RNA–Protein interactions for RNA: ENST00000602565.2

SGMS1-206, Transcript of sphingomyelin synthase 1, humanhuman

Gene SGMS1, Length 1,333 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-206ENST00000602565 HDXQ7Z353 690 aa11.68□□□□□ -0.54
SGMS1-206ENST00000602565 VPS37DQ86XT2 251 aa11.68□□□□□ -0.54
SGMS1-206ENST00000602565 C12orf50Q8NA57 414 aaPredicted RBP11.68□□□□□ -0.54
SGMS1-206ENST00000602565 EAF1Q96JC9 268 aaPredicted RBP11.68□□□□□ -0.54
SGMS1-206ENST00000602565 SPATA32Q96LK8 384 aa11.68□□□□□ -0.54
SGMS1-206ENST00000602565 TINF2Q9BSI4 451 aa11.68□□□□□ -0.54
SGMS1-206ENST00000602565 PICK1Q9NRD5 415 aa11.68□□□□□ -0.54
SGMS1-206ENST00000602565 UBP1Q9NZI7 540 aa11.68□□□□□ -0.54
SGMS1-206ENST00000602565 ROBO2Q9HCK4 1378 aa11.68□□□□□ -0.54
SGMS1-206ENST00000602565 CILPO75339 1184 aa11.67□□□□□ -0.54
SGMS1-206ENST00000602565 CDK11BP21127 795 aaKnown RBP11.67□□□□□ -0.54
SGMS1-206ENST00000602565 ID3Q02535 119 aa11.67□□□□□ -0.54
SGMS1-206ENST00000602565 SMG8Q8ND04 991 aaKnown RBP11.67□□□□□ -0.54
SGMS1-206ENST00000602565 NKD1Q969G9 470 aa11.67□□□□□ -0.54
SGMS1-206ENST00000602565 CEP41Q9BYV8 373 aa11.67□□□□□ -0.54
SGMS1-206ENST00000602565 SUGCTQ9HAC7 445 aa11.67□□□□□ -0.54
SGMS1-206ENST00000602565 CDK11AQ9UQ88 783 aaPredicted RBP11.67□□□□□ -0.54
SGMS1-206ENST00000602565 FAM221AA4D161 298 aa11.66□□□□□ -0.54
SGMS1-206ENST00000602565 DCDC2CA8MYV0 355 aa11.66□□□□□ -0.54
SGMS1-206ENST00000602565 SART1O43290 800 aaKnown RBP11.66□□□□□ -0.54
SGMS1-206ENST00000602565 ADH5P11766 374 aa11.66□□□□□ -0.54
SGMS1-206ENST00000602565 GJA8P48165 433 aa11.66□□□□□ -0.54
SGMS1-206ENST00000602565 PLPPR2Q96GM1 343 aa11.66□□□□□ -0.54
SGMS1-206ENST00000602565 SYNGAP1Q96PV0 1343 aa11.66□□□□□ -0.54
SGMS1-206ENST00000602565 IREB2P48200 963 aaKnown RBP11.65□□□□□ -0.54
SGMS1-206ENST00000602565 LRFN4Q6PJG9 635 aa11.65□□□□□ -0.54
SGMS1-206ENST00000602565 FBXO27Q8NI29 283 aa11.65□□□□□ -0.54
SGMS1-206ENST00000602565 WFDC12Q8WWY7 111 aa11.65□□□□□ -0.54
SGMS1-206ENST00000602565 SNCAIPQ9Y6H5 919 aa11.65□□□□□ -0.54
SGMS1-206ENST00000602565 PRAMEF27A3QJZ7 478 aa11.64□□□□□ -0.55
SGMS1-206ENST00000602565 TMPRSS2O15393 492 aa11.64□□□□□ -0.55
SGMS1-206ENST00000602565 CRKP46108 304 aa11.64□□□□□ -0.55
SGMS1-206ENST00000602565 SOX4Q06945 474 aaPredicted RBP11.64□□□□□ -0.55
SGMS1-206ENST00000602565 INPP5AQ14642 412 aa11.64□□□□□ -0.55
SGMS1-206ENST00000602565 MBTPS1Q14703 1052 aa11.64□□□□□ -0.55
SGMS1-206ENST00000602565 SF3A1Q15459 793 aaKnown RBP11.64□□□□□ -0.55
SGMS1-206ENST00000602565 SEZ6Q53EL9 994 aa11.64□□□□□ -0.55
SGMS1-206ENST00000602565 REC114Q7Z4M0 266 aa11.64□□□□□ -0.55
SGMS1-206ENST00000602565 FAM177A1Q8N128 213 aaPredicted RBP11.64□□□□□ -0.55
SGMS1-206ENST00000602565 LRRC3Q9BY71 257 aa11.64□□□□□ -0.55
SGMS1-206ENST00000602565 CSADQ9Y600 493 aa11.64□□□□□ -0.55
SGMS1-206ENST00000602565 GAS2O43903 313 aaKnown RBP11.63□□□□□ -0.55
SGMS1-206ENST00000602565 NOS3P29474 1203 aa11.63□□□□□ -0.55
SGMS1-206ENST00000602565 MCM4P33991 863 aa11.63□□□□□ -0.55
SGMS1-206ENST00000602565 ADGRE1Q14246 886 aa11.63□□□□□ -0.55
SGMS1-206ENST00000602565 ZC3H12AQ5D1E8 599 aaKnown RBP11.63□□□□□ -0.55
SGMS1-206ENST00000602565 DYMQ7RTS9 669 aa11.63□□□□□ -0.55
SGMS1-206ENST00000602565 RASGRP4Q8TDF6 673 aa11.63□□□□□ -0.55
SGMS1-206ENST00000602565 ATXN3LQ9H3M9 355 aa11.63□□□□□ -0.55
SGMS1-206ENST00000602565 PPP1R9AQ9ULJ8 1098 aa11.63□□□□□ -0.55
SGMS1-206ENST00000602565 DRD2P14416 443 aa11.62□□□□□ -0.55
SGMS1-206ENST00000602565 CANXP27824 592 aaKnown RBP11.62□□□□□ -0.55
SGMS1-206ENST00000602565 DNAJA1P31689 397 aaKnown RBP11.62□□□□□ -0.55
SGMS1-206ENST00000602565 CDK8P49336 464 aa11.62□□□□□ -0.55
SGMS1-206ENST00000602565 TXNRD3Q86VQ6 643 aa11.62□□□□□ -0.55
SGMS1-206ENST00000602565 C12orf40Q86WS4 652 aa11.62□□□□□ -0.55
SGMS1-206ENST00000602565 SLC43A3Q8NBI5 491 aa11.62□□□□□ -0.55
SGMS1-206ENST00000602565 DCAF5Q96JK2 942 aa11.62□□□□□ -0.55
SGMS1-206ENST00000602565 PCDHGC5Q9Y5F6 944 aa11.62□□□□□ -0.55
SGMS1-206ENST00000602565 ERVK-24P63145 666 aa11.61□□□□□ -0.55
SGMS1-206ENST00000602565 ARID5AQ03989 594 aa11.61□□□□□ -0.55
SGMS1-206ENST00000602565 PIDD1Q9HB75 910 aa11.61□□□□□ -0.55
SGMS1-206ENST00000602565 CRIM1Q9NZV1 1036 aa11.61□□□□□ -0.55
SGMS1-206ENST00000602565 KRBA1A5PL33 1030 aa11.6□□□□□ -0.55
SGMS1-206ENST00000602565 TIAF1O95411 115 aa11.6□□□□□ -0.55
SGMS1-206ENST00000602565 COL9A2Q14055 689 aaPredicted RBP11.6□□□□□ -0.55
SGMS1-206ENST00000602565 SLITRK4Q8IW52 837 aa11.6□□□□□ -0.55
SGMS1-206ENST00000602565 UBXN4Q92575 508 aa11.6□□□□□ -0.55
SGMS1-206ENST00000602565 EFR3BQ9Y2G0 817 aa11.6□□□□□ -0.55
SGMS1-206ENST00000602565 ASPAP45381 313 aa11.6□□□□□ -0.55
SGMS1-206ENST00000602565 ZNF165P49910 485 aa11.6□□□□□ -0.55
SGMS1-206ENST00000602565 PDE4BQ07343 736 aa11.6□□□□□ -0.55
SGMS1-206ENST00000602565 PPM1JQ5JR12 505 aa11.6□□□□□ -0.55
SGMS1-206ENST00000602565 Q6ZS46 218 aa11.6□□□□□ -0.55
SGMS1-206ENST00000602565 FANCD2OSQ96PS1 177 aa11.6□□□□□ -0.55
SGMS1-206ENST00000602565 BRMS1Q9HCU9 246 aa11.6□□□□□ -0.55
SGMS1-206ENST00000602565 HIF3AQ9Y2N7 669 aa11.6□□□□□ -0.55
SGMS1-206ENST00000602565 GRIN3BO60391 1043 aa11.59□□□□□ -0.55
SGMS1-206ENST00000602565 CHRNA4P43681 627 aa11.59□□□□□ -0.55
SGMS1-206ENST00000602565 PREPP48147 710 aa11.59□□□□□ -0.55
SGMS1-206ENST00000602565 USP11P51784 963 aa11.59□□□□□ -0.55
SGMS1-206ENST00000602565 ETF1P62495 437 aaKnown RBP11.59□□□□□ -0.55
SGMS1-206ENST00000602565 GINM1Q9NU53 330 aa11.59□□□□□ -0.55
SGMS1-206ENST00000602565 ACTL7BQ9Y614 415 aa11.59□□□□□ -0.55
SGMS1-206ENST00000602565 GFRA2O00451 464 aa11.58□□□□□ -0.56
SGMS1-206ENST00000602565 ATF4P18848 351 aaPredicted RBP11.58□□□□□ -0.56
SGMS1-206ENST00000602565 NASPP49321 788 aaPredicted RBP11.58□□□□□ -0.56
SGMS1-206ENST00000602565 GK5Q6ZS86 529 aa11.58□□□□□ -0.56
SGMS1-206ENST00000602565 CYFIP1Q7L576 1253 aa11.58□□□□□ -0.56
SGMS1-206ENST00000602565 C2CD4AQ8NCU7 369 aaPredicted RBP11.58□□□□□ -0.56
SGMS1-206ENST00000602565 SEC16BQ96JE7 1060 aa11.58□□□□□ -0.56
SGMS1-206ENST00000602565 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.58□□□□□ -0.56
SGMS1-206ENST00000602565 TANGO6Q9C0B7 1094 aa11.58□□□□□ -0.56
SGMS1-206ENST00000602565 TACC3Q9Y6A5 838 aa11.58□□□□□ -0.56
SGMS1-206ENST00000602565 C1QTNF9BB2RNN3 333 aa11.57□□□□□ -0.56
SGMS1-206ENST00000602565 RNGTTO60942 597 aaKnown RBP11.57□□□□□ -0.56
SGMS1-206ENST00000602565 RASSF7Q02833 373 aa11.57□□□□□ -0.56
SGMS1-206ENST00000602565 KCNMA1Q12791 1236 aa11.57□□□□□ -0.56
SGMS1-206ENST00000602565 TTLL4Q14679 1199 aa11.57□□□□□ -0.56
SGMS1-206ENST00000602565 UVSSAQ2YD98 709 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms