RNA–Protein interactions for RNA: ENST00000600456.1

SNRPA-208, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 3

Gene SNRPA, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-208ENST00000600456 DYNLL1P63167 89 aaKnown RBP16.68■□□□□ 0.26
SNRPA-208ENST00000600456 LDLRAD1Q5T700 205 aa16.68■□□□□ 0.26
SNRPA-208ENST00000600456 RGMBQ6NW40 437 aa16.68■□□□□ 0.26
SNRPA-208ENST00000600456 EVI5LQ96CN4 794 aa16.68■□□□□ 0.26
SNRPA-208ENST00000600456 RIOK1Q9BRS2 568 aaKnown RBP16.68■□□□□ 0.26
SNRPA-208ENST00000600456 OSBPL5Q9H0X9 879 aaPredicted RBP16.68■□□□□ 0.26
SNRPA-208ENST00000600456 MKRN1Q9UHC7 482 aaKnown RBP16.68■□□□□ 0.26
SNRPA-208ENST00000600456 ANGEL1Q9UNK9 670 aaKnown RBP16.68■□□□□ 0.26
SNRPA-208ENST00000600456 UBE2Q2LH0YL09 131 aa16.67■□□□□ 0.26
SNRPA-208ENST00000600456 RNF113AO15541 343 aaKnown RBP16.67■□□□□ 0.26
SNRPA-208ENST00000600456 MOB2Q70IA6 237 aa16.67■□□□□ 0.26
SNRPA-208ENST00000600456 ZSCAN29Q8IWY8 852 aaPredicted RBP16.67■□□□□ 0.26
SNRPA-208ENST00000600456 ZFPM1Q8IX07 1006 aa16.67■□□□□ 0.26
SNRPA-208ENST00000600456 CCDC102AQ96A19 550 aa16.67■□□□□ 0.26
SNRPA-208ENST00000600456 FSD1Q9BTV5 496 aa16.67■□□□□ 0.26
SNRPA-208ENST00000600456 DHX36Q9H2U1 1008 aaKnown RBP16.67■□□□□ 0.26
SNRPA-208ENST00000600456 USP2O75604 605 aaPredicted RBP16.66■□□□□ 0.26
SNRPA-208ENST00000600456 PRKG1Q13976 671 aa16.66■□□□□ 0.26
SNRPA-208ENST00000600456 PAXIP1Q6ZW49 1069 aaPredicted RBP16.66■□□□□ 0.26
SNRPA-208ENST00000600456 SH3BP5LQ7L8J4 393 aa16.66■□□□□ 0.26
SNRPA-208ENST00000600456 TGFBRAP1Q8WUH2 860 aa16.66■□□□□ 0.26
SNRPA-208ENST00000600456 APPBP2Q92624 585 aa16.66■□□□□ 0.26
SNRPA-208ENST00000600456 CCDC136Q96JN2 1154 aa16.66■□□□□ 0.26
SNRPA-208ENST00000600456 CAPNS2Q96L46 248 aa16.66■□□□□ 0.26
SNRPA-208ENST00000600456 CSRNP1Q96S65 589 aa16.66■□□□□ 0.26
SNRPA-208ENST00000600456 CRNKL1Q9BZJ0 848 aaKnown RBP16.66■□□□□ 0.26
SNRPA-208ENST00000600456 FLT1P17948 1338 aa16.66■□□□□ 0.26
SNRPA-208ENST00000600456 PDE4AP27815 886 aa16.65■□□□□ 0.26
SNRPA-208ENST00000600456 USP5P45974 858 aa16.65■□□□□ 0.26
SNRPA-208ENST00000600456 VEGFBP49765 207 aa16.65■□□□□ 0.26
SNRPA-208ENST00000600456 ZNF157P51786 506 aaPredicted RBP16.65■□□□□ 0.26
SNRPA-208ENST00000600456 CYP4F22Q6NT55 531 aa16.65■□□□□ 0.26
SNRPA-208ENST00000600456 ANKRD13AQ8IZ07 590 aa16.65■□□□□ 0.26
SNRPA-208ENST00000600456 ZNF341Q9BYN7 854 aa16.65■□□□□ 0.26
SNRPA-208ENST00000600456 WDR33Q9C0J8 1336 aaKnown RBP16.65■□□□□ 0.26
SNRPA-208ENST00000600456 DDTLA6NHG4 134 aaPredicted RBP16.64■□□□□ 0.25
SNRPA-208ENST00000600456 MBD4O95243 580 aa16.64■□□□□ 0.25
SNRPA-208ENST00000600456 MAP3K10Q02779 954 aa16.64■□□□□ 0.25
SNRPA-208ENST00000600456 MAPKAPK5Q8IW41 473 aa16.64■□□□□ 0.25
SNRPA-208ENST00000600456 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.64■□□□□ 0.253e-7■□□□□ 8
SNRPA-208ENST00000600456 AIDAQ96BJ3 306 aa16.64■□□□□ 0.25
SNRPA-208ENST00000600456 CEP350Q5VT06 3117 aa16.64■□□□□ 0.25
SNRPA-208ENST00000600456 TBC1D12O60347 775 aa16.63■□□□□ 0.25
SNRPA-208ENST00000600456 SLC10A3P09131 477 aa16.63■□□□□ 0.25
SNRPA-208ENST00000600456 MAP3K9P80192 1104 aa16.63■□□□□ 0.25
SNRPA-208ENST00000600456 NOGQ13253 232 aa16.63■□□□□ 0.25
SNRPA-208ENST00000600456 SLFNL1Q499Z3 407 aa16.63■□□□□ 0.25
SNRPA-208ENST00000600456 LCORLQ8N3X6 602 aa16.63■□□□□ 0.25
SNRPA-208ENST00000600456 JMYQ8N9B5 988 aa16.63■□□□□ 0.25
SNRPA-208ENST00000600456 PUS7LQ9H0K6 701 aaKnown RBP16.63■□□□□ 0.25
SNRPA-208ENST00000600456 ARMT1Q9H993 441 aa16.63■□□□□ 0.25
SNRPA-208ENST00000600456 PI4KBQ9UBF8 816 aa16.63■□□□□ 0.25
SNRPA-208ENST00000600456 FZD1Q9UP38 647 aa16.63■□□□□ 0.25
SNRPA-208ENST00000600456 MYH7P12883 1935 aa16.62■□□□□ 0.25
SNRPA-208ENST00000600456 TRIM6-TRIM34B2RNG4 842 aa16.62■□□□□ 0.25
SNRPA-208ENST00000600456 CHGBP05060 677 aa16.62■□□□□ 0.25
SNRPA-208ENST00000600456 HLA-DOAP06340 250 aa16.62■□□□□ 0.25
SNRPA-208ENST00000600456 MAP2K2P36507 400 aa16.62■□□□□ 0.25
SNRPA-208ENST00000600456 MIGA2Q7L4E1 593 aa16.62■□□□□ 0.25
SNRPA-208ENST00000600456 RASAL3Q86YV0 1011 aa16.62■□□□□ 0.25
SNRPA-208ENST00000600456 SLC10A4Q96EP9 437 aa16.62■□□□□ 0.25
SNRPA-208ENST00000600456 WRNIP1Q96S55 665 aa16.62■□□□□ 0.25
SNRPA-208ENST00000600456 ATP8A2Q9NTI2 1148 aa16.62■□□□□ 0.25
SNRPA-208ENST00000600456 HERC5Q9UII4 1024 aaKnown RBP16.62■□□□□ 0.25
SNRPA-208ENST00000600456 ZNF112Q9UJU3 913 aa16.62■□□□□ 0.25
SNRPA-208ENST00000600456 CSADQ9Y600 493 aa16.62■□□□□ 0.25
SNRPA-208ENST00000600456 FOCADQ5VW36 1801 aa16.61■□□□□ 0.25
SNRPA-208ENST00000600456 FAM155AB1AL88 458 aaPredicted RBP16.61■□□□□ 0.25
SNRPA-208ENST00000600456 GNAT2P19087 354 aa16.61■□□□□ 0.25
SNRPA-208ENST00000600456 ZMYM1Q5SVZ6 1142 aa16.61■□□□□ 0.25
SNRPA-208ENST00000600456 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.61■□□□□ 0.25
SNRPA-208ENST00000600456 TTC6Q86TZ1 520 aa16.61■□□□□ 0.25
SNRPA-208ENST00000600456 FOXP4Q8IVH2 680 aaPredicted RBP16.61■□□□□ 0.25
SNRPA-208ENST00000600456 OSBP2Q969R2 916 aa16.61■□□□□ 0.25
SNRPA-208ENST00000600456 DDRGK1Q96HY6 314 aa16.61■□□□□ 0.25
SNRPA-208ENST00000600456 STRBPQ96SI9 672 aaKnown RBP16.61■□□□□ 0.25
SNRPA-208ENST00000600456 THSD7BQ9C0I4 1608 aa16.6■□□□□ 0.25
SNRPA-208ENST00000600456 GRM1Q13255 1194 aa16.6■□□□□ 0.25
SNRPA-208ENST00000600456 VGLL4Q14135 290 aa16.6■□□□□ 0.25
SNRPA-208ENST00000600456 TTC22Q5TAA0 569 aa16.6■□□□□ 0.25
SNRPA-208ENST00000600456 METTL16Q86W50 562 aaKnown RBP16.6■□□□□ 0.25
SNRPA-208ENST00000600456 RILPL2Q969X0 211 aa16.6■□□□□ 0.25
SNRPA-208ENST00000600456 CLMNQ96JQ2 1002 aa16.6■□□□□ 0.25
SNRPA-208ENST00000600456 EHD4Q9H223 541 aa16.6■□□□□ 0.25
SNRPA-208ENST00000600456 DCP1AQ9NPI6 582 aaPredicted RBP16.6■□□□□ 0.25
SNRPA-208ENST00000600456 PPP4R2Q9NY27 417 aa16.6■□□□□ 0.25
SNRPA-208ENST00000600456 TAOK2Q9UL54 1235 aa16.6■□□□□ 0.25
SNRPA-208ENST00000600456 PALD1Q9ULE6 856 aa16.6■□□□□ 0.25
SNRPA-208ENST00000600456 SLC4A4Q9Y6R1 1079 aa16.6■□□□□ 0.25
SNRPA-208ENST00000600456 GPAA1O43292 621 aa16.59■□□□□ 0.25
SNRPA-208ENST00000600456 ZBTB48P10074 688 aaPredicted RBP16.59■□□□□ 0.25
SNRPA-208ENST00000600456 NOL9Q5SY16 702 aaKnown RBP16.59■□□□□ 0.25
SNRPA-208ENST00000600456 REM2Q8IYK8 340 aaPredicted RBP16.59■□□□□ 0.25
SNRPA-208ENST00000600456 SDR42E1Q8WUS8 393 aa16.59■□□□□ 0.25
SNRPA-208ENST00000600456 TRIM34Q9BYJ4 488 aa16.59■□□□□ 0.25
SNRPA-208ENST00000600456 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.59■□□□□ 0.25
SNRPA-208ENST00000600456 HELLSQ9NRZ9 838 aa16.59■□□□□ 0.25
SNRPA-208ENST00000600456 SAP30BPQ9UHR5 308 aaKnown RBP16.59■□□□□ 0.25
SNRPA-208ENST00000600456 CDK5RAP2Q96SN8 1893 aa16.59■□□□□ 0.25
SNRPA-208ENST00000600456 PHF20L1A8MW92 1017 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms