RNA–Protein interactions for RNA: ENST00000601319.1

HERC3-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 2

Gene HERC3, Length 1,298 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-214ENST00000601319 CFHR5Q9BXR6 569 aa20.99■□□□□ 0.95
HERC3-214ENST00000601319 PIH1D3Q9NQM4 214 aaKnown RBP20.99■□□□□ 0.95
HERC3-214ENST00000601319 PHIPQ8WWQ0 1821 aa20.99■□□□□ 0.95
HERC3-214ENST00000601319 PTPRFP10586 1907 aa20.98■□□□□ 0.95
HERC3-214ENST00000601319 MYH1P12882 1939 aa20.98■□□□□ 0.95
HERC3-214ENST00000601319 SPDYE5A6NIY4 337 aa20.98■□□□□ 0.95
HERC3-214ENST00000601319 APBB1O00213 710 aa20.98■□□□□ 0.95
HERC3-214ENST00000601319 IFIT2P09913 472 aaKnown RBP20.98■□□□□ 0.95
HERC3-214ENST00000601319 GJA5P36382 358 aa20.98■□□□□ 0.95
HERC3-214ENST00000601319 OPTNQ96CV9 577 aa20.98■□□□□ 0.95
HERC3-214ENST00000601319 ELP3Q9H9T3 547 aa20.98■□□□□ 0.95
HERC3-214ENST00000601319 DDX4Q9NQI0 724 aaKnown RBP20.98■□□□□ 0.95
HERC3-214ENST00000601319 ZNF112Q9UJU3 913 aa20.98■□□□□ 0.95
HERC3-214ENST00000601319 SNCAIPQ9Y6H5 919 aa20.98■□□□□ 0.95
HERC3-214ENST00000601319 NAV1Q8NEY1 1877 aa20.97■□□□□ 0.95
HERC3-214ENST00000601319 NOM1Q5C9Z4 860 aaKnown RBP20.97■□□□□ 0.95
HERC3-214ENST00000601319 ZFPM1Q8IX07 1006 aa20.97■□□□□ 0.95
HERC3-214ENST00000601319 NOL10Q9BSC4 688 aaKnown RBP20.97■□□□□ 0.95
HERC3-214ENST00000601319 LRRCC1Q9C099 1032 aa20.97■□□□□ 0.95
HERC3-214ENST00000601319 BAG3O95817 575 aa20.96■□□□□ 0.95
HERC3-214ENST00000601319 ALDH1A1P00352 501 aa20.96■□□□□ 0.95
HERC3-214ENST00000601319 PLCG2P16885 1265 aa20.96■□□□□ 0.95
HERC3-214ENST00000601319 PPP4CP60510 307 aa20.96■□□□□ 0.95
HERC3-214ENST00000601319 SH3BP5LQ7L8J4 393 aa20.96■□□□□ 0.95
HERC3-214ENST00000601319 TESPA1A2RU30 521 aaPredicted RBP20.95■□□□□ 0.94
HERC3-214ENST00000601319 MAP3K10Q02779 954 aa20.95■□□□□ 0.94
HERC3-214ENST00000601319 PICALMQ13492 652 aa20.95■□□□□ 0.94
HERC3-214ENST00000601319 TTF1Q15361 905 aaPredicted RBP20.95■□□□□ 0.94
HERC3-214ENST00000601319 NOL9Q5SY16 702 aaKnown RBP20.95■□□□□ 0.94
HERC3-214ENST00000601319 MIGA2Q7L4E1 593 aa20.95■□□□□ 0.94
HERC3-214ENST00000601319 ADGRA1Q86SQ6 560 aa20.95■□□□□ 0.94
HERC3-214ENST00000601319 ERO1BQ86YB8 467 aa20.95■□□□□ 0.94
HERC3-214ENST00000601319 IFNL1Q8IU54 200 aa20.95■□□□□ 0.94
HERC3-214ENST00000601319 CERS3Q8IU89 383 aa20.95■□□□□ 0.94
HERC3-214ENST00000601319 DCTPP1Q9H773 170 aa20.95■□□□□ 0.94
HERC3-214ENST00000601319 TEX11Q8IYF3 940 aa20.94■□□□□ 0.94
HERC3-214ENST00000601319 ZKSCAN4Q969J2 545 aaPredicted RBP20.94■□□□□ 0.94
HERC3-214ENST00000601319 DDTLA6NHG4 134 aaPredicted RBP20.93■□□□□ 0.94
HERC3-214ENST00000601319 IDH1O75874 414 aaKnown RBP20.93■□□□□ 0.94
HERC3-214ENST00000601319 INPP5BP32019 993 aa20.93■□□□□ 0.94
HERC3-214ENST00000601319 MAP3K12Q12852 859 aa20.93■□□□□ 0.94
HERC3-214ENST00000601319 PPIL2Q13356 520 aa20.93■□□□□ 0.94
HERC3-214ENST00000601319 ZSCAN29Q8IWY8 852 aaPredicted RBP20.93■□□□□ 0.94
HERC3-214ENST00000601319 SH3RF3Q8TEJ3 882 aaPredicted RBP20.93■□□□□ 0.94
HERC3-214ENST00000601319 CNKSR2Q8WXI2 1034 aa20.93■□□□□ 0.94
HERC3-214ENST00000601319 OTUD5Q96G74 571 aa20.93■□□□□ 0.94
HERC3-214ENST00000601319 MS4A4AQ96JQ5 239 aa20.93■□□□□ 0.94
HERC3-214ENST00000601319 OSBPL5Q9H0X9 879 aaPredicted RBP20.93■□□□□ 0.94
HERC3-214ENST00000601319 ANTXR1Q9H6X2 564 aa20.93■□□□□ 0.94
HERC3-214ENST00000601319 AATFQ9NY61 560 aaKnown RBP eCLIP20.93■□□□□ 0.94
HERC3-214ENST00000601319 NDUFB9Q9Y6M9 179 aa20.93■□□□□ 0.94
HERC3-214ENST00000601319 PHF20L1A8MW92 1017 aa20.92■□□□□ 0.94
HERC3-214ENST00000601319 IGF2BP3O00425 579 aaKnown RBP eCLIP20.92■□□□□ 0.94
HERC3-214ENST00000601319 ATP5JP18859 108 aa20.92■□□□□ 0.94
HERC3-214ENST00000601319 GTF2A2P52657 109 aa20.92■□□□□ 0.94
HERC3-214ENST00000601319 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.92■□□□□ 0.94
HERC3-214ENST00000601319 PCDHB15Q9Y5E8 787 aa20.92■□□□□ 0.94
HERC3-214ENST00000601319 TBC1D12O60347 775 aa20.91■□□□□ 0.94
HERC3-214ENST00000601319 CYP7A1P22680 504 aa20.91■□□□□ 0.94
HERC3-214ENST00000601319 PPATQ06203 517 aa20.91■□□□□ 0.94
HERC3-214ENST00000601319 OTUD7BQ6GQQ9 843 aa20.91■□□□□ 0.94
HERC3-214ENST00000601319 FLT1P17948 1338 aa20.9■□□□□ 0.94
HERC3-214ENST00000601319 AAMPQ13685 434 aa20.9■□□□□ 0.94
HERC3-214ENST00000601319 MAGEB6Q8N7X4 407 aa20.9■□□□□ 0.94
HERC3-214ENST00000601319 CRBNQ96SW2 442 aa20.9■□□□□ 0.94
HERC3-214ENST00000601319 LOC285556D6RIA3 1793 aa20.9■□□□□ 0.94
HERC3-214ENST00000601319 TBC1D8O95759 1140 aa20.89■□□□□ 0.93
HERC3-214ENST00000601319 SCYL3Q8IZE3 742 aa20.89■□□□□ 0.93
HERC3-214ENST00000601319 BRI3BPQ8WY22 251 aa20.89■□□□□ 0.93
HERC3-214ENST00000601319 PTPN18Q99952 460 aa20.89■□□□□ 0.93
HERC3-214ENST00000601319 DHX36Q9H2U1 1008 aaKnown RBP20.89■□□□□ 0.93
HERC3-214ENST00000601319 ZCCHC17Q9NP64 241 aaKnown RBP20.89■□□□□ 0.93
HERC3-214ENST00000601319 CCL15-CCL14A0A0B4J2E2 113 aa20.88■□□□□ 0.93
HERC3-214ENST00000601319 GPR25O00155 361 aa20.88■□□□□ 0.93
HERC3-214ENST00000601319 GOLIM4O00461 696 aa20.88■□□□□ 0.93
HERC3-214ENST00000601319 IRF6O14896 467 aa20.88■□□□□ 0.93
HERC3-214ENST00000601319 CETPP11597 493 aa20.88■□□□□ 0.93
HERC3-214ENST00000601319 SNAPC2Q13487 334 aa20.88■□□□□ 0.93
HERC3-214ENST00000601319 CCL15Q16663 113 aa20.88■□□□□ 0.93
HERC3-214ENST00000601319 DNAJC2Q99543 621 aaKnown RBP20.88■□□□□ 0.93
HERC3-214ENST00000601319 HAUS7Q99871 368 aa20.88■□□□□ 0.93
HERC3-214ENST00000601319 PAG1Q9NWQ8 432 aa20.88■□□□□ 0.93
HERC3-214ENST00000601319 HERC5Q9UII4 1024 aaKnown RBP20.88■□□□□ 0.93
HERC3-214ENST00000601319 MYH8P13535 1937 aa20.87■□□□□ 0.93
HERC3-214ENST00000601319 SMARCA5O60264 1052 aaPredicted RBP20.87■□□□□ 0.93
HERC3-214ENST00000601319 PDE6AP16499 860 aa20.87■□□□□ 0.93
HERC3-214ENST00000601319 KCNH4Q9UQ05 1017 aa20.87■□□□□ 0.93
HERC3-214ENST00000601319 CTNND1O60716 968 aaKnown RBP20.86■□□□□ 0.93
HERC3-214ENST00000601319 DYNLL1P63167 89 aaKnown RBP20.86■□□□□ 0.93
HERC3-214ENST00000601319 TGFBRAP1Q8WUH2 860 aa20.86■□□□□ 0.93
HERC3-214ENST00000601319 ZNF296Q8WUU4 475 aaPredicted RBP20.86■□□□□ 0.93
HERC3-214ENST00000601319 RIOK1Q9BRS2 568 aaKnown RBP20.86■□□□□ 0.93
HERC3-214ENST00000601319 ECHDC1Q9NTX5 307 aa20.86■□□□□ 0.93
HERC3-214ENST00000601319 PI4KBQ9UBF8 816 aa20.86■□□□□ 0.93
HERC3-214ENST00000601319 TCRBV5S4A2TA0A5A2 114 aa20.85■□□□□ 0.93
HERC3-214ENST00000601319 SLC9C2Q5TAH2 1124 aa20.85■□□□□ 0.93
HERC3-214ENST00000601319 METTL16Q86W50 562 aaKnown RBP20.85■□□□□ 0.93
HERC3-214ENST00000601319 MAPKAPK5Q8IW41 473 aa20.85■□□□□ 0.93
HERC3-214ENST00000601319 MIGA1Q8NAN2 632 aa20.85■□□□□ 0.93
HERC3-214ENST00000601319 GPATCH3Q96I76 525 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 123 ms