RNA–Protein interactions for RNA: ENST00000601538.5

SHANK2-218, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SHANK2, Length 9,062 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-218ENST00000601538 ZNF354CQ86Y25 554 aa13.6□□□□□ -0.23
SHANK2-218ENST00000601538 IFNKQ9P0W0 207 aa13.6□□□□□ -0.23
SHANK2-218ENST00000601538 TRIM68Q6AZZ1 485 aa13.6□□□□□ -0.23
SHANK2-218ENST00000601538 AGTPBP1Q9UPW5 1226 aa13.6□□□□□ -0.23
SHANK2-218ENST00000601538 FAM13AO94988 1023 aa13.6□□□□□ -0.23
SHANK2-218ENST00000601538 MYL5Q02045 173 aa13.6□□□□□ -0.23
SHANK2-218ENST00000601538 AOX1Q06278 1338 aa13.6□□□□□ -0.23
SHANK2-218ENST00000601538 RNASELQ05823 741 aaKnown RBP13.6□□□□□ -0.23
SHANK2-218ENST00000601538 ISM2Q6H9L7 571 aa13.6□□□□□ -0.23
SHANK2-218ENST00000601538 MAIP1Q8WWC4 291 aa13.6□□□□□ -0.23
SHANK2-218ENST00000601538 NPC1L1Q9UHC9 1359 aa13.6□□□□□ -0.23
SHANK2-218ENST00000601538 SPECC1L-ADORA2AF8WAN1 911 aa13.6□□□□□ -0.23
SHANK2-218ENST00000601538 ANKRD27Q96NW4 1050 aa13.6□□□□□ -0.23
SHANK2-218ENST00000601538 DAAM1Q9Y4D1 1078 aa13.6□□□□□ -0.23
SHANK2-218ENST00000601538 RTL9Q8NET4 1388 aa13.59□□□□□ -0.23
SHANK2-218ENST00000601538 ZNF75DP51815 510 aa13.59□□□□□ -0.23
SHANK2-218ENST00000601538 HELBQ8NG08 1087 aaPredicted RBP13.59□□□□□ -0.23
SHANK2-218ENST00000601538 AFMP43652 599 aa13.59□□□□□ -0.23
SHANK2-218ENST00000601538 ZC3H15Q8WU90 426 aaKnown RBP13.59□□□□□ -0.23
SHANK2-218ENST00000601538 PDE6BP35913 854 aa13.59□□□□□ -0.23
SHANK2-218ENST00000601538 SPTLC3Q9NUV7 552 aa13.59□□□□□ -0.23
SHANK2-218ENST00000601538 PPP1R12AO14974 1030 aaPredicted RBP13.59□□□□□ -0.23
SHANK2-218ENST00000601538 ZBTB43O43298 467 aa13.59□□□□□ -0.23
SHANK2-218ENST00000601538 ARHGAP18Q8N392 663 aa13.59□□□□□ -0.23
SHANK2-218ENST00000601538 MIS12Q9H081 205 aa13.59□□□□□ -0.23
SHANK2-218ENST00000601538 PHBP35232 272 aa13.59□□□□□ -0.23
SHANK2-218ENST00000601538 LMNB2Q03252 620 aa13.59□□□□□ -0.23
SHANK2-218ENST00000601538 CUL4BQ13620 913 aa13.59□□□□□ -0.23
SHANK2-218ENST00000601538 DACT3Q96B18 629 aaPredicted RBP13.59□□□□□ -0.23
SHANK2-218ENST00000601538 TRIM75PA6NK02 468 aa13.59□□□□□ -0.23
SHANK2-218ENST00000601538 FAM204AQ9H8W3 233 aa13.59□□□□□ -0.23
SHANK2-218ENST00000601538 WTAPQ15007 396 aa13.58□□□□□ -0.23
SHANK2-218ENST00000601538 ORC6Q9Y5N6 252 aa13.58□□□□□ -0.23
SHANK2-218ENST00000601538 MAN1A2O60476 641 aa13.58□□□□□ -0.24
SHANK2-218ENST00000601538 KLHDC4Q8TBB5 520 aa13.58□□□□□ -0.24
SHANK2-218ENST00000601538 MORC2Q9Y6X9 1032 aaPredicted RBP13.58□□□□□ -0.24
SHANK2-218ENST00000601538 UAP1Q16222 522 aaPredicted RBP13.58□□□□□ -0.24
SHANK2-218ENST00000601538 TMTC1Q8IUR5 882 aa13.58□□□□□ -0.24
SHANK2-218ENST00000601538 STK24Q9Y6E0 443 aa13.58□□□□□ -0.24
SHANK2-218ENST00000601538 CALM1P0DP23 149 aa13.58□□□□□ -0.24
SHANK2-218ENST00000601538 CALM2P0DP24 149 aa13.58□□□□□ -0.24
SHANK2-218ENST00000601538 CALM3P0DP25 149 aa13.58□□□□□ -0.24
SHANK2-218ENST00000601538 PEX19P40855 299 aa13.58□□□□□ -0.24
SHANK2-218ENST00000601538 PHEXP78562 749 aa13.58□□□□□ -0.24
SHANK2-218ENST00000601538 PSMD6Q15008 389 aa13.58□□□□□ -0.24
SHANK2-218ENST00000601538 PPP1R21Q6ZMI0 780 aa13.58□□□□□ -0.24
SHANK2-218ENST00000601538 CTTNBP2NLQ9P2B4 639 aa13.58□□□□□ -0.24
SHANK2-218ENST00000601538 TMEM110-MUSTN1A8MSY1 372 aa13.58□□□□□ -0.24
SHANK2-218ENST00000601538 IQUBQ8NA54 791 aa13.58□□□□□ -0.24
SHANK2-218ENST00000601538 USP6NLQ92738 828 aa13.58□□□□□ -0.24
SHANK2-218ENST00000601538 CHMP2AO43633 222 aa13.58□□□□□ -0.24
SHANK2-218ENST00000601538 ALG1Q9BT22 464 aa13.58□□□□□ -0.24
SHANK2-218ENST00000601538 C6orf50Q9HD87 102 aa13.58□□□□□ -0.24
SHANK2-218ENST00000601538 ARID5AQ03989 594 aa13.58□□□□□ -0.24
SHANK2-218ENST00000601538 RAD51AP2Q09MP3 1159 aa13.58□□□□□ -0.24
SHANK2-218ENST00000601538 RTN1Q16799 776 aa13.58□□□□□ -0.24
SHANK2-218ENST00000601538 IRX5P78411 483 aaPredicted RBP13.57□□□□□ -0.24
SHANK2-218ENST00000601538 LIN9Q5TKA1 542 aa13.57□□□□□ -0.24
SHANK2-218ENST00000601538 RBSNQ9H1K0 784 aa13.57□□□□□ -0.24
SHANK2-218ENST00000601538 KARSQ15046 597 aaKnown RBP13.57□□□□□ -0.24
SHANK2-218ENST00000601538 ANKRD20A4Q4UJ75 823 aa13.57□□□□□ -0.24
SHANK2-218ENST00000601538 ANKRD20A8PQ5CZ79 823 aa13.57□□□□□ -0.24
SHANK2-218ENST00000601538 ANKRD20A2Q5SQ80 823 aa13.57□□□□□ -0.24
SHANK2-218ENST00000601538 ANKRD20A1Q5TYW2 823 aa13.57□□□□□ -0.24
SHANK2-218ENST00000601538 KIFC2Q96AC6 838 aa13.57□□□□□ -0.24
SHANK2-218ENST00000601538 WDR46O15213 610 aaKnown RBP13.57□□□□□ -0.24
SHANK2-218ENST00000601538 DIXDC1Q155Q3 683 aa13.57□□□□□ -0.24
SHANK2-218ENST00000601538 N4BP2L2Q92802 583 aaPredicted RBP13.57□□□□□ -0.24
SHANK2-218ENST00000601538 GON4LQ3T8J9 2241 aa13.57□□□□□ -0.24
SHANK2-218ENST00000601538 HLA-DOAP06340 250 aa13.57□□□□□ -0.24
SHANK2-218ENST00000601538 GSTO1P78417 241 aa13.57□□□□□ -0.24
SHANK2-218ENST00000601538 PALM3A6NDB9 673 aaPredicted RBP13.57□□□□□ -0.24
SHANK2-218ENST00000601538 FAM177BA6PVY3 158 aa13.57□□□□□ -0.24
SHANK2-218ENST00000601538 RILPQ96NA2 401 aa13.57□□□□□ -0.24
SHANK2-218ENST00000601538 CNOT10Q9H9A5 744 aaKnown RBP13.57□□□□□ -0.24
SHANK2-218ENST00000601538 SCOCQ9UIL1 159 aa13.57□□□□□ -0.24
SHANK2-218ENST00000601538 PAIP2BQ9ULR5 123 aaKnown RBP13.57□□□□□ -0.24
SHANK2-218ENST00000601538 IQSEC3Q9UPP2 1182 aaPredicted RBP13.57□□□□□ -0.24
SHANK2-218ENST00000601538 B4DLN1 442 aa13.57□□□□□ -0.24
SHANK2-218ENST00000601538 RGS16O15492 202 aaPredicted RBP13.57□□□□□ -0.24
SHANK2-218ENST00000601538 MRPL12P52815 198 aaKnown RBP13.57□□□□□ -0.24
SHANK2-218ENST00000601538 LZICQ8WZA0 190 aa13.57□□□□□ -0.24
SHANK2-218ENST00000601538 ESR2Q92731 530 aa13.57□□□□□ -0.24
SHANK2-218ENST00000601538 EPB41P11171 864 aaKnown RBP13.56□□□□□ -0.24
SHANK2-218ENST00000601538 CAPS2Q9BXY5 557 aa13.56□□□□□ -0.24
SHANK2-218ENST00000601538 DDX21Q9NR30 783 aaKnown RBP eCLIP13.56□□□□□ -0.24
SHANK2-218ENST00000601538 HSPA8P11142 646 aaKnown RBP13.56□□□□□ -0.24
SHANK2-218ENST00000601538 SPOPO43791 374 aa13.56□□□□□ -0.24
SHANK2-218ENST00000601538 CCDC93Q567U6 631 aa13.56□□□□□ -0.24
SHANK2-218ENST00000601538 LDHCP07864 332 aa13.56□□□□□ -0.24
SHANK2-218ENST00000601538 SLC8A3P57103 927 aa13.56□□□□□ -0.24
SHANK2-218ENST00000601538 CNNM4Q6P4Q7 775 aa13.56□□□□□ -0.24
SHANK2-218ENST00000601538 LEO1Q8WVC0 666 aaPredicted RBP13.56□□□□□ -0.24
SHANK2-218ENST00000601538 STX10O60499 249 aa13.56□□□□□ -0.24
SHANK2-218ENST00000601538 HMGXB3Q12766 1538 aa13.56□□□□□ -0.24
SHANK2-218ENST00000601538 IFIT1BQ5T764 474 aaKnown RBP13.56□□□□□ -0.24
SHANK2-218ENST00000601538 CCDC89Q8N998 374 aa13.56□□□□□ -0.24
SHANK2-218ENST00000601538 NLRP7Q8WX94 980 aa13.56□□□□□ -0.24
SHANK2-218ENST00000601538 ANKIB1Q9P2G1 1089 aa13.56□□□□□ -0.24
SHANK2-218ENST00000601538 SYF2O95926 243 aaKnown RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms