ4 835 aa26.15■■□□□ 1.78
PPFIA3-211ENST00000602848 SYT17Q9BSW7 474 aa26.15■■□□□ 1.78
PPFIA3-211ENST00000602848 TACC3Q9Y6A5 838 aa26.15■■□□□ 1.78
PPFIA3-211ENST00000602848 BTDP43251 543 aa26.14■■□□□ 1.78
PPFIA3-211ENST00000602848 CCDC93Q567U6 631 aa26.14■■□□□ 1.78
PPFIA3-211ENST00000602848 TMEM67Q5HYA8 995 aa26.14■■□□□ 1.78
PPFIA3-211ENST00000602848 KLHL34Q8N239 644 aa26.14■■□□□ 1.78
PPFIA3-211ENST00000602848 SH3RF3Q8TEJ3 882 aaPredicted RBP26.14■■□□□ 1.78
PPFIA3-211ENST00000602848 BRPF3Q9ULD4 1205 aa26.14■■□□□ 1.78
PPFIA3-211ENST00000602848 ERICH2A1L162 156 aa26.14■■□□□ 1.77
PPFIA3-211ENST00000602848 SKOR2Q2VWA4 1001 aaPredicted RBP26.14■■□□□ 1.77
PPFIA3-211ENST00000602848 PSMD1Q99460 953 aa26.14■■□□□ 1.77
PPFIA3-211ENST00000602848 IFIT3O14879 490 aaKnown RBP26.13■■□□□ 1.77
PPFIA3-211ENST00000602848 DPEP1P16444 411 aa26.13■■□□□ 1.77
PPFIA3-211ENST00000602848 KCNA3P22001 575 aa26.13■■□□□ 1.77
PPFIA3-211ENST00000602848 RCAN1P53805 252 aa26.13■■□□□ 1.77
PPFIA3-211ENST00000602848 PDE4BQ07343 736 aa26.13■■□□□ 1.77
PPFIA3-211ENST00000602848 LY9Q9HBG7 655 aa26.13■■□□□ 1.77
PPFIA3-211ENST00000602848 GPHNQ9NQX3 736 aaPredicted RBP26.13■■□□□ 1.77
PPFIA3-211ENST00000602848 TOMM22Q9NS69 142 aa26.13■■□□□ 1.77
PPFIA3-211ENST00000602848 HHIPL2Q6UWX4 724 aa26.12■■□□□ 1.77
PPFIA3-211ENST00000602848 NSUN7Q8NE18 718 aaKnown RBP26.12■■□□□ 1.77
PPFIA3-211ENST00000602848 INCENPQ9NQS7 918 aa26.12■■□□□ 1.77
PPFIA3-211ENST00000602848 MCM9Q9NXL9 1143 aa26.12■■□□□ 1.77
PPFIA3-211ENST00000602848 DDX52Q9Y2R4 599 aaKnown RBP eCLIP26.12■■□□□ 1.77
PPFIA3-211ENST00000602848 LAMB1P07942 1786 aa26.12■■□□□ 1.77
PPFIA3-211ENST00000602848 BAZ2AQ9UIF9 1905 aaKnown RBP26.11■■□□□ 1.77
PPFIA3-211ENST00000602848 GOLGA8BA8MQT2 603 aa26.11■■□□□ 1.77
PPFIA3-211ENST00000602848 C21orf2O43822 256 aa26.11■■□□□ 1.77
PPFIA3-211ENST00000602848 RRP12Q5JTH9 1297 aaKnown RBP26.11■■□□□ 1.77
PPFIA3-211ENST00000602848 C12orf60Q5U649 245 aa26.11■■□□□ 1.77
PPFIA3-211ENST00000602848 CERS5Q8N5B7 392 aa26.11■■□□□ 1.77
PPFIA3-211ENST00000602848 RGS22Q8NE09 1264 aa26.11■■□□□ 1.77
PPFIA3-211ENST00000602848 NAP1L2Q9ULW6 460 aaPredicted RBP26.11■■□□□ 1.77
PPFIA3-211ENST00000602848 HPS5Q9UPZ3 1129 aa26.11■■□□□ 1.77
PPFIA3-211ENST00000602848 MTMR6Q9Y217 621 aa26.11■■□□□ 1.77
PPFIA3-211ENST00000602848 BRCA1P38398 1863 aaKnown RBP26.11■■□□□ 1.77
PPFIA3-211ENST00000602848 ECE2O60344 883 aa26.1■■□□□ 1.77
PPFIA3-211ENST00000602848 HDLBPQ00341 1268 aaKnown RBP26.1■■□□□ 1.77
PPFIA3-211ENST00000602848 SYNE3Q6ZMZ3 975 aa26.1■■□□□ 1.77
PPFIA3-211ENST00000602848 FAM184AQ8NB25 1140 aa26.1■■□□□ 1.77
PPFIA3-211ENST00000602848 FBXW7Q969H0 707 aa26.1■■□□□ 1.77
PPFIA3-211ENST00000602848 ZNF219Q9P2Y4 722 aaPredicted RBP26.1■■□□□ 1.77
PPFIA3-211ENST00000602848 ROBO3Q96MS0 1386 aa26.1■■□□□ 1.77
PPFIA3-211ENST00000602848 F13A1P00488 732 aa26.1■■□□□ 1.77
PPFIA3-211ENST00000602848 CCT2P78371 535 aaKnown RBP26.1■■□□□ 1.77
PPFIA3-211ENST00000602848 NFXL1Q6ZNB6 911 aa26.1■■□□□ 1.77
PPFIA3-211ENST00000602848 TEX11Q8IYF3 940 aa26.1■■□□□ 1.77
PPFIA3-211ENST00000602848 UBAC1Q9BSL1 405 aa26.1■■□□□ 1.77
PPFIA3-211ENST00000602848 DBNDD1Q9H9R9 158 aa26.1■■□□□ 1.77
PPFIA3-211ENST00000602848 DAGLAQ9Y4D2 1042 aa26.1■■□□□ 1.77
PPFIA3-211ENST00000602848 USP17L3A6NCW0 530 aa26.09■■□□□ 1.77
PPFIA3-211ENST00000602848 USP17L4A6NCW7 530 aa26.09■■□□□ 1.77
PPFIA3-211ENST00000602848 CCDC69A6NI79 296 aa26.09■■□□□ 1.77
PPFIA3-211ENST00000602848 CTDNEP1O95476 244 aa26.09■■□□□ 1.77
PPFIA3-211ENST00000602848 RHBDL3P58872 404 aa26.09■■□□□ 1.77
PPFIA3-211ENST00000602848 WTAPQ15007 396 aa26.09■■□□□ 1.77
PPFIA3-211ENST00000602848 APOA5Q6Q788 366 aa26.09■■□□□ 1.77
PPFIA3-211ENST00000602848 USP17L1Q7RTZ2 530 aa26.09■■□□□ 1.77
PPFIA3-211ENST00000602848 PIM2Q9P1W9 311 aa26.09■■□□□ 1.77
PPFIA3-211ENST00000602848 TTF2Q9UNY4 1162 aaKnown RBP26.09■■□□□ 1.77
PPFIA3-211ENST00000602848 NID2Q14112 1375 aa26.08■■□□□ 1.77
PPFIA3-211ENST00000602848 PTPDC1A2A3K4 754 aa26.08■■□□□ 1.77
PPFIA3-211ENST00000602848 CDKL5O76039 1030 aa26.08■■□□□ 1.77
PPFIA3-211ENST00000602848 CPLX2Q6PUV4 134 aaKnown RBP26.08■■□□□ 1.77
PPFIA3-211ENST00000602848 IQCA1Q86XH1 822 aa26.08■■□□□ 1.77
PPFIA3-211ENST00000602848 NKX2-3Q8TAU0 364 aa26.08■■□□□ 1.77
PPFIA3-211ENST00000602848 TGFBRAP1Q8WUH2 860 aa26.08■■□□□ 1.77
PPFIA3-211ENST00000602848 ZNF287Q9HBT7 754 aa26.08■■□□□ 1.77
PPFIA3-211ENST00000602848 SLC12A7Q9Y666 1083 aa26.08■■□□□ 1.77
PPFIA3-211ENST00000602848 CYP2D7A0A087X1C5 515 aa26.07■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms