RNA–Protein interactions for RNA: ENST00000602619.1

SGMS1-207, Transcript of sphingomyelin synthase 1, humanhuman

TSL 3

Gene SGMS1, Length 461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-207ENST00000602619 POU4F3Q15319 338 aa5.12□□□□□ -1.59
SGMS1-207ENST00000602619 AOC3Q16853 763 aa5.12□□□□□ -1.59
SGMS1-207ENST00000602619 ZSWIM9Q86XI8 627 aa5.12□□□□□ -1.59
SGMS1-207ENST00000602619 ZSCAN29Q8IWY8 852 aaPredicted RBP5.12□□□□□ -1.59
SGMS1-207ENST00000602619 FLAD1Q8NFF5 587 aa5.12□□□□□ -1.59
SGMS1-207ENST00000602619 DNAJC25Q9H1X3 360 aa5.12□□□□□ -1.59
SGMS1-207ENST00000602619 LATS2Q9NRM7 1088 aa5.12□□□□□ -1.59
SGMS1-207ENST00000602619 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.11□□□□□ -1.59
SGMS1-207ENST00000602619 NEFLP07196 543 aa5.11□□□□□ -1.59
SGMS1-207ENST00000602619 EDN3P14138 238 aa5.11□□□□□ -1.59
SGMS1-207ENST00000602619 CDK5R2Q13319 367 aa5.11□□□□□ -1.59
SGMS1-207ENST00000602619 CCDC27Q2M243 656 aa5.11□□□□□ -1.59
SGMS1-207ENST00000602619 ANKLE2Q86XL3 938 aa5.11□□□□□ -1.59
SGMS1-207ENST00000602619 NPAS4Q8IUM7 802 aa5.11□□□□□ -1.59
SGMS1-207ENST00000602619 LIN37Q96GY3 246 aaPredicted RBP5.11□□□□□ -1.59
SGMS1-207ENST00000602619 ZFYVE28Q9HCC9 887 aa5.11□□□□□ -1.59
SGMS1-207ENST00000602619 FOXD3Q9UJU5 478 aaPredicted RBP5.11□□□□□ -1.59
SGMS1-207ENST00000602619 PHACTR2O75167 634 aa5.1□□□□□ -1.59
SGMS1-207ENST00000602619 KRT1P04264 644 aa5.1□□□□□ -1.59
SGMS1-207ENST00000602619 PCDH1Q08174 1060 aa5.1□□□□□ -1.59
SGMS1-207ENST00000602619 ENOX2Q16206 610 aaKnown RBP5.1□□□□□ -1.59
SGMS1-207ENST00000602619 KCNMB1Q16558 191 aa5.1□□□□□ -1.59
SGMS1-207ENST00000602619 IFI16Q16666 785 aaKnown RBP5.1□□□□□ -1.59
SGMS1-207ENST00000602619 SLC23A3Q6PIS1 610 aa5.1□□□□□ -1.59
SGMS1-207ENST00000602619 GALNT12Q8IXK2 581 aa5.1□□□□□ -1.59
SGMS1-207ENST00000602619 TTC16Q8NEE8 873 aa5.1□□□□□ -1.59
SGMS1-207ENST00000602619 PRDM7Q9NQW5 492 aa5.1□□□□□ -1.59
SGMS1-207ENST00000602619 PPP1R9AQ9ULJ8 1098 aa5.1□□□□□ -1.59
SGMS1-207ENST00000602619 PLAGL2Q9UPG8 496 aa5.1□□□□□ -1.59
SGMS1-207ENST00000602619 AOC2O75106 756 aa5.09□□□□□ -1.59
SGMS1-207ENST00000602619 CPNE3O75131 537 aaKnown RBP5.09□□□□□ -1.59
SGMS1-207ENST00000602619 ORC1Q13415 861 aa5.09□□□□□ -1.59
SGMS1-207ENST00000602619 HP1BP3Q5SSJ5 553 aaPredicted RBP5.09□□□□□ -1.59
SGMS1-207ENST00000602619 SYDE1Q6ZW31 735 aaPredicted RBP5.09□□□□□ -1.59
SGMS1-207ENST00000602619 FBF1Q8TES7 1133 aa5.09□□□□□ -1.59
SGMS1-207ENST00000602619 HRASLS5Q96KN8 279 aa5.09□□□□□ -1.59
SGMS1-207ENST00000602619 CSRNP1Q96S65 589 aa5.09□□□□□ -1.59
SGMS1-207ENST00000602619 PPP1R16BQ96T49 567 aa5.09□□□□□ -1.59
SGMS1-207ENST00000602619 TRIM56Q9BRZ2 755 aaKnown RBP5.09□□□□□ -1.59
SGMS1-207ENST00000602619 CLEC4MQ9H2X3 399 aaPredicted RBP5.09□□□□□ -1.59
SGMS1-207ENST00000602619 RAPGEFL1Q9UHV5 662 aa5.09□□□□□ -1.59
SGMS1-207ENST00000602619 AMOTL2Q9Y2J4 779 aa5.09□□□□□ -1.59
SGMS1-207ENST00000602619 A0A096LPE4 126 aa5.08□□□□□ -1.6
SGMS1-207ENST00000602619 A0A1W2PPZ6 126 aa5.08□□□□□ -1.6
SGMS1-207ENST00000602619 EIF1AYO14602 144 aaKnown RBP5.08□□□□□ -1.6
SGMS1-207ENST00000602619 LEFTY1O75610 366 aa5.08□□□□□ -1.6
SGMS1-207ENST00000602619 C1QTNF9P0C862 333 aa5.08□□□□□ -1.6
SGMS1-207ENST00000602619 OXCT1P55809 520 aa5.08□□□□□ -1.6
SGMS1-207ENST00000602619 TMCO4Q5TGY1 634 aa5.08□□□□□ -1.6
SGMS1-207ENST00000602619 FYB2Q5VWT5 728 aa5.08□□□□□ -1.6
SGMS1-207ENST00000602619 FBXO33Q7Z6M2 555 aa5.08□□□□□ -1.6
SGMS1-207ENST00000602619 WDR18Q9BV38 432 aa5.08□□□□□ -1.6
SGMS1-207ENST00000602619 NIF3L1Q9GZT8 377 aa5.08□□□□□ -1.6
SGMS1-207ENST00000602619 ZFYVE1Q9HBF4 777 aa5.08□□□□□ -1.6
SGMS1-207ENST00000602619 MKNK2Q9HBH9 465 aa5.08□□□□□ -1.6
SGMS1-207ENST00000602619 TMEM265A0A087WTH1 108 aa5.07□□□□□ -1.6
SGMS1-207ENST00000602619 ANKRD33BA6NCL7 494 aa5.07□□□□□ -1.6
SGMS1-207ENST00000602619 P4HBP07237 508 aaKnown RBP5.07□□□□□ -1.6
SGMS1-207ENST00000602619 SPRED3Q2MJR0 410 aa5.07□□□□□ -1.6
SGMS1-207ENST00000602619 ANGEL2Q5VTE6 544 aaKnown RBP5.07□□□□□ -1.6
SGMS1-207ENST00000602619 PRR23BQ6ZRT6 265 aa5.07□□□□□ -1.6
SGMS1-207ENST00000602619 AMIGO3Q86WK7 504 aa5.07□□□□□ -1.6
SGMS1-207ENST00000602619 CORO1BQ9BR76 489 aa5.07□□□□□ -1.6
SGMS1-207ENST00000602619 JAG2Q9Y219 1238 aa5.07□□□□□ -1.6
SGMS1-207ENST00000602619 SYNGAP1Q96PV0 1343 aa5.06□□□□□ -1.6
SGMS1-207ENST00000602619 CEACAM5P06731 702 aa5.06□□□□□ -1.6
SGMS1-207ENST00000602619 GRIA4P48058 902 aa5.06□□□□□ -1.6
SGMS1-207ENST00000602619 PLCB3Q01970 1234 aa5.06□□□□□ -1.6
SGMS1-207ENST00000602619 KIAA0319Q5VV43 1072 aa5.06□□□□□ -1.6
SGMS1-207ENST00000602619 USPL1Q5W0Q7 1092 aa5.06□□□□□ -1.6
SGMS1-207ENST00000602619 PRPF40BQ6NWY9 871 aaKnown RBP5.06□□□□□ -1.6
SGMS1-207ENST00000602619 CTNND2Q9UQB3 1225 aa5.06□□□□□ -1.6
SGMS1-207ENST00000602619 TMPRSS2O15393 492 aa5.05□□□□□ -1.6
SGMS1-207ENST00000602619 MFAP1P55081 439 aaKnown RBP5.05□□□□□ -1.6
SGMS1-207ENST00000602619 CCNJLQ8IV13 435 aa5.05□□□□□ -1.6
SGMS1-207ENST00000602619 TMC1Q8TDI8 760 aa5.05□□□□□ -1.6
SGMS1-207ENST00000602619 CCDC74AQ96AQ1 378 aa5.05□□□□□ -1.6
SGMS1-207ENST00000602619 WDR89Q96FK6 387 aaPredicted RBP5.05□□□□□ -1.6
SGMS1-207ENST00000602619 TCF12Q99081 682 aa5.05□□□□□ -1.6
SGMS1-207ENST00000602619 DUSP23Q9BVJ7 150 aa5.05□□□□□ -1.6
SGMS1-207ENST00000602619 TNKS2Q9H2K2 1166 aa5.05□□□□□ -1.6
SGMS1-207ENST00000602619 PNMA6FA0A0J9YX94 578 aa5.04□□□□□ -1.6
SGMS1-207ENST00000602619 A0A1W2PP55 124 aa5.04□□□□□ -1.6
SGMS1-207ENST00000602619 POLR3DP05423 398 aaPredicted RBP5.04□□□□□ -1.6
SGMS1-207ENST00000602619 INHBBP09529 407 aa5.04□□□□□ -1.6
SGMS1-207ENST00000602619 FGD1P98174 961 aa5.04□□□□□ -1.6
SGMS1-207ENST00000602619 PDE3AQ14432 1141 aa5.04□□□□□ -1.6
SGMS1-207ENST00000602619 ALG1LQ6GMV1 187 aa5.04□□□□□ -1.6
SGMS1-207ENST00000602619 ARHGAP27Q6ZUM4 889 aa5.04□□□□□ -1.6
SGMS1-207ENST00000602619 FANCD2OSQ96PS1 177 aa5.04□□□□□ -1.6
SGMS1-207ENST00000602619 NPHS2Q9NP85 383 aa5.04□□□□□ -1.6
SGMS1-207ENST00000602619 PRPF40AO75400 957 aaKnown RBP5.03□□□□□ -1.6
SGMS1-207ENST00000602619 B3GALT4O96024 378 aa5.03□□□□□ -1.6
SGMS1-207ENST00000602619 GLI1P08151 1106 aa5.03□□□□□ -1.6
SGMS1-207ENST00000602619 LIG1P18858 919 aa5.03□□□□□ -1.6
SGMS1-207ENST00000602619 ITPKAP23677 461 aa5.03□□□□□ -1.6
SGMS1-207ENST00000602619 CTSWP56202 376 aa5.03□□□□□ -1.6
SGMS1-207ENST00000602619 PTPN12Q05209 780 aaKnown RBP5.03□□□□□ -1.6
SGMS1-207ENST00000602619 ZP2Q05996 745 aa5.03□□□□□ -1.6
SGMS1-207ENST00000602619 SMYD4Q8IYR2 804 aaPredicted RBP5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms