RNA–Protein interactions for RNA: ENST00000600137.5

VRK3-219, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 822 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-219ENST00000600137 TICAM2Q86XR7 235 aa16.6■□□□□ 0.25
VRK3-219ENST00000600137 TGFBRAP1Q8WUH2 860 aa16.6■□□□□ 0.25
VRK3-219ENST00000600137 APPBP2Q92624 585 aa16.6■□□□□ 0.25
VRK3-219ENST00000600137 FSD1Q9BTV5 496 aa16.6■□□□□ 0.25
VRK3-219ENST00000600137 OSBPL5Q9H0X9 879 aaPredicted RBP16.6■□□□□ 0.25
VRK3-219ENST00000600137 ARMT1Q9H993 441 aa16.6■□□□□ 0.25
VRK3-219ENST00000600137 ZNF408Q9H9D4 720 aa16.6■□□□□ 0.25
VRK3-219ENST00000600137 GBA2Q9HCG7 927 aaPredicted RBP16.6■□□□□ 0.25
VRK3-219ENST00000600137 TLL2Q9Y6L7 1015 aa16.6■□□□□ 0.25
VRK3-219ENST00000600137 PRKAB2O43741 272 aa16.59■□□□□ 0.25
VRK3-219ENST00000600137 SDSP20132 328 aa16.59■□□□□ 0.25
VRK3-219ENST00000600137 PICALMQ13492 652 aa16.59■□□□□ 0.25
VRK3-219ENST00000600137 MAP3K11Q16584 847 aa16.59■□□□□ 0.25
VRK3-219ENST00000600137 SUPT20HL1Q3ZLR7 823 aa16.59■□□□□ 0.25
VRK3-219ENST00000600137 LDLRAD1Q5T700 205 aa16.59■□□□□ 0.25
VRK3-219ENST00000600137 CERS3Q8IU89 383 aa16.59■□□□□ 0.25
VRK3-219ENST00000600137 DNAJC5GQ8N7S2 189 aa16.59■□□□□ 0.25
VRK3-219ENST00000600137 STRBPQ96SI9 672 aaKnown RBP16.59■□□□□ 0.25
VRK3-219ENST00000600137 NOL10Q9BSC4 688 aaKnown RBP16.59■□□□□ 0.25
VRK3-219ENST00000600137 SIPA1L1O43166 1804 aa16.59■□□□□ 0.25
VRK3-219ENST00000600137 M0R2C6 588 aa16.58■□□□□ 0.24
VRK3-219ENST00000600137 MBD4O95243 580 aa16.58■□□□□ 0.24
VRK3-219ENST00000600137 MAPKAPK5Q8IW41 473 aa16.58■□□□□ 0.24
VRK3-219ENST00000600137 FLT1P17948 1338 aa16.58■□□□□ 0.24
VRK3-219ENST00000600137 COL2A1P02458 1487 aaPredicted RBP16.58■□□□□ 0.24
VRK3-219ENST00000600137 PAPPA2Q9BXP8 1791 aa16.58■□□□□ 0.24
VRK3-219ENST00000600137 AK9Q5TCS8 1911 aa16.58■□□□□ 0.24
VRK3-219ENST00000600137 RASSF10A6NK89 507 aa16.57■□□□□ 0.24
VRK3-219ENST00000600137 TRIM6-TRIM34B2RNG4 842 aa16.57■□□□□ 0.24
VRK3-219ENST00000600137 UBE2Q2LH0YL09 131 aa16.57■□□□□ 0.24
VRK3-219ENST00000600137 FKBP1BP68106 108 aa16.57■□□□□ 0.24
VRK3-219ENST00000600137 METTL16Q86W50 562 aaKnown RBP16.57■□□□□ 0.24
VRK3-219ENST00000600137 C2orf69Q8N8R5 385 aa16.57■□□□□ 0.24
VRK3-219ENST00000600137 RILPL2Q969X0 211 aa16.57■□□□□ 0.24
VRK3-219ENST00000600137 FAM227BQ96M60 508 aa16.57■□□□□ 0.24
VRK3-219ENST00000600137 MYH1P12882 1939 aa16.57■□□□□ 0.24
VRK3-219ENST00000600137 DDX60LQ5H9U9 1706 aaKnown RBP16.56■□□□□ 0.24
VRK3-219ENST00000600137 FOXP2O15409 715 aa16.56■□□□□ 0.24
VRK3-219ENST00000600137 PRKG1Q13976 671 aa16.56■□□□□ 0.24
VRK3-219ENST00000600137 SDR42E1Q8WUS8 393 aa16.56■□□□□ 0.24
VRK3-219ENST00000600137 KLRG1Q96E93 195 aa16.56■□□□□ 0.24
VRK3-219ENST00000600137 DCP1AQ9NPI6 582 aaPredicted RBP16.56■□□□□ 0.24
VRK3-219ENST00000600137 ZNF112Q9UJU3 913 aa16.56■□□□□ 0.24
VRK3-219ENST00000600137 A0A0D9SFI3 127 aa16.55■□□□□ 0.24
VRK3-219ENST00000600137 GSG1L2A8MUP6 293 aa16.55■□□□□ 0.24
VRK3-219ENST00000600137 GPAA1O43292 621 aa16.55■□□□□ 0.24
VRK3-219ENST00000600137 NF2P35240 595 aa16.55■□□□□ 0.24
VRK3-219ENST00000600137 EVX2Q03828 476 aa16.55■□□□□ 0.24
VRK3-219ENST00000600137 NMIQ13287 307 aaPredicted RBP16.55■□□□□ 0.24
VRK3-219ENST00000600137 LRRFIP1Q32MZ4 808 aaKnown RBP16.55■□□□□ 0.24
VRK3-219ENST00000600137 MIGA2Q7L4E1 593 aa16.55■□□□□ 0.24
VRK3-219ENST00000600137 AIDAQ96BJ3 306 aa16.55■□□□□ 0.24
VRK3-219ENST00000600137 HHIPL1Q96JK4 782 aa16.55■□□□□ 0.24
VRK3-219ENST00000600137 CRNKL1Q9BZJ0 848 aaKnown RBP16.55■□□□□ 0.24
VRK3-219ENST00000600137 PALD1Q9ULE6 856 aa16.55■□□□□ 0.24
VRK3-219ENST00000600137 ANGEL1Q9UNK9 670 aaKnown RBP16.55■□□□□ 0.24
VRK3-219ENST00000600137 BAZ2AQ9UIF9 1905 aaKnown RBP16.55■□□□□ 0.24
VRK3-219ENST00000600137 PHF20L1A8MW92 1017 aa16.54■□□□□ 0.24
VRK3-219ENST00000600137 SMIM22K7EJ46 135 aa16.54■□□□□ 0.24
VRK3-219ENST00000600137 TBC1D12O60347 775 aa16.54■□□□□ 0.24
VRK3-219ENST00000600137 HUNKP57058 714 aa16.54■□□□□ 0.24
VRK3-219ENST00000600137 DEFB115Q30KQ5 88 aa16.54■□□□□ 0.24
VRK3-219ENST00000600137 CCDC129Q6ZRS4 1044 aa16.54■□□□□ 0.24
VRK3-219ENST00000600137 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.54■□□□□ 0.24
VRK3-219ENST00000600137 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.54■□□□□ 0.24
VRK3-219ENST00000600137 CSRNP1Q96S65 589 aa16.54■□□□□ 0.24
VRK3-219ENST00000600137 IL25Q9H293 177 aa16.54■□□□□ 0.24
VRK3-219ENST00000600137 HELLSQ9NRZ9 838 aa16.54■□□□□ 0.24
VRK3-219ENST00000600137 ATP8A2Q9NTI2 1148 aa16.54■□□□□ 0.24
VRK3-219ENST00000600137 OTOFQ9HC10 1997 aa16.53■□□□□ 0.24
VRK3-219ENST00000600137 PPP1R12BO60237 982 aaPredicted RBP16.53■□□□□ 0.24
VRK3-219ENST00000600137 USP5P45974 858 aa16.53■□□□□ 0.24
VRK3-219ENST00000600137 PLCD1P51178 756 aa16.53■□□□□ 0.24
VRK3-219ENST00000600137 RRP1BQ14684 758 aaKnown RBP16.53■□□□□ 0.24
VRK3-219ENST00000600137 DHX36Q9H2U1 1008 aaKnown RBP16.53■□□□□ 0.24
VRK3-219ENST00000600137 DNAJC18Q9H819 358 aa16.53■□□□□ 0.24
VRK3-219ENST00000600137 EPB41L4AQ9HCS5 686 aaPredicted RBP16.53■□□□□ 0.24
VRK3-219ENST00000600137 SAP30BPQ9UHR5 308 aaKnown RBP16.53■□□□□ 0.24
VRK3-219ENST00000600137 ABT1Q9ULW3 272 aaKnown RBP16.53■□□□□ 0.24
VRK3-219ENST00000600137 SLC4A4Q9Y6R1 1079 aa16.53■□□□□ 0.24
VRK3-219ENST00000600137 UNCXA6NJT0 531 aa16.52■□□□□ 0.24
VRK3-219ENST00000600137 FAM196BA6NMK8 535 aa16.52■□□□□ 0.24
VRK3-219ENST00000600137 FAM155AB1AL88 458 aaPredicted RBP16.52■□□□□ 0.24
VRK3-219ENST00000600137 PATL2C9JE40 543 aaKnown RBP16.52■□□□□ 0.24
VRK3-219ENST00000600137 ARMC9Q7Z3E5 817 aa16.52■□□□□ 0.24
VRK3-219ENST00000600137 ZNF589Q86UQ0 364 aaPredicted RBP16.52■□□□□ 0.24
VRK3-219ENST00000600137 ZSCAN29Q8IWY8 852 aaPredicted RBP16.52■□□□□ 0.24
VRK3-219ENST00000600137 CLMNQ96JQ2 1002 aa16.52■□□□□ 0.24
VRK3-219ENST00000600137 PI4KBQ9UBF8 816 aa16.52■□□□□ 0.24
VRK3-219ENST00000600137 NAV1Q8NEY1 1877 aa16.52■□□□□ 0.23
VRK3-219ENST00000600137 CYP2D6P10635 497 aa16.51■□□□□ 0.23
VRK3-219ENST00000600137 CHMLP26374 656 aa16.51■□□□□ 0.23
VRK3-219ENST00000600137 INPP5BP32019 993 aa16.51■□□□□ 0.23
VRK3-219ENST00000600137 MAP3K9P80192 1104 aa16.51■□□□□ 0.23
VRK3-219ENST00000600137 GABPAQ06546 454 aa16.51■□□□□ 0.23
VRK3-219ENST00000600137 MCMDC2Q4G0Z9 681 aa16.51■□□□□ 0.23
VRK3-219ENST00000600137 BMP2KLQ5H9B9 411 aa16.51■□□□□ 0.23
VRK3-219ENST00000600137 VPS53Q5VIR6 699 aa16.51■□□□□ 0.23
VRK3-219ENST00000600137 RGMBQ6NW40 437 aa16.51■□□□□ 0.23
VRK3-219ENST00000600137 CTR9Q6PD62 1173 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 182.9 ms