RNA–Protein interactions for RNA: ENST00000602710.5

UBE2E3-209, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2E3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-209ENST00000602710 CTR9Q6PD62 1173 aa22.72■■□□□ 1.23
UBE2E3-209ENST00000602710 TRPM4Q8TD43 1214 aa22.72■■□□□ 1.23
UBE2E3-209ENST00000602710 KCNB2Q92953 911 aa22.72■■□□□ 1.23
UBE2E3-209ENST00000602710 MCM9Q9NXL9 1143 aa22.72■■□□□ 1.23
UBE2E3-209ENST00000602710 SAP30BPQ9UHR5 308 aaKnown RBP22.72■■□□□ 1.23
UBE2E3-209ENST00000602710 SNX14Q9Y5W7 946 aa22.72■■□□□ 1.23
UBE2E3-209ENST00000602710 ZMYM6O95789 1325 aa22.71■■□□□ 1.23
UBE2E3-209ENST00000602710 NAV1Q8NEY1 1877 aa22.71■■□□□ 1.23
UBE2E3-209ENST00000602710 EVX2Q03828 476 aa22.71■■□□□ 1.23
UBE2E3-209ENST00000602710 SLC4A8Q2Y0W8 1093 aa22.71■■□□□ 1.23
UBE2E3-209ENST00000602710 SPDYE2Q495Y8 402 aa22.71■■□□□ 1.23
UBE2E3-209ENST00000602710 DDRGK1Q96HY6 314 aa22.71■■□□□ 1.23
UBE2E3-209ENST00000602710 KIF2CQ99661 725 aa22.71■■□□□ 1.23
UBE2E3-209ENST00000602710 FAM198AQ9UFP1 575 aa22.71■■□□□ 1.23
UBE2E3-209ENST00000602710 ASTN2O75129 1339 aaPredicted RBP22.7■■□□□ 1.22
UBE2E3-209ENST00000602710 MINDY4BA8MYZ0 360 aa22.7■■□□□ 1.22
UBE2E3-209ENST00000602710 CYP2D6P10635 497 aa22.7■■□□□ 1.22
UBE2E3-209ENST00000602710 LMOD1P29536 600 aaPredicted RBP22.7■■□□□ 1.22
UBE2E3-209ENST00000602710 IMMTQ16891 758 aaKnown RBP22.7■■□□□ 1.22
UBE2E3-209ENST00000602710 RNF20Q5VTR2 975 aa22.7■■□□□ 1.22
UBE2E3-209ENST00000602710 ZFPM1Q8IX07 1006 aa22.7■■□□□ 1.22
UBE2E3-209ENST00000602710 L3MBTL3Q96JM7 780 aaPredicted RBP22.7■■□□□ 1.22
UBE2E3-209ENST00000602710 IDI2Q9BXS1 227 aa22.7■■□□□ 1.22
UBE2E3-209ENST00000602710 NBPF3Q9H094 633 aa22.7■■□□□ 1.22
UBE2E3-209ENST00000602710 MYH1P12882 1939 aa22.7■■□□□ 1.22
UBE2E3-209ENST00000602710 ZNF213O14771 459 aa22.69■■□□□ 1.22
UBE2E3-209ENST00000602710 TCP10Q12799 353 aa22.69■■□□□ 1.22
UBE2E3-209ENST00000602710 LAMA4Q16363 1823 aa22.68■■□□□ 1.22
UBE2E3-209ENST00000602710 TCP10L2B9ZVM9 353 aa22.68■■□□□ 1.22
UBE2E3-209ENST00000602710 MYO1BO43795 1136 aa22.68■■□□□ 1.22
UBE2E3-209ENST00000602710 HIRAP54198 1017 aaPredicted RBP22.68■■□□□ 1.22
UBE2E3-209ENST00000602710 CTDSPL2Q05D32 466 aa22.68■■□□□ 1.22
UBE2E3-209ENST00000602710 VEZTQ9HBM0 779 aa22.68■■□□□ 1.22
UBE2E3-209ENST00000602710 DDX60LQ5H9U9 1706 aaKnown RBP22.68■■□□□ 1.22
UBE2E3-209ENST00000602710 ZKSCAN1P17029 563 aaPredicted RBP22.67■■□□□ 1.22
UBE2E3-209ENST00000602710 PPARAQ07869 468 aa22.67■■□□□ 1.22
UBE2E3-209ENST00000602710 ADCK5Q3MIX3 580 aa22.67■■□□□ 1.22
UBE2E3-209ENST00000602710 SBK1Q52WX2 424 aa22.67■■□□□ 1.22
UBE2E3-209ENST00000602710 STK11IPQ8N1F8 1099 aa22.67■■□□□ 1.22
UBE2E3-209ENST00000602710 OSBPL5Q9H0X9 879 aaPredicted RBP22.67■■□□□ 1.22
UBE2E3-209ENST00000602710 TMOD2Q9NZR1 351 aa22.67■■□□□ 1.22
UBE2E3-209ENST00000602710 ANAPC15P60006 121 aa22.67■■□□□ 1.22
UBE2E3-209ENST00000602710 TSGA10IPQ3SY00 556 aa22.67■■□□□ 1.22
UBE2E3-209ENST00000602710 STOX1Q6ZVD7 989 aa22.67■■□□□ 1.22
UBE2E3-209ENST00000602710 TBC1D10CQ8IV04 446 aa22.67■■□□□ 1.22
UBE2E3-209ENST00000602710 INCENPQ9NQS7 918 aa22.67■■□□□ 1.22
UBE2E3-209ENST00000602710 ADARB2Q9NS39 739 aaKnown RBP22.67■■□□□ 1.22
UBE2E3-209ENST00000602710 ARPP21Q9UBL0 812 aaPredicted RBP22.67■■□□□ 1.22
UBE2E3-209ENST00000602710 SCAF8Q9UPN6 1271 aaKnown RBP22.67■■□□□ 1.22
UBE2E3-209ENST00000602710 TACC3Q9Y6A5 838 aa22.67■■□□□ 1.22
UBE2E3-209ENST00000602710 POLR3DP05423 398 aaPredicted RBP22.66■■□□□ 1.22
UBE2E3-209ENST00000602710 PLCD1P51178 756 aa22.66■■□□□ 1.22
UBE2E3-209ENST00000602710 C12orf60Q5U649 245 aa22.66■■□□□ 1.22
UBE2E3-209ENST00000602710 HACL1Q9UJ83 578 aa22.66■■□□□ 1.22
UBE2E3-209ENST00000602710 POTECB2RU33 542 aa22.65■■□□□ 1.22
UBE2E3-209ENST00000602710 E7EWF7 191 aa22.65■■□□□ 1.22
UBE2E3-209ENST00000602710 NPM3O75607 178 aaKnown RBP22.65■■□□□ 1.22
UBE2E3-209ENST00000602710 COL9A3Q14050 684 aaPredicted RBP22.65■■□□□ 1.22
UBE2E3-209ENST00000602710 IL17RAQ96F46 866 aa22.65■■□□□ 1.22
UBE2E3-209ENST00000602710 ANAPC4Q9UJX5 808 aa22.65■■□□□ 1.22
UBE2E3-209ENST00000602710 LAMB1P07942 1786 aa22.65■■□□□ 1.22
UBE2E3-209ENST00000602710 CNTNAP1P78357 1384 aa22.65■■□□□ 1.22
UBE2E3-209ENST00000602710 ENTPD3O75355 529 aa22.64■■□□□ 1.22
UBE2E3-209ENST00000602710 SH3BP5LQ7L8J4 393 aa22.64■■□□□ 1.22
UBE2E3-209ENST00000602710 FKBP1CQ5VVH2 108 aa22.63■■□□□ 1.21
UBE2E3-209ENST00000602710 JAKMIP1Q96N16 626 aaKnown RBP22.63■■□□□ 1.21
UBE2E3-209ENST00000602710 RBM19Q9Y4C8 960 aaKnown RBP22.63■■□□□ 1.21
UBE2E3-209ENST00000602710 WDR90Q96KV7 1748 aa22.63■■□□□ 1.21
UBE2E3-209ENST00000602710 DDTLA6NHG4 134 aaPredicted RBP22.63■■□□□ 1.21
UBE2E3-209ENST00000602710 EPHX2P34913 555 aa22.63■■□□□ 1.21
UBE2E3-209ENST00000602710 ANGEL2Q5VTE6 544 aaKnown RBP22.63■■□□□ 1.21
UBE2E3-209ENST00000602710 AMOTL1Q8IY63 956 aa22.63■■□□□ 1.21
UBE2E3-209ENST00000602710 DYNLL2Q96FJ2 89 aa22.63■■□□□ 1.21
UBE2E3-209ENST00000602710 SCN4AP35499 1836 aa22.62■■□□□ 1.21
UBE2E3-209ENST00000602710 CPA1P15085 419 aa22.62■■□□□ 1.21
UBE2E3-209ENST00000602710 AKNAD1Q5T1N1 836 aa22.62■■□□□ 1.21
UBE2E3-209ENST00000602710 ZSCAN29Q8IWY8 852 aaPredicted RBP22.62■■□□□ 1.21
UBE2E3-209ENST00000602710 NKX2-3Q8TAU0 364 aa22.62■■□□□ 1.21
UBE2E3-209ENST00000602710 KRT32Q14532 448 aa22.61■■□□□ 1.21
UBE2E3-209ENST00000602710 STAG1Q8WVM7 1258 aa22.61■■□□□ 1.21
UBE2E3-209ENST00000602710 FAM151AQ8WW52 585 aa22.61■■□□□ 1.21
UBE2E3-209ENST00000602710 UPF3BQ9BZI7 483 aaKnown RBP22.61■■□□□ 1.21
UBE2E3-209ENST00000602710 TMEM39BQ9GZU3 492 aa22.61■■□□□ 1.21
UBE2E3-209ENST00000602710 TAF1DQ9H5J8 278 aaPredicted RBP22.61■■□□□ 1.21
UBE2E3-209ENST00000602710 GGA3Q9NZ52 723 aa22.61■■□□□ 1.21
UBE2E3-209ENST00000602710 NEDD4P46934 1319 aa22.61■■□□□ 1.21
UBE2E3-209ENST00000602710 POLR2AP24928 1970 aaKnown RBP22.6■■□□□ 1.21
UBE2E3-209ENST00000602710 SLURP2P0DP57 97 aa22.6■■□□□ 1.21
UBE2E3-209ENST00000602710 CASTP20810 708 aaKnown RBP22.6■■□□□ 1.21
UBE2E3-209ENST00000602710 MFSD6Q6ZSS7 791 aa22.6■■□□□ 1.21
UBE2E3-209ENST00000602710 TTC6Q86TZ1 520 aa22.6■■□□□ 1.21
UBE2E3-209ENST00000602710 FAM83AQ86UY5 434 aa22.6■■□□□ 1.21
UBE2E3-209ENST00000602710 NEK1Q96PY6 1258 aa22.6■■□□□ 1.21
UBE2E3-209ENST00000602710 IQCA1LA6NCM1 817 aa22.59■■□□□ 1.21
UBE2E3-209ENST00000602710 RASA3Q14644 834 aa22.59■■□□□ 1.21
UBE2E3-209ENST00000602710 USP50Q70EL3 339 aaPredicted RBP22.59■■□□□ 1.21
UBE2E3-209ENST00000602710 CDAN1Q8IWY9 1227 aa22.59■■□□□ 1.21
UBE2E3-209ENST00000602710 DHX36Q9H2U1 1008 aaKnown RBP22.59■■□□□ 1.21
UBE2E3-209ENST00000602710 SIPA1L1O43166 1804 aa22.59■■□□□ 1.21
UBE2E3-209ENST00000602710 ATRNL1Q5VV63 1379 aa22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms