RNA–Protein interactions for RNA: ENST00000600778.3

SOX2-OT-233, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 762 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-233ENST00000600778 SNRKQ9NRH2 765 aa14.23□□□□□ -0.13
SOX2-OT-233ENST00000600778 NOP58Q9Y2X3 529 aaKnown RBP14.23□□□□□ -0.13
SOX2-OT-233ENST00000600778 TRIM17Q9Y577 477 aa14.23□□□□□ -0.13
SOX2-OT-233ENST00000600778 GPR75-ASB3A0A0A6YYF3 556 aa14.22□□□□□ -0.13
SOX2-OT-233ENST00000600778 WDHD1O75717 1129 aaPredicted RBP14.22□□□□□ -0.13
SOX2-OT-233ENST00000600778 LDHCP07864 332 aa14.22□□□□□ -0.13
SOX2-OT-233ENST00000600778 CETPP11597 493 aa14.22□□□□□ -0.13
SOX2-OT-233ENST00000600778 SP3Q02447 781 aa14.22□□□□□ -0.13
SOX2-OT-233ENST00000600778 PPATQ06203 517 aa14.22□□□□□ -0.13
SOX2-OT-233ENST00000600778 SNAPC2Q13487 334 aa14.22□□□□□ -0.13
SOX2-OT-233ENST00000600778 TAF1CQ15572 869 aaPredicted RBP14.22□□□□□ -0.13
SOX2-OT-233ENST00000600778 SH3BP5LQ7L8J4 393 aa14.22□□□□□ -0.13
SOX2-OT-233ENST00000600778 ERO1AQ96HE7 468 aa14.22□□□□□ -0.13
SOX2-OT-233ENST00000600778 CCDC8Q9H0W5 538 aaPredicted RBP14.22□□□□□ -0.13
SOX2-OT-233ENST00000600778 LRP2BPQ9P2M1 347 aa14.22□□□□□ -0.13
SOX2-OT-233ENST00000600778 RCAN3Q9UKA8 241 aa14.22□□□□□ -0.13
SOX2-OT-233ENST00000600778 DDTLA6NHG4 134 aaPredicted RBP14.21□□□□□ -0.13
SOX2-OT-233ENST00000600778 SLURP2P0DP57 97 aa14.21□□□□□ -0.13
SOX2-OT-233ENST00000600778 MS4A1P11836 297 aa14.21□□□□□ -0.13
SOX2-OT-233ENST00000600778 RHBDL3P58872 404 aa14.21□□□□□ -0.13
SOX2-OT-233ENST00000600778 OTOP1Q7RTM1 612 aa14.21□□□□□ -0.13
SOX2-OT-233ENST00000600778 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.21□□□□□ -0.13
SOX2-OT-233ENST00000600778 BTBD19C9JJ37 291 aa14.2□□□□□ -0.14
SOX2-OT-233ENST00000600778 NOL9Q5SY16 702 aaKnown RBP14.2□□□□□ -0.14
SOX2-OT-233ENST00000600778 RFX7Q2KHR2 1363 aa14.2□□□□□ -0.14
SOX2-OT-233ENST00000600778 ATRNL1Q5VV63 1379 aa14.2□□□□□ -0.14
SOX2-OT-233ENST00000600778 PHF20L1A8MW92 1017 aa14.19□□□□□ -0.14
SOX2-OT-233ENST00000600778 TNRC18O15417 2968 aaPredicted RBP14.19□□□□□ -0.14
SOX2-OT-233ENST00000600778 CYP2E1P05181 493 aaPredicted RBP14.19□□□□□ -0.14
SOX2-OT-233ENST00000600778 ZAP70P43403 619 aa14.19□□□□□ -0.14
SOX2-OT-233ENST00000600778 NAA16Q6N069 864 aaPredicted RBP14.19□□□□□ -0.14
SOX2-OT-233ENST00000600778 EAF2Q96CJ1 260 aaPredicted RBP14.19□□□□□ -0.14
SOX2-OT-233ENST00000600778 EFCC1Q9HA90 598 aa14.19□□□□□ -0.14
SOX2-OT-233ENST00000600778 TLR7Q9NYK1 1049 aaKnown RBP14.19□□□□□ -0.14
SOX2-OT-233ENST00000600778 DBNLQ9UJU6 430 aaKnown RBP14.19□□□□□ -0.14
SOX2-OT-233ENST00000600778 EXOC6BQ9Y2D4 811 aa14.19□□□□□ -0.14
SOX2-OT-233ENST00000600778 COG6Q9Y2V7 657 aa14.19□□□□□ -0.14
SOX2-OT-233ENST00000600778 HTTP42858 3142 aa14.18□□□□□ -0.14
SOX2-OT-233ENST00000600778 MAP4K4O95819 1239 aaPredicted RBP14.18□□□□□ -0.14
SOX2-OT-233ENST00000600778 CAP1Q01518 475 aa14.18□□□□□ -0.14
SOX2-OT-233ENST00000600778 MAP3K10Q02779 954 aa14.18□□□□□ -0.14
SOX2-OT-233ENST00000600778 TEX11Q8IYF3 940 aa14.18□□□□□ -0.14
SOX2-OT-233ENST00000600778 SCYL3Q8IZE3 742 aa14.18□□□□□ -0.14
SOX2-OT-233ENST00000600778 ZNF512BQ96KM6 892 aaPredicted RBP14.18□□□□□ -0.14
SOX2-OT-233ENST00000600778 NOL10Q9BSC4 688 aaKnown RBP14.18□□□□□ -0.14
SOX2-OT-233ENST00000600778 ZCCHC17Q9NP64 241 aaKnown RBP14.18□□□□□ -0.14
SOX2-OT-233ENST00000600778 PICK1Q9NRD5 415 aa14.18□□□□□ -0.14
SOX2-OT-233ENST00000600778 KCNH4Q9UQ05 1017 aa14.18□□□□□ -0.14
SOX2-OT-233ENST00000600778 PTPN22Q9Y2R2 807 aa14.18□□□□□ -0.14
SOX2-OT-233ENST00000600778 DOCK2Q92608 1830 aa14.18□□□□□ -0.14
SOX2-OT-233ENST00000600778 CENPFP49454 3210 aa14.17□□□□□ -0.14
SOX2-OT-233ENST00000600778 TLR2O60603 784 aa14.17□□□□□ -0.14
SOX2-OT-233ENST00000600778 NPM3O75607 178 aaKnown RBP14.17□□□□□ -0.14
SOX2-OT-233ENST00000600778 ERC1Q8IUD2 1116 aa14.17□□□□□ -0.14
SOX2-OT-233ENST00000600778 SH3RF3Q8TEJ3 882 aaPredicted RBP14.17□□□□□ -0.14
SOX2-OT-233ENST00000600778 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.17□□□□□ -0.14
SOX2-OT-233ENST00000600778 AATFQ9NY61 560 aaKnown RBP eCLIP14.17□□□□□ -0.14
SOX2-OT-233ENST00000600778 DDX19BQ9UMR2 479 aa14.17□□□□□ -0.14
SOX2-OT-233ENST00000600778 ZHX2Q9Y6X8 837 aa14.17□□□□□ -0.14
SOX2-OT-233ENST00000600778 FAM196BA6NMK8 535 aa14.16□□□□□ -0.14
SOX2-OT-233ENST00000600778 PDHXO00330 501 aa14.16□□□□□ -0.14
SOX2-OT-233ENST00000600778 BAG3O95817 575 aa14.16□□□□□ -0.14
SOX2-OT-233ENST00000600778 PTPRAP18433 802 aa14.16□□□□□ -0.14
SOX2-OT-233ENST00000600778 ANKRD23Q86SG2 305 aa14.16□□□□□ -0.14
SOX2-OT-233ENST00000600778 OSBPL5Q9H0X9 879 aaPredicted RBP14.16□□□□□ -0.14
SOX2-OT-233ENST00000600778 IL1RAPL2Q9NP60 686 aa14.16□□□□□ -0.14
SOX2-OT-233ENST00000600778 PIH1D3Q9NQM4 214 aaKnown RBP14.16□□□□□ -0.14
SOX2-OT-233ENST00000600778 APBB1O00213 710 aa14.15□□□□□ -0.14
SOX2-OT-233ENST00000600778 CXCL11O14625 94 aa14.15□□□□□ -0.14
SOX2-OT-233ENST00000600778 TBC1D12O60347 775 aa14.15□□□□□ -0.14
SOX2-OT-233ENST00000600778 CTNND1O60716 968 aaKnown RBP14.15□□□□□ -0.14
SOX2-OT-233ENST00000600778 ECM2O94769 699 aaPredicted RBP14.15□□□□□ -0.14
SOX2-OT-233ENST00000600778 HOXD11P31277 338 aaPredicted RBP14.15□□□□□ -0.14
SOX2-OT-233ENST00000600778 MOGSQ13724 837 aa14.15□□□□□ -0.14
SOX2-OT-233ENST00000600778 ARHGEF6Q15052 776 aa14.15□□□□□ -0.14
SOX2-OT-233ENST00000600778 HSP90AB4PQ58FF6 505 aa14.15□□□□□ -0.14
SOX2-OT-233ENST00000600778 ADGRA1Q86SQ6 560 aa14.15□□□□□ -0.14
SOX2-OT-233ENST00000600778 AACSQ86V21 672 aa14.15□□□□□ -0.14
SOX2-OT-233ENST00000600778 RPAP2Q8IXW5 612 aaPredicted RBP14.15□□□□□ -0.14
SOX2-OT-233ENST00000600778 TGFBRAP1Q8WUH2 860 aa14.15□□□□□ -0.14
SOX2-OT-233ENST00000600778 BCL11AQ9H165 835 aa14.15□□□□□ -0.14
SOX2-OT-233ENST00000600778 ZBTB40Q9NUA8 1239 aa14.15□□□□□ -0.14
SOX2-OT-233ENST00000600778 AFG3L2Q9Y4W6 797 aa14.15□□□□□ -0.14
SOX2-OT-233ENST00000600778 NDUFB9Q9Y6M9 179 aa14.15□□□□□ -0.14
SOX2-OT-233ENST00000600778 IDH1O75874 414 aaKnown RBP14.14□□□□□ -0.15
SOX2-OT-233ENST00000600778 PPP4CP60510 307 aa14.14□□□□□ -0.15
SOX2-OT-233ENST00000600778 KIF22Q14807 665 aa14.14□□□□□ -0.15
SOX2-OT-233ENST00000600778 GPAT2Q6NUI2 795 aa14.14□□□□□ -0.15
SOX2-OT-233ENST00000600778 CCDC84Q86UT8 332 aaPredicted RBP14.14□□□□□ -0.15
SOX2-OT-233ENST00000600778 RHPN1Q8TCX5 695 aa14.14□□□□□ -0.15
SOX2-OT-233ENST00000600778 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.14□□□□□ -0.15
SOX2-OT-233ENST00000600778 CPA4Q9UI42 421 aa14.14□□□□□ -0.15
SOX2-OT-233ENST00000600778 MYO5AQ9Y4I1 1855 aaKnown RBP14.13□□□□□ -0.15
SOX2-OT-233ENST00000600778 A0A0G2JLL6 359 aaPredicted RBP14.13□□□□□ -0.15
SOX2-OT-233ENST00000600778 HMMRO75330 724 aa14.13□□□□□ -0.15
SOX2-OT-233ENST00000600778 PLCG2P16885 1265 aa14.13□□□□□ -0.15
SOX2-OT-233ENST00000600778 CYP7A1P22680 504 aa14.13□□□□□ -0.15
SOX2-OT-233ENST00000600778 DYNLL1P63167 89 aaKnown RBP14.13□□□□□ -0.15
SOX2-OT-233ENST00000600778 C17orf99Q6UX52 265 aa14.13□□□□□ -0.15
SOX2-OT-233ENST00000600778 GADL1Q6ZQY3 521 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms